BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017845
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ...   158   2e-36
ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-...   150   6e-34
ref|NP_566112.1| uncharacterized protein [Arabidopsis thaliana] ...   149   7e-34
ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arab...   148   2e-33
gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|203...   147   3e-33

>ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera]
           gi|147792791|emb|CAN71033.1| hypothetical protein
           VITISV_000355 [Vitis vinifera]
          Length = 218

 Score =  158 bits (400), Expect = 2e-36
 Identities = 86/227 (37%), Positives = 136/227 (59%), Gaps = 3/227 (1%)
 Frame = -2

Query: 879 QTLKRPSNRFYASIKPSNLSFRTQRIPPPLKASL--SPQTLKPQFLSNPSQSPNPIFKST 706
           QT  +P ++ Y++   ++++ +    P PLK +L  SP+ L+P+  S PS          
Sbjct: 14  QTPLKPLHQPYSA---ASITAQLPNFPHPLKPTLQISPRPLRPR--SRPS---------- 58

Query: 705 AKPNKITCNATYEIVPATDRLISIVSYFIPFLGGLSYGYHLFSALPILERAFDPLVPLLG 526
                     +Y  VPAT+RLIS  +Y +PF  GL YG  L    P L    +P++P+L 
Sbjct: 59  -------ITMSYSAVPATERLISAAAYCLPFFNGLQYGRFLLMQYPALGLVLEPILPILS 111

Query: 525 FYKSIPGANFLTFFGLYVGIVRDRKFSRYVRFNALQAXXXXXXXXXXXXLHIVFSYGE-G 349
            Y+SIP A+F+ FF LY+G+VR+  FSR+VRFN++QA            ++ +F+ G  G
Sbjct: 112 LYRSIPYASFVAFFALYLGVVRNPSFSRFVRFNSMQAVVLDVLLVVPLLVNRIFNPGRAG 171

Query: 348 LGFKIVQLTHSAVFVVILACFLYTLGICLLGKTPHFPYVTDAMDSRL 208
           +GF+++ + H+A+FV ++ACFLY+LG C+LG+TP+ P+V DA   +L
Sbjct: 172 VGFRLMVMGHNAIFVFVVACFLYSLGFCILGRTPYLPFVADAAGRQL 218


>ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus]
           gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC
           20-II, chloroplastic-like [Cucumis sativus]
          Length = 208

 Score =  150 bits (378), Expect = 6e-34
 Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 1/208 (0%)
 Frame = -2

Query: 843 SIKPSNLSFRTQRIPPPLKASLSPQTLKPQFLSNPSQSPNPIFKSTAKPNKITCNATYEI 664
           SI   NLS +T      ++A+L P +     + +   S  P   S + P       +Y  
Sbjct: 5   SIPLLNLSAKTS-----IRAALFPHS---SAIKSRHHSSLPFLPSKS-PKFTPIRMSYNP 55

Query: 663 VPATDRLISIVSYFIPFLGGLSYGYHLFSALPILERAFDPLVPLLGFYKSIPGANFLTFF 484
            PATDRLIS V+Y +PF   L YG  LF+  P L  AF+PL+P+LG Y+SIP ++F+ FF
Sbjct: 56  TPATDRLISAVAYTLPFFNSLQYGRFLFAQYPALGFAFEPLLPILGLYRSIPHSSFVAFF 115

Query: 483 GLYVGIVRDRKFSRYVRFNALQAXXXXXXXXXXXXLHIVFSYG-EGLGFKIVQLTHSAVF 307
            LY+G+VR+  F+ YVRFN++QA            +  + S G  G+GFKI+  +H+ +F
Sbjct: 116 ALYLGVVRNPSFNHYVRFNSMQAVTLDVLLVVPLLIQRILSPGRSGIGFKIMVWSHNGLF 175

Query: 306 VVILACFLYTLGICLLGKTPHFPYVTDA 223
           V  + CFLY++  CLLG+TPH P V DA
Sbjct: 176 VFSVLCFLYSVVSCLLGRTPHLPIVADA 203


>ref|NP_566112.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75100577|sp|O82251.1|TI202_ARATH RecName:
           Full=Protein TIC 20-II, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-II; Short=AtTIC20-II; Flags: Precursor
           gi|3738296|gb|AAC63638.1| expressed protein [Arabidopsis
           thaliana] gi|330255801|gb|AEC10895.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 208

 Score =  149 bits (377), Expect = 7e-34
 Identities = 82/193 (42%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
 Frame = -2

Query: 780 LSPQTLKPQFLSNPSQSPNPIFKSTAKPNKITCNATYEIVPATDRLISIVSYFIPFLGGL 601
           LS    +P  LS P  S   I  S+ +   +T  A+Y   PAT+R+ISI SY +PF   L
Sbjct: 16  LSAPRCRPLSLSFPGSSTFSIRPSSRRATALTTRASYTPTPATERVISIASYALPFFNSL 75

Query: 600 SYGYHLFSALPILERAFDPLVPLLGFYKSIPGANFLTFFGLYVGIVRDRKFSRYVRFNAL 421
            YG  LF+  P L   F+P+ P+L  Y+S+P A+F+ FFGLY+G+VR+  FSRYVRFNA+
Sbjct: 76  QYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSFSRYVRFNAM 135

Query: 420 QAXXXXXXXXXXXXLHIVFSYGEGLGF--KIVQLTHSAVFVVILACFLYTLGICLLGKTP 247
           QA            L  +   G+G GF  K +   H+ VFV    CF+Y +   LLGKTP
Sbjct: 136 QAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSFMCFVYGVVSSLLGKTP 195

Query: 246 HFPYVTDAMDSRL 208
           + P+V DA   +L
Sbjct: 196 YIPFVADAAGRQL 208


>ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp.
           lyrata] gi|297327974|gb|EFH58394.1| hypothetical protein
           ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score =  148 bits (373), Expect = 2e-33
 Identities = 80/187 (42%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
 Frame = -2

Query: 762 KPQFLSNPSQSPNPIFKSTAKPNKITCNATYEIVPATDRLISIVSYFIPFLGGLSYGYHL 583
           +P  LS P  S   I  S  +   +T  A+Y   PAT+R+ISI SY +PF   L YG  L
Sbjct: 23  RPLSLSFPGSSTVSIRPSGRRATAVTTRASYTPTPATERVISIASYALPFFNSLQYGRFL 82

Query: 582 FSALPILERAFDPLVPLLGFYKSIPGANFLTFFGLYVGIVRDRKFSRYVRFNALQAXXXX 403
           F+  P L   F+P+ P+L  Y+S+P A+F+ FFGLY+G+VR+   SRYVRFNA+QA    
Sbjct: 83  FAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSLSRYVRFNAMQAVTLD 142

Query: 402 XXXXXXXXLHIVFSYGEGLGF--KIVQLTHSAVFVVILACFLYTLGICLLGKTPHFPYVT 229
                   L  +   G+G GF  K +   H+ VFV    CF+Y +  CLLGKTP+ P+V 
Sbjct: 143 VLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSSMCFVYGVVSCLLGKTPYIPFVA 202

Query: 228 DAMDSRL 208
           DA   +L
Sbjct: 203 DAAGRQL 209


>gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana]
           gi|20334890|gb|AAM16201.1| At2g47840/F17A22.23
           [Arabidopsis thaliana]
          Length = 208

 Score =  147 bits (372), Expect = 3e-33
 Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
 Frame = -2

Query: 780 LSPQTLKPQFLSNPSQSPNPIFKSTAKPNKITCNATYEIVPATDRLISIVSYFIPFLGGL 601
           LS    +P  LS P  S      S+ +   +T  A+Y   PAT+R+ISI SY +PF   L
Sbjct: 16  LSAPRCRPLSLSFPGSSTFSTRPSSRRATALTTRASYTPTPATERVISIASYALPFFNSL 75

Query: 600 SYGYHLFSALPILERAFDPLVPLLGFYKSIPGANFLTFFGLYVGIVRDRKFSRYVRFNAL 421
            YG  LF+  P L   F+P+ P+L  Y+S+P A+F+ FFGLY+G+VR+  FSRYVRFNA+
Sbjct: 76  QYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSFSRYVRFNAM 135

Query: 420 QAXXXXXXXXXXXXLHIVFSYGEGLGF--KIVQLTHSAVFVVILACFLYTLGICLLGKTP 247
           QA            L  +   G+G GF  K +   H+ VFV    CF+Y +   LLGKTP
Sbjct: 136 QAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSFMCFVYGVVSSLLGKTP 195

Query: 246 HFPYVTDAMDSRL 208
           + P+V DA   +L
Sbjct: 196 YIPFVADAAGRQL 208