BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017820
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   196   5e-48
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   196   5e-48
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   194   2e-47
ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein S...   192   8e-47

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  197 bits (500), Expect = 2e-48
 Identities = 97/102 (95%), Positives = 101/102 (99%)
 Frame = -3

Query: 625 NADRMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLD 446
           ++ +MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLD
Sbjct: 27  HSPKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLD 86

Query: 445 HLSVRGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 320
           HLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRPM
Sbjct: 87  HLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 128


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  196 bits (497), Expect = 5e-48
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = -3

Query: 613 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 434
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 60

Query: 433 RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 320
           RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM
Sbjct: 61  RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  196 bits (497), Expect = 5e-48
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = -3

Query: 613 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 434
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 433 RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 320
           RGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRPM
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  194 bits (493), Expect = 2e-47
 Identities = 95/98 (96%), Positives = 98/98 (100%)
 Frame = -3

Query: 613 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 434
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 433 RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 320
           RGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRP+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98


>ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
           sativus] gi|449476727|ref|XP_004154817.1| PREDICTED:
           small nuclear ribonucleoprotein Sm D1-like [Cucumis
           sativus]
          Length = 114

 Score =  192 bits (487), Expect = 8e-47
 Identities = 94/98 (95%), Positives = 97/98 (98%)
 Frame = -3

Query: 613 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 434
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNPVT+DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSV 60

Query: 433 RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 320
           RGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRP+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98