BLASTX nr result

ID: Cimicifuga21_contig00017817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017817
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313377.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
emb|CAN78823.1| hypothetical protein VITISV_006555 [Vitis vinifera]   129   5e-28
ref|XP_002323584.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_004166865.1| PREDICTED: uncharacterized protein LOC101231...   107   1e-21
ref|XP_004145314.1| PREDICTED: uncharacterized protein LOC101203...   107   1e-21

>ref|XP_002313377.1| predicted protein [Populus trichocarpa] gi|222849785|gb|EEE87332.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  143 bits (361), Expect = 2e-32
 Identities = 82/182 (45%), Positives = 117/182 (64%), Gaps = 8/182 (4%)
 Frame = +2

Query: 65  SMKTTFTSSFDANICSSQYSNTVGCFSTILRRFLCSGSFRTHPFDCVKEKGRQGVEFDPR 244
           S+ ++ TSSFD N+C+S+ S T  C + +LRR LCS S  THP D + E      +   +
Sbjct: 8   SISSSSTSSFDPNMCTSK-SATASCLTGLLRRILCSRSLPTHPSDQITETSSILCDGRHQ 66

Query: 245 NDLKSEEKIKEAFVTPGVVARLMGLETMPKLNSVPTKRTRKDSIGRSRSVSAVDYWFELD 424
             +KS EK++    TPGVVARLMGLE+ P+ +SV   R   +SI RSRS+++V++  E D
Sbjct: 67  ELIKSNEKLETTAATPGVVARLMGLESFPETSSVDM-RISANSISRSRSMNSVEFRGESD 125

Query: 425 PTQMQHRRVKSSSSFQEMPSFLQQEDDEFLVLSFENV--------HEAKEADIGCAELKQ 580
             Q QHRRV S+ SF+EMP+FL+ E+ E+ VLSFEN+         + ++ D+G  ELK+
Sbjct: 126 QMQGQHRRVNSTLSFREMPTFLEVENKEYFVLSFENIGSESKRVRSKERKCDVGSGELKE 185

Query: 581 KR 586
           KR
Sbjct: 186 KR 187


>emb|CAN78823.1| hypothetical protein VITISV_006555 [Vitis vinifera]
          Length = 458

 Score =  129 bits (324), Expect = 5e-28
 Identities = 73/167 (43%), Positives = 112/167 (67%), Gaps = 7/167 (4%)
 Frame = +2

Query: 104 ICSSQYSNTVGCFSTILRRFLCSGSFRTHPFDCVKEKGRQGVEFDPRNDLKSEEKIKEAF 283
           +C+S+ + T GCF+++LRR LCSGS  THP D +++ G   V F    +LK+ EK+ E  
Sbjct: 1   MCNSRNA-TAGCFASVLRRLLCSGSLPTHPSDHIRDSGL--VVFGKDENLKAGEKM-EGV 56

Query: 284 VTPGVVARLMGLETMPKLNSVPTKRTRKDSIGRSRSVSAVDYWFELDPTQMQHRRVKSSS 463
            TPG+VARLMGL++MP++N V   + + +SI RSRS++++D W + +  Q +HRRVKSS 
Sbjct: 57  ATPGIVARLMGLDSMPEINLV-CSQIKGNSIVRSRSMNSMDCWPDSEAMQGKHRRVKSSL 115

Query: 464 SFQEMPSFLQQEDDEFLVLSFENVHEAK-------EADIGCAELKQK 583
           SF+E P F + E++E+L+LSF N  E K       + ++G   L+Q+
Sbjct: 116 SFRETPVFFEMENEEYLLLSFGNEGETKKLRQKERKCEMGSGGLRQR 162


>ref|XP_002323584.1| predicted protein [Populus trichocarpa] gi|222868214|gb|EEF05345.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  109 bits (273), Expect = 4e-22
 Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
 Frame = +2

Query: 110 SSQYSNTVGCFSTILRRFLCSGSFRTHPFDC----VKEKGRQGVEFDPRNDLKSEEKIKE 277
           S  +++  GCFS I+R  LC GS +THP D     +  +    V+ DP+  + +  +   
Sbjct: 2   SHSHNSGSGCFSGIVRLLLCRGSHQTHPSDQRVEPITPEFFNHVKKDPKTGIDANVEAPG 61

Query: 278 AFVTPGVVARLMGLETMPKLNSVPTKRTRKDSIGRSRSVSAVDYWFELDPTQMQHRRVKS 457
           +  TPGVVARLMGL+++P  N VP  R+  +S+ RSRSV+ +DY  +LD  Q QHRRV++
Sbjct: 62  S-TTPGVVARLMGLDSLPDTNRVPRGRSNPESVTRSRSVNFMDYLLQLDLAQAQHRRVRT 120

Query: 458 SSSFQEMPSFLQQEDDEFLVLSFENVHEAKEADIGCAELKQK 583
           S SF+E+P+ + QE+ +  VL  ++  + K   +G  + K +
Sbjct: 121 SVSFREVPALMNQENHDVYVLYLDD-QDKKPKKMGSKQRKSE 161


>ref|XP_004166865.1| PREDICTED: uncharacterized protein LOC101231276 [Cucumis sativus]
          Length = 402

 Score =  107 bits (268), Expect = 1e-21
 Identities = 64/168 (38%), Positives = 108/168 (64%), Gaps = 6/168 (3%)
 Frame = +2

Query: 65  SMKTTFTSS-FDANICSSQYSN-TVGCFSTILRRFLCSGSFRTHPFDCVKEKGRQGVEFD 238
           S  ++F+SS FDA+IC+ + +  T  C S ILRR LCSGS  THP D + E+    V+ D
Sbjct: 10  SSSSSFSSSTFDAHICNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITEE-TSSVKSD 68

Query: 239 PR----NDLKSEEKIKEAFVTPGVVARLMGLETMPKLNSVPTKRTRKDSIGRSRSVSAVD 406
            +     DL   +   E   T G+VARLMGL++MP++      +   +SI RS+S+++V+
Sbjct: 69  DKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEM------KQHHNSILRSQSMNSVE 122

Query: 407 YWFELDPTQMQHRRVKSSSSFQEMPSFLQQEDDEFLVLSFENVHEAKE 550
           ++++  P   +H++ +S+ SF+E+P+FL+ E++++ +LSFE   ++KE
Sbjct: 123 HFYK--PLDNKHQQFRSTKSFREVPTFLELENEDYFILSFEGERKSKE 168


>ref|XP_004145314.1| PREDICTED: uncharacterized protein LOC101203493 [Cucumis sativus]
           gi|449471494|ref|XP_004153325.1| PREDICTED:
           uncharacterized protein LOC101223236 [Cucumis sativus]
           gi|449472675|ref|XP_004153664.1| PREDICTED:
           uncharacterized protein LOC101204261 [Cucumis sativus]
          Length = 402

 Score =  107 bits (268), Expect = 1e-21
 Identities = 63/170 (37%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
 Frame = +2

Query: 59  AISMKTTFTSS-FDANICSSQYSN-TVGCFSTILRRFLCSGSFRTHPFDCVKEKGRQGVE 232
           + S  ++F+SS FDA++C+ + +  T  C S ILRR LCSGS  THP D + E+    V+
Sbjct: 8   SFSSSSSFSSSTFDAHVCNPRAAAATPSCLSGILRRILCSGSLPTHPTDHITEE-TSSVK 66

Query: 233 FDPR----NDLKSEEKIKEAFVTPGVVARLMGLETMPKLNSVPTKRTRKDSIGRSRSVSA 400
            D +     DL   +   E   T G+VARLMGL++MP++      +   +SI RS+S+++
Sbjct: 67  SDDKVLHAKDLNVIKSTNETKATAGIVARLMGLDSMPEM------KQHHNSILRSQSMNS 120

Query: 401 VDYWFELDPTQMQHRRVKSSSSFQEMPSFLQQEDDEFLVLSFENVHEAKE 550
           V+++++  P   +H++ +S+ SF+E+P+FL+ E++++ +LSFE   ++KE
Sbjct: 121 VEHFYK--PLDNKHQQFRSTKSFREVPTFLELENEDYFILSFEGERKSKE 168


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