BLASTX nr result

ID: Cimicifuga21_contig00017807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017807
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281319.1| PREDICTED: uncharacterized protein LOC100255...   180   7e-43
ref|NP_200707.1| uncharacterized protein [Arabidopsis thaliana] ...   166   8e-39
ref|NP_568770.1| uncharacterized protein [Arabidopsis thaliana] ...   166   1e-38
ref|XP_002298331.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37
ref|XP_002864604.1| hypothetical protein ARALYDRAFT_496025 [Arab...   161   3e-37

>ref|XP_002281319.1| PREDICTED: uncharacterized protein LOC100255366 [Vitis vinifera]
          Length = 158

 Score =  180 bits (456), Expect = 7e-43
 Identities = 90/146 (61%), Positives = 106/146 (72%), Gaps = 7/146 (4%)
 Frame = -3

Query: 993 LANRAAMERTFGLFKQSFNLFRTFSA------SAIPASPNAEEASXXXXXXXXXXXKNLF 832
           LANRA+ +RT+ L +QSF  FR+FSA      S++ +SPN   +             NLF
Sbjct: 6   LANRASTDRTWNLLRQSFRFFRSFSAAPSASSSSVASSPNPTASKKPKRRKKK----NLF 61

Query: 831 EVVQFLPNWGIGYQMAKTHWVGISYQITKINLYKDGRHGKAWGIVHKDGLPAADAPKKIS 652
           EV QFLPNWG+GY MAKTHW G+SY+ITKINLYKDGRHGKAWG+VHKDGL AADAPKKIS
Sbjct: 62  EVAQFLPNWGLGYHMAKTHWTGVSYEITKINLYKDGRHGKAWGLVHKDGLLAADAPKKIS 121

Query: 651 GVHKRGWKYIP-IKRTVESTPKVEVE 577
           GVHKR W+YIP  K+T E TP   V+
Sbjct: 122 GVHKRCWRYIPSSKKTEEKTPSPSVQ 147


>ref|NP_200707.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759230|dbj|BAB09642.1| unnamed protein product
           [Arabidopsis thaliana] gi|15450824|gb|AAK96683.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148679|gb|AAM10230.1| unknown protein [Arabidopsis
           thaliana] gi|332009744|gb|AED97127.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 148

 Score =  166 bits (421), Expect = 8e-39
 Identities = 89/144 (61%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
 Frame = -3

Query: 993 LANRA-AMERTFGLFKQSFNLFRTFSASAIPAS-PNAEEASXXXXXXXXXXXKNLFEVVQ 820
           L NRA +   T G F  S +L R FSA+   AS P +E  S           KNL EV Q
Sbjct: 5   LMNRAISRTETVGAFSLSLSLLRNFSAAPSAASTPASENPSSDSNKPKRRKKKNLIEVAQ 64

Query: 819 FLPNWGIGYQMAKTHWVGISYQITKINLYKDGRHGKAWGIVHKDGLPAADAPKKISGVHK 640
           FLPNWGIGY MAK HW GISY+ITKINLYKDGRHGKAWGIVHKDGL AA+APKKISGVHK
Sbjct: 65  FLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHK 124

Query: 639 RGWKYIP-IKRTVESTPKVEVEAA 571
           R WKYIP + +T  +T   +V+AA
Sbjct: 125 RCWKYIPNLSKTTPATTTADVQAA 148


>ref|NP_568770.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177403|dbj|BAB10534.1| unnamed protein product
           [Arabidopsis thaliana] gi|14334578|gb|AAK59468.1|
           unknown protein [Arabidopsis thaliana]
           gi|17104517|gb|AAL34147.1| unknown protein [Arabidopsis
           thaliana] gi|332008823|gb|AED96206.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 142

 Score =  166 bits (419), Expect = 1e-38
 Identities = 85/143 (59%), Positives = 99/143 (69%), Gaps = 2/143 (1%)
 Frame = -3

Query: 993 LANRA-AMERTFGLFKQSFNLFRTFSASAIPASPNAEEASXXXXXXXXXXXKNLFEVVQF 817
           L NRA +   T G F+ S NL R FSA+    +P+++ +             NL EV QF
Sbjct: 5   LINRAISRTETVGAFRLSLNLLRNFSAAPASENPSSDSSKPKRRKKK-----NLIEVAQF 59

Query: 816 LPNWGIGYQMAKTHWVGISYQITKINLYKDGRHGKAWGIVHKDGLPAADAPKKISGVHKR 637
           LPNWGIGY MAK HW GISY+ITKINLYKDGRHGKAWGIVHKDGL AA+APKKISGVHKR
Sbjct: 60  LPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHKR 119

Query: 636 GWKYIP-IKRTVESTPKVEVEAA 571
            WKYIP + +T  +T    V+AA
Sbjct: 120 CWKYIPNLSKTAPATTSAHVQAA 142


>ref|XP_002298331.1| predicted protein [Populus trichocarpa] gi|222845589|gb|EEE83136.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  161 bits (408), Expect = 3e-37
 Identities = 90/159 (56%), Positives = 105/159 (66%), Gaps = 16/159 (10%)
 Frame = -3

Query: 999 SILANRAAME---RTFGLFKQSF-NLFRTFSASAIPASPNAEEASXXXXXXXXXXXKNLF 832
           S++A RAA+    +T  LF+ SF NL +TFS S+  +S  AE              KNLF
Sbjct: 4   SLVAKRAAVSAPNQTLSLFRLSFCNLLKTFSTSS-SSSAAAENPKNETSKPKRRKKKNLF 62

Query: 831 EVVQFLPNWGIGYQMAKTHWVGISYQITKINLYKDGRHGKAWGIVHKDGLPAAD-APKKI 655
           EV QFLPNWGIGY MAK+HW  +SY+ITKINLYKDGRHGKAWGI HKDGLP AD APKKI
Sbjct: 63  EVAQFLPNWGIGYHMAKSHWANVSYEITKINLYKDGRHGKAWGIAHKDGLPIADAAPKKI 122

Query: 654 SGVHKRGWKYIP-----------IKRTVESTPKVEVEAA 571
           SGVHKR WKYIP             ++ E+  K EV+AA
Sbjct: 123 SGVHKRCWKYIPSLAKSIEGKASSPKSTETASKTEVQAA 161


>ref|XP_002864604.1| hypothetical protein ARALYDRAFT_496025 [Arabidopsis lyrata subsp.
            lyrata] gi|297310439|gb|EFH40863.1| hypothetical protein
            ARALYDRAFT_496025 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score =  161 bits (407), Expect = 3e-37
 Identities = 82/137 (59%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
 Frame = -3

Query: 1002 MSILANRAAMERTFGLFKQSFNLFRTFSASAIPASPNAEEASXXXXXXXXXXXKNLFEVV 823
            M+++    +   T G F+ S NL R FSA+     P +E  S           KNL EV 
Sbjct: 1    MTLMKRAISRTETVGAFRLSLNLLRNFSAA-----PASENPSSDANKPKRRKKKNLIEVA 55

Query: 822  QFLPNWGIGYQMAKTHWVGISYQITKINLYKDGRHGKAWGIVHKDGLPAADAPKKISGVH 643
            QFLPNWGIGY MAK HW GISY+ITKINLYKDGRHGKAWGIVHKDGL AA+APKKISGVH
Sbjct: 56   QFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVH 115

Query: 642  KRGWKYIP-IKRTVEST 595
            KR WKYIP + +T  +T
Sbjct: 116  KRCWKYIPNLSKTAPAT 132


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