BLASTX nr result

ID: Cimicifuga21_contig00017776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017776
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, puta...   283   5e-74
ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera] gi|2...   278   2e-72
ref|XP_003517014.1| PREDICTED: cyclin-U2-1-like [Glycine max]         271   2e-70

>ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|222842988|gb|EEE80535.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  288 bits (738), Expect = 1e-75
 Identities = 142/208 (68%), Positives = 172/208 (82%)
 Frame = -2

Query: 998 DLYSFSSYQDDSNSNMPLVISVLASLLERNMARNERITRKCTLALSKDVRILAFECHETL 819
           DLYS+S YQ+DSN+  PLVISVLASL+ER MARNERI + CT ALSKD+R   F+CHET 
Sbjct: 16  DLYSYS-YQNDSNT--PLVISVLASLIERTMARNERIVKNCTWALSKDIRTRVFDCHETP 72

Query: 818 EMTTQSFLERIYRYIRVAPPIYVVAYIYIDRLCQIHPEFRITSANVHRLLITTIMVASKF 639
           ++T QS+LER++RY R  P +YVVAY+YIDR CQ +P FRI S NVHRLLITTIMVASK+
Sbjct: 73  DLTIQSYLERVFRYTRAGPSVYVVAYVYIDRFCQANPGFRINSRNVHRLLITTIMVASKY 132

Query: 638 VEDMNYRNSYFARVGGLATKEMNELEVDFLFLMGFKLHVNVSIFDSYCRHLEREVSIGGG 459
           VEDMNYRNSYFARVGGL T E+N+LE++F+FLMGFKLHVNVS+F+SYC HLEREV IGGG
Sbjct: 133 VEDMNYRNSYFARVGGLTTNELNKLELEFVFLMGFKLHVNVSVFESYCCHLEREVGIGGG 192

Query: 458 YQIERTLWSMCSKGIKTNDSEKRDLKQL 375
           Y IE+TL   C++ IK+   E++   Q+
Sbjct: 193 YHIEKTL--RCAEEIKSGQQEEKRYNQI 218


>ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|222861482|gb|EEE99024.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  285 bits (730), Expect = 1e-74
 Identities = 141/208 (67%), Positives = 170/208 (81%)
 Frame = -2

Query: 998 DLYSFSSYQDDSNSNMPLVISVLASLLERNMARNERITRKCTLALSKDVRILAFECHETL 819
           DLYS+S YQ+DSN+  PLVI+VLASL+ER MARNERI + CT ALSKD R   F+CHET 
Sbjct: 16  DLYSYS-YQNDSNT--PLVIAVLASLIERTMARNERIVKNCTWALSKDTRTRVFDCHETP 72

Query: 818 EMTTQSFLERIYRYIRVAPPIYVVAYIYIDRLCQIHPEFRITSANVHRLLITTIMVASKF 639
           ++T QS+LERI+RY R  P +YVVAY+YIDR CQ +PEFRI + NVHRLLITTIMVASK+
Sbjct: 73  DLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQANPEFRINARNVHRLLITTIMVASKY 132

Query: 638 VEDMNYRNSYFARVGGLATKEMNELEVDFLFLMGFKLHVNVSIFDSYCRHLEREVSIGGG 459
           VEDMNYRNSYFARVGGL    MN++E++FLFLMGFKLHVNVS+F+SYC HLEREV IGGG
Sbjct: 133 VEDMNYRNSYFARVGGLTANVMNKMELEFLFLMGFKLHVNVSVFESYCCHLEREVGIGGG 192

Query: 458 YQIERTLWSMCSKGIKTNDSEKRDLKQL 375
           Y IE+TL   C++ IK+   E++   Q+
Sbjct: 193 YHIEKTL--RCAEEIKSRQQEEKGYNQI 218


>ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
           gi|223548828|gb|EEF50317.1| Nuc-1 negative regulatory
           protein preg, putative [Ricinus communis]
          Length = 224

 Score =  283 bits (724), Expect = 5e-74
 Identities = 140/209 (66%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
 Frame = -2

Query: 998 DLYSFSSYQDDSNSNMPLVISVLASLLERNMARNERITRKCTLALSKDVRILAFECHETL 819
           DLYS+S YQ+DS+  +PLVISVLASL+ER MARNERI + C+ ALSKD++   F+C+ET 
Sbjct: 16  DLYSYS-YQNDSS--IPLVISVLASLIERTMARNERIAKNCSWALSKDIKTRVFDCYETP 72

Query: 818 EMTTQSFLERIYRYIRVAPPIYVVAYIYIDRLCQIHPEFRITSANVHRLLITTIMVASKF 639
           +MT QS+LERI+RY R  P +YVVAY+YIDR CQ +P FRI++ NVHRLLITT+MVASK+
Sbjct: 73  DMTIQSYLERIFRYTRTGPSVYVVAYVYIDRFCQANPGFRISARNVHRLLITTVMVASKY 132

Query: 638 VEDMNYRNSYFARVGGLATKEMNELEVDFLFLMGFKLHVNVSIFDSYCRHLEREVSIGGG 459
           VEDMNYRNSYFARVGGL T E+N+LE++FLF+MGFK+HVNVS+F+SYC HLEREVSIGGG
Sbjct: 133 VEDMNYRNSYFARVGGLTTNELNKLELEFLFMMGFKMHVNVSVFESYCSHLEREVSIGGG 192

Query: 458 YQIERTLWSMCSKGIKTNDSE-KRDLKQL 375
           Y IE+TL   C++ IK+  +E KR + Q+
Sbjct: 193 YHIEKTL--RCAEEIKSGQTEDKRYINQI 219


>ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera]
           gi|297734540|emb|CBI16591.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  278 bits (711), Expect = 2e-72
 Identities = 141/203 (69%), Positives = 168/203 (82%)
 Frame = -2

Query: 998 DLYSFSSYQDDSNSNMPLVISVLASLLERNMARNERITRKCTLALSKDVRILAFECHETL 819
           DLYS+S YQ+DSN+  PLVISVLASL+ER MARNERI +     LS+ +R   F+CHET 
Sbjct: 22  DLYSYS-YQEDSNT--PLVISVLASLIERTMARNERIAKNSPRGLSRYLRTGVFDCHETP 78

Query: 818 EMTTQSFLERIYRYIRVAPPIYVVAYIYIDRLCQIHPEFRITSANVHRLLITTIMVASKF 639
           +MT QS+LERI+RY R  P +YVVAY+YIDR CQI+P FRI+++NVH LLITTIMVASK+
Sbjct: 79  DMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQINPGFRISASNVHGLLITTIMVASKY 138

Query: 638 VEDMNYRNSYFARVGGLATKEMNELEVDFLFLMGFKLHVNVSIFDSYCRHLEREVSIGGG 459
           VEDMNYRNSY+ARVGGL T EMNELEV+FLFLMGFKLHVNVS+F+SYC HLEREVSIGGG
Sbjct: 139 VEDMNYRNSYYARVGGLTTNEMNELEVEFLFLMGFKLHVNVSVFESYCSHLEREVSIGGG 198

Query: 458 YQIERTLWSMCSKGIKTNDSEKR 390
           Y IE+TL   C++ IK+    +R
Sbjct: 199 YHIEKTL--RCAEEIKSRQIVER 219


>ref|XP_003517014.1| PREDICTED: cyclin-U2-1-like [Glycine max]
          Length = 224

 Score =  271 bits (694), Expect = 2e-70
 Identities = 137/208 (65%), Positives = 169/208 (81%)
 Frame = -2

Query: 998 DLYSFSSYQDDSNSNMPLVISVLASLLERNMARNERITRKCTLALSKDVRILAFECHETL 819
           DLYS+S Y++DSN+  PLVI+VLASL+ER+MAR +RI + C+ ALSK +    F+C E  
Sbjct: 17  DLYSYS-YKEDSNT--PLVINVLASLIERSMARTQRIVKNCSNALSKVISTNIFDCREIP 73

Query: 818 EMTTQSFLERIYRYIRVAPPIYVVAYIYIDRLCQIHPEFRITSANVHRLLITTIMVASKF 639
           +MT +S+LERI+RY R  P +YVVAY+YIDR CQ +P FRI + NVHRLLITTIMVASK+
Sbjct: 74  DMTIESYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKY 133

Query: 638 VEDMNYRNSYFARVGGLATKEMNELEVDFLFLMGFKLHVNVSIFDSYCRHLEREVSIGGG 459
           VEDMN+RNSYFARVGGL T E+NELE++FLFLMGFKLHVNVS+F+SYC HLEREVSIGGG
Sbjct: 134 VEDMNFRNSYFARVGGLRTNELNELELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGG 193

Query: 458 YQIERTLWSMCSKGIKTNDSEKRDLKQL 375
           Y IERTL   C++ IK  + E+R   Q+
Sbjct: 194 YHIERTL--RCAEEIKAKNIEERGYTQI 219


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