BLASTX nr result

ID: Cimicifuga21_contig00017754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017754
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26402.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002263294.1| PREDICTED: uncharacterized protein LOC100242...   112   4e-23
emb|CAN81607.1| hypothetical protein VITISV_020360 [Vitis vinifera]   100   2e-19
ref|XP_002305038.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_004137399.1| PREDICTED: uncharacterized protein LOC101214...    83   3e-14

>emb|CBI26402.3| unnamed protein product [Vitis vinifera]
          Length = 171

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   KPKSGIRQQDLLKNIVEIRPKRHRVSSPSGRNQRSPVSSARAVTNQKAESDPNKVFSS-- 175
           KPKSGIRQQDLLK +VE++PKRHRVSSPS  NQ +P SS  A+ N K+E D  K   S  
Sbjct: 80  KPKSGIRQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHKSEVDQLKAGESPL 139

Query: 176 SRPNKGEAEAKSENPVRSLLGLAYESSEDEED 271
           SR  K E   K+ENPV+SLLGLAYESS+DE+D
Sbjct: 140 SRSKKAEDATKAENPVKSLLGLAYESSDDEDD 171


>ref|XP_002263294.1| PREDICTED: uncharacterized protein LOC100242649 [Vitis vinifera]
          Length = 205

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   KPKSGIRQQDLLKNIVEIRPKRHRVSSPSGRNQRSPVSSARAVTNQKAESDPNKVFSS-- 175
           KPKSGIRQQDLLK +VE++PKRHRVSSPS  NQ +P SS  A+ N K+E D  K   S  
Sbjct: 114 KPKSGIRQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHKSEVDQLKAGESPL 173

Query: 176 SRPNKGEAEAKSENPVRSLLGLAYESSEDEED 271
           SR  K E   K+ENPV+SLLGLAYESS+DE+D
Sbjct: 174 SRSKKAEDATKAENPVKSLLGLAYESSDDEDD 205


>emb|CAN81607.1| hypothetical protein VITISV_020360 [Vitis vinifera]
          Length = 300

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = +2

Query: 20  RQQDLLKNIVEIRPKRHRVSSPSGRNQRSPVSSARAVTNQKAESDPNKVFSS--SRPNKG 193
           RQQDLLK +VE++PKRHRVSSPS  NQ +P SS  A+ N K+E D  K   S  SR  K 
Sbjct: 215 RQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHKSEVDQLKAGESPLSRSKKA 274

Query: 194 EAEAKSENPVRSLLGLAYESSEDEED 271
           E   K+ENPV+SLLGLAYESS+DE+D
Sbjct: 275 EDATKAENPVKSLLGLAYESSDDEDD 300


>ref|XP_002305038.1| predicted protein [Populus trichocarpa] gi|222848002|gb|EEE85549.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   KPKSGIRQQDLLKNIVEIRPKRHRVSSPSGRNQRSPVSSARAVTNQ-KAESDPNKVFSSS 178
           KPKSGIRQQDLLK +VE++PKR +VS+ S  N  SP+SS RA  N+ K   +  +   +S
Sbjct: 109 KPKSGIRQQDLLKKVVEVKPKRPKVSNSSDGNYSSPISSDRASDNKIKVNQEKKEHIPAS 168

Query: 179 RPNKGEAEAKS---ENPVRSLLGLAYESSEDEED 271
              +GE   K+   ENPV+SLLGLAY SS++EED
Sbjct: 169 SKPEGETNVKNEAEENPVKSLLGLAYASSDEEED 202


>ref|XP_004137399.1| PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus]
           gi|449507134|ref|XP_004162942.1| PREDICTED:
           uncharacterized protein LOC101230871 [Cucumis sativus]
          Length = 194

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   KPKSGIRQQDLLKNIVEIRPKRHRVSSPSGRNQRSPVSSARAVTNQKAESDPNKVFSSS- 178
           KPKSGIRQQDLLK +VE++PKR RVS+ +             ++N K ++D  KV     
Sbjct: 114 KPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPKHDNDNEKVKEKPL 161

Query: 179 -RPNKGEAEAKSENPVRSLLGLAYESSEDEED 271
            + NK E E ++ENPV+SLLGLAY SS+D+ED
Sbjct: 162 VKTNKTEGETEAENPVKSLLGLAYASSDDDED 193


Top