BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017749
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    86   1e-14
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    83   7e-14
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    82   9e-14
ref|XP_003626501.1| F-box/LRR-repeat protein [Medicago truncatul...    79   8e-13
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               79   1e-12

>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = +2

Query: 308 NLKDWISEMPDEILSFTLSLMPMREAARTSILSHRWRYLWKTSVA---FSSSLNLDVLAM 478
           N+ + IS++P+++L   LS + M+EAARTSILS RWR+LW        F +SL +  L +
Sbjct: 30  NISEHISQLPEDVLLNILSRLTMKEAARTSILSTRWRHLWTYYTGIMDFDASLTMWYLQL 89

Query: 479 RGGDYRDNMFSVFVRGSRGIEFMDDNRLLLIERNKFIKWVNLILQLDYSPRIDSFRLRFY 658
             G                      ++ L +ER+ F+ WVN +L+    P ++  R+ F 
Sbjct: 90  GLG----------------------SKSLDMERHSFVSWVNQVLRSHEGPTMEGLRICFD 127

Query: 659 FKKDFSHLIDQWVNVAIAKRLPNIDID 739
              DF + ID W+ +A+ KR+  ++ID
Sbjct: 128 LDSDFMYEIDSWITIAMQKRVKRLEID 154


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 48/141 (34%), Positives = 74/141 (52%)
 Frame = +2

Query: 317 DWISEMPDEILSFTLSLMPMREAARTSILSHRWRYLWKTSVAFSSSLNLDVLAMRGGDYR 496
           D IS +P +IL F LSL+P++EAARTS LSH+WR LW    +F   LN D          
Sbjct: 45  DSISHLPQDILVFILSLLPLKEAARTSTLSHKWRCLW----SFIPCLNFDA--------- 91

Query: 497 DNMFSVFVRGSRGIEFMDDNRLLLIERNKFIKWVNLILQLDYSPRIDSFRLRFYFKKDFS 676
                   +    ++F D+N  L  ER +F+KWVN ++       +++ R+RF     F 
Sbjct: 92  -------HKKLLDLQFTDEN--LKSERRQFVKWVNRVIDSYKGSNLETLRIRFNLDSSFQ 142

Query: 677 HLIDQWVNVAIAKRLPNIDID 739
             +D+WV  A+  +L   +++
Sbjct: 143 CDVDRWVQFAMQWKLKMFELN 163


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
 Frame = +2

Query: 314  KDWISEMPDEILSFTLSLMPMREAARTSILSHRWRYLWKTSVAFSSSLNLDVLAMRG-GD 490
            +DW+ E+PD+ILS  +SL+P++EA RT ILS RWR +W       S L  D  ++ G GD
Sbjct: 1317 EDWLVELPDDILSTIISLLPLKEAVRTGILSKRWRSIW----TCHSELWFDAASVLGIGD 1372

Query: 491  YRDNMFSVFVRGSRGIEFMDDNRLLLIERNKFIKWVNLILQLDY----SPRIDSFRLRFY 658
               +              M  N+  L  + +  K+V  + Q  Y     P+I+SF + F 
Sbjct: 1373 CSXS--------------MSGNQPELNSQMQSXKFVERVDQFMYYRSQGPKINSFSIHFP 1418

Query: 659  FKKDFSHLIDQWVNVAIAKRLPNIDID 739
              K+F   IDQW+  A+ K + NID+D
Sbjct: 1419 LGKEFMSHIDQWITCAVMKGVENIDLD 1445


>ref|XP_003626501.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355501516|gb|AES82719.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 488

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 46/142 (32%), Positives = 81/142 (57%)
 Frame = +2

Query: 311 LKDWISEMPDEILSFTLSLMPMREAARTSILSHRWRYLWKTSVAFSSSLNLDVLAMRGGD 490
           ++D ISE+ D+ILS+ L+++ M++  +TSILS RW  LW    A    L  D+  M G +
Sbjct: 1   MEDRISELSDDILSYILTMLSMKDLFKTSILSRRWCNLW----ALRKDLFFDIF-MLGSN 55

Query: 491 YRDNMFSVFVRGSRGIEFMDDNRLLLIERNKFIKWVNLILQLDYSPRIDSFRLRFYFKKD 670
             D + S ++     +  +D    L +  ++F+K VN  ++     +IDSF + FY    
Sbjct: 56  EDDLLQSGYLIEVPSVSTVDRYVDLNLCTDEFVKLVNQFVKKFQGTKIDSFLVNFYINSK 115

Query: 671 FSHLIDQWVNVAIAKRLPNIDI 736
            +++IDQW++ AIA+ +  +D+
Sbjct: 116 HNNIIDQWISFAIARGVVKVDL 137


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
 Frame = +2

Query: 314 KDWISEMPDEILSFTLSLMPMREAARTSILSHRWRYLWKTSVAFSSSLNLDVLAMRG-GD 490
           +DW+ E+PD+ILS  +SL+P++EA RT ILS RWR +W       S L  D  ++ G GD
Sbjct: 15  EDWLVELPDDILSTIISLLPLKEAVRTGILSKRWRSIW----TCHSELWFDAASVLGIGD 70

Query: 491 YRDNMFSVFVRGSRGIEFMDDNRLLLIERNKFIKWVNLILQLDY----SPRIDSFRLRFY 658
              +              M  N+  L  + +  K+V  + Q  Y      +I+SF + F 
Sbjct: 71  CSTS--------------MSGNQPELNSQMQSSKFVERVDQFMYYRSQGRKINSFSIHFP 116

Query: 659 FKKDFSHLIDQWVNVAIAKRLPNIDID 739
             K+F   IDQW+  A+ K + NID+D
Sbjct: 117 LGKEFMSHIDQWITCAVMKGVENIDLD 143