BLASTX nr result

ID: Cimicifuga21_contig00017738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017738
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vit...    71   8e-11
ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vitis vinifera]
           gi|225469308|ref|XP_002269782.1| PREDICTED: ycf20-like
           protein isoform 1 [Vitis vinifera]
           gi|297741124|emb|CBI31855.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = -1

Query: 185 MAHALSLVSPCIIRHSLALRKNVPRGRFGVLTRKTSPRYLTVRAVQENEGPRRLVDIIRF 6
           MAH+LSL S C+++  LA    V  G+  +L  ++SPR+ +V+AVQENEGPRRLVDIIR 
Sbjct: 1   MAHSLSLPSTCLLKFGLATGTRVSHGKCSMLASRSSPRFFSVQAVQENEGPRRLVDIIRI 60

Query: 5   V 3
           V
Sbjct: 61  V 61


>ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|222859517|gb|EEE97064.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = -1

Query: 185 MAHALSLVSPCIIRHSLALRKNVPRGRFGVLTRKTSPRYLTVRAVQENEGPRRLVDIIRF 6
           MA ++SL++ C ++   A ++ V   ++G    ++S   L +RAVQENEGPRRL+DIIR 
Sbjct: 1   MAQSVSLITTCPLKLGFAPQRRVSSVKYGTSVFRSSTGRLRIRAVQENEGPRRLIDIIRT 60

Query: 5   V 3
           +
Sbjct: 61  I 61


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