BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017720
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, ch...   140   8e-32
gb|AEK26371.1| chloroplast photosystem II subunit [Sedum alfredii]    140   1e-31
ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, ch...   140   1e-31
ref|XP_003526631.1| PREDICTED: photosystem II 22 kDa protein, ch...   139   2e-31
ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277 [Popu...   139   2e-31

>ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 273

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/75 (93%), Positives = 72/75 (96%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGVPINE+EPLVLFNV+FFFIAA
Sbjct: 198 TKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAA 257

Query: 218 LNPGNGKFVTDEDED 262
           LNPG GKFVTDE ED
Sbjct: 258 LNPGTGKFVTDEGED 272



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK NELFVGR+A LGFA SL+GE ITGKG LAQLN+ETG+P+ E EPL+LF ++F  + A
Sbjct: 97  TKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPLYEAEPLLLFFILFTLLGA 156

Query: 218 LN--PGNGKFVTDE 253
           +      GKFV DE
Sbjct: 157 IGGLGDRGKFVDDE 170


>gb|AEK26371.1| chloroplast photosystem II subunit [Sedum alfredii]
          Length = 273

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/75 (90%), Positives = 73/75 (97%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE+EPLVLFNV+FFF AA
Sbjct: 199 TKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVIFFFFAA 258

Query: 218 LNPGNGKFVTDEDED 262
           LNPG GKFVTD++ED
Sbjct: 259 LNPGTGKFVTDDEED 273



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK NELFVGR+A +GFA S++GE +TGKG LAQLN+ETG+PI E EPL+LF ++F  + A
Sbjct: 95  TKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGA 154

Query: 218 LNP--GNGKFVTD 250
           +      G+FV D
Sbjct: 155 IGALGDRGRFVDD 167


>ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449529497|ref|XP_004171736.1|
           PREDICTED: photosystem II 22 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 272

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/75 (92%), Positives = 73/75 (97%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE+EPLVL NVVFFFIAA
Sbjct: 197 TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA 256

Query: 218 LNPGNGKFVTDEDED 262
           +NPG GKFVTDE++D
Sbjct: 257 VNPGTGKFVTDEEDD 271



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK NELFVGR+A +GFA S++GE ITGKG LAQLN+ETG+PI E EPL+LF ++F  + A
Sbjct: 91  TKQNELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGA 150

Query: 218 LNP--GNGKFVTDED 256
           +      GKF+ D +
Sbjct: 151 IGALGDRGKFIDDPE 165


>ref|XP_003526631.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 273

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGVPINE+EPLVLFNV+FFFIAA
Sbjct: 198 TKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAA 257

Query: 218 LNPGNGKFVTDEDED 262
           LNPG GKFVTD+ ED
Sbjct: 258 LNPGTGKFVTDDGED 272



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK NELFVGR+A LGFA SL+GE ITGKG LAQLN+ETG+PI E EPL+LF ++F  + A
Sbjct: 97  TKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGA 156

Query: 218 LN--PGNGKFVTDE 253
           +      GKFV DE
Sbjct: 157 IGGLGDRGKFVDDE 170


>ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277 [Populus trichocarpa]
           gi|118488707|gb|ABK96164.1| unknown [Populus
           trichocarpa] gi|222842713|gb|EEE80260.1| hypothetical
           protein POPTRDRAFT_816277 [Populus trichocarpa]
          Length = 272

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/75 (89%), Positives = 73/75 (97%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+P+NE+EPLVLFNV+FFFIAA
Sbjct: 198 TKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPVNEIEPLVLFNVLFFFIAA 257

Query: 218 LNPGNGKFVTDEDED 262
           LNPG GKFVTDEDE+
Sbjct: 258 LNPGTGKFVTDEDEE 272



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = +2

Query: 38  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVVFFFIAA 217
           TK NELFVGR+A +GFA SL+GE ITGKG L+QLN+ETG+PI E EPL+LF ++F  + A
Sbjct: 94  TKQNELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGA 153

Query: 218 LNP--GNGKFVTD 250
           +      G+FV D
Sbjct: 154 IGALGDRGRFVDD 166