BLASTX nr result

ID: Cimicifuga21_contig00017716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017716
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   143   5e-32
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   142   9e-32
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   142   9e-32
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   142   9e-32
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   141   2e-31

>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  143 bits (360), Expect = 5e-32
 Identities = 77/170 (45%), Positives = 105/170 (61%)
 Frame = -1

Query: 526 ESFFVSLDESVTSQVKLGNGKLXXXXXXXXXXXXXXXGNSRLIHDVFYVPGLTQSLLSVG 347
           +S F  LDES   +VKLG+ K                GN +L+++V+++P LTQ+LLSVG
Sbjct: 306 KSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVG 365

Query: 346 KLFQRGYTIKFDNNECQILDKRHM*LVAKISMTPNKVFPLHMPSIQNYSLTADKIDDSIL 167
           +L   GY+I FD + C I DK+   ++  + M  NK+FPL + SI+ ++L   +  +S L
Sbjct: 366 QLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIEKHALVVKETSESNL 425

Query: 166 WH*RYGHLNYKSLKLLKEKNMVIGLPPIEHEEKVCEGCIYGKFHRFSFVK 17
           WH RYGHLN K LKLL +K MV GLP I+    VCEGCIYGK  +  F K
Sbjct: 426 WHLRYGHLNVKGLKLLSKKEMVFGLPKID-SVNVCEGCIYGKQSKKPFPK 474


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  142 bits (358), Expect = 9e-32
 Identities = 77/170 (45%), Positives = 104/170 (61%)
 Frame = -1

Query: 526 ESFFVSLDESVTSQVKLGNGKLXXXXXXXXXXXXXXXGNSRLIHDVFYVPGLTQSLLSVG 347
           +S F  LDES   +VKLG+ K                GN +L+++V+++P LTQ+LLSVG
Sbjct: 320 KSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVG 379

Query: 346 KLFQRGYTIKFDNNECQILDKRHM*LVAKISMTPNKVFPLHMPSIQNYSLTADKIDDSIL 167
           +L   GY+I FD   C I DK+   ++  + M  NK+FPL + SI+ ++L   +  +S L
Sbjct: 380 QLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVKETSESNL 439

Query: 166 WH*RYGHLNYKSLKLLKEKNMVIGLPPIEHEEKVCEGCIYGKFHRFSFVK 17
           WH RYGHLN K LKLL +K MV GLP I+    VCEGCIYGK  +  F K
Sbjct: 440 WHLRYGHLNVKGLKLLSKKEMVFGLPKID-SVNVCEGCIYGKQSKKPFPK 488


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  142 bits (358), Expect = 9e-32
 Identities = 77/170 (45%), Positives = 104/170 (61%)
 Frame = -1

Query: 526 ESFFVSLDESVTSQVKLGNGKLXXXXXXXXXXXXXXXGNSRLIHDVFYVPGLTQSLLSVG 347
           +S F  LDES   +VKLG+ K                GN +L+++V+++P LTQ+LLSVG
Sbjct: 305 KSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVG 364

Query: 346 KLFQRGYTIKFDNNECQILDKRHM*LVAKISMTPNKVFPLHMPSIQNYSLTADKIDDSIL 167
           +L   GY+I FD   C I DK+   ++  + M  NK+FPL + SI+ ++L   +  +S L
Sbjct: 365 QLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNL 424

Query: 166 WH*RYGHLNYKSLKLLKEKNMVIGLPPIEHEEKVCEGCIYGKFHRFSFVK 17
           WH RYGHLN K LKLL +K MV GLP I+    VCEGCIYGK  +  F K
Sbjct: 425 WHLRYGHLNVKGLKLLSKKEMVFGLPKID-SVNVCEGCIYGKQSKKPFPK 473


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  142 bits (358), Expect = 9e-32
 Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
 Frame = -1

Query: 526 ESFFVSLDESVTSQVKLGNGKLXXXXXXXXXXXXXXXGNSRLIHDVFYVPGLTQSLLSVG 347
           +S F  LDES  S+V+LG+ K                GN + ++DV YVP L  +LLSVG
Sbjct: 325 KSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVG 384

Query: 346 KLFQRGYTIKFDNNECQILDKRHM*LVAKISMTPNKVFPLHMPSIQNYSLTADKIDDSIL 167
           +L   GY++ F +N C I DK     +A++ MT NK+FPL + ++ N +L   + +++ L
Sbjct: 385 QLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNETNL 444

Query: 166 WH*RYGHLNYKSLKLLKEKNMVIGLPPIEHEEKVCEGCIYGKFHRFSF-VKTSWRA 2
           WH RYGHLN   LKLL +K+MVIGLP I+ E  +CEGCIYGK  R SF V  SWRA
Sbjct: 445 WHLRYGHLNVNWLKLLVQKDMVIGLPNIK-ELDLCEGCIYGKQTRKSFPVGKSWRA 499


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  141 bits (355), Expect = 2e-31
 Identities = 76/170 (44%), Positives = 103/170 (60%)
 Frame = -1

Query: 526 ESFFVSLDESVTSQVKLGNGKLXXXXXXXXXXXXXXXGNSRLIHDVFYVPGLTQSLLSVG 347
           +S F  LDES   +VKLG+ K                GN +L+++V+++P LTQ+LLSVG
Sbjct: 254 KSLFKELDESHKLKVKLGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVG 313

Query: 346 KLFQRGYTIKFDNNECQILDKRHM*LVAKISMTPNKVFPLHMPSIQNYSLTADKIDDSIL 167
           +L   GY+I FD   C I DK+   ++  + M  NK+FPL + SI+ ++L   +  +S L
Sbjct: 314 QLMVSGYSILFDGATCVIKDKKSDQIIFDVRMAANKLFPLEVSSIEKHALVVKETSESNL 373

Query: 166 WH*RYGHLNYKSLKLLKEKNMVIGLPPIEHEEKVCEGCIYGKFHRFSFVK 17
           WH RYGHLN K LKLL +K MV GLP I+    VCEGCIYGK  +  F K
Sbjct: 374 WHLRYGHLNVKGLKLLSKKEMVFGLPKID-SVNVCEGCIYGKQSKKPFPK 422


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