BLASTX nr result

ID: Cimicifuga21_contig00017636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017636
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266816.1| PREDICTED: ABC transporter I family member 1...   124   2e-26
emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]   118   1e-24
ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|2...   116   5e-24
ref|XP_003631128.1| ABC transporter I family member [Medicago tr...   113   4e-23
dbj|BAA76420.1| multidrug resistance protein [Cicer arietinum]        110   4e-22

>ref|XP_002266816.1| PREDICTED: ABC transporter I family member 17 [Vitis vinifera]
           gi|297735429|emb|CBI17869.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  124 bits (311), Expect = 2e-26
 Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = +3

Query: 51  EPLMIDVEELE--EPKLKFQVRDLKKVLDTGVVILRGISVDXXXXXXXXXXXXXXXXKST 224
           EPL++ VEE E  E K KF+VR+L KV ++G  ILRGI VD                KST
Sbjct: 16  EPLILQVEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKST 75

Query: 225 LLRALNRLWEPASGTVFFDGQDICDLDVLHLRRKVGMLFQLPVLFEGTFPNSLRY 389
           LLR LNRLWEP SGTV+ DG DI +LDVL LRRKVGMLFQLPVLFEGT  +++RY
Sbjct: 76  LLRVLNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRY 130


>emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]
          Length = 251

 Score =  118 bits (296), Expect = 1e-24
 Identities = 64/109 (58%), Positives = 75/109 (68%)
 Frame = +3

Query: 63  IDVEELEEPKLKFQVRDLKKVLDTGVVILRGISVDXXXXXXXXXXXXXXXXKSTLLRALN 242
           ++ EE  E K KF+VR+L KV ++G  ILRGI VD                KSTLLR LN
Sbjct: 5   VEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRVLN 64

Query: 243 RLWEPASGTVFFDGQDICDLDVLHLRRKVGMLFQLPVLFEGTFPNSLRY 389
           RLWEP SGTV+ DG DI +LDVL LRRKVGMLFQLPVLFEGT  +++RY
Sbjct: 65  RLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRY 113


>ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|222866661|gb|EEF03792.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  116 bits (291), Expect = 5e-24
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
 Frame = +3

Query: 48  QEPLM-IDVEELEE-PKLKFQVRDLKKVLDTGVVILRGISVDXXXXXXXXXXXXXXXXKS 221
           QEPL+ ++VE  ++  + KF++R+L KV D GV IL GI++D                KS
Sbjct: 19  QEPLLAVNVEAAKDGAEAKFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKS 78

Query: 222 TLLRALNRLWEPASGTVFFDGQDICDLDVLHLRRKVGMLFQLPVLFEGTFPNSLRY 389
           T+LRALNRLWEP SGTVF DG D+ DLDVL  RRKVGMLFQLP LF+GT  +++RY
Sbjct: 79  TVLRALNRLWEPPSGTVFLDGHDVKDLDVLGHRRKVGMLFQLPALFDGTVADNIRY 134


>ref|XP_003631128.1| ABC transporter I family member [Medicago truncatula]
           gi|217072754|gb|ACJ84737.1| unknown [Medicago
           truncatula] gi|355525150|gb|AET05604.1| ABC transporter
           I family member [Medicago truncatula]
           gi|388494374|gb|AFK35253.1| unknown [Medicago
           truncatula]
          Length = 255

 Score =  113 bits (283), Expect = 4e-23
 Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = +3

Query: 60  MIDVEELEEPKLKFQVRDLKKVLDTGVV-ILRGISVDXXXXXXXXXXXXXXXXKSTLLRA 236
           ++DVEE ++PK+  Q+++L+K  D G + IL+GI+VD                KSTLLRA
Sbjct: 8   LLDVEEQQQPKI--QIKNLRKESDDGKLQILKGITVDIPKGMVVGIIGPSGSGKSTLLRA 65

Query: 237 LNRLWEPASGTVFFDGQDICDLDVLHLRRKVGMLFQLPVLFEGTFPNSLRY 389
           +NRLWEP S +VF DG DIC+LDVL LRRKV MLFQLP LFEGT  +++RY
Sbjct: 66  MNRLWEPPSSSVFLDGVDICNLDVLSLRRKVAMLFQLPALFEGTVADNVRY 116


>dbj|BAA76420.1| multidrug resistance protein [Cicer arietinum]
          Length = 261

 Score =  110 bits (274), Expect = 4e-22
 Identities = 60/109 (55%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = +3

Query: 66  DVEELEEPKLKFQVRDLKKVLDTGVV-ILRGISVDXXXXXXXXXXXXXXXXKSTLLRALN 242
           D EE  + K KFQ+++L+K+ D G + IL GI++D                KSTLLRALN
Sbjct: 15  DEEEDLKRKPKFQIQNLRKLSDDGKIHILNGITLDIPKGVIVGIIGPSGSGKSTLLRALN 74

Query: 243 RLWEPASGTVFFDGQDICDLDVLHLRRKVGMLFQLPVLFEGTFPNSLRY 389
           RLWEP S +VF D QDIC LDVL LRRKV MLFQLP LFEGT   ++RY
Sbjct: 75  RLWEPPSSSVFLDAQDICHLDVLSLRRKVAMLFQLPALFEGTVAENVRY 123


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