BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017634
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   184   5e-45
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   183   1e-44
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...   182   2e-44
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [S...   182   2e-44
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [S...   182   2e-44

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/149 (62%), Positives = 107/149 (71%)
 Frame = +3

Query: 6    RFAEYVATIGFSHSTSDNSLFIYCHGKDTAYILLYVDDIILTASSDSLRLGIMSKLATEF 185
            RFA +   +GF  S SDNSLF+ C+G D AY+LLYVDDIILTASS +L   I   L+ EF
Sbjct: 955  RFATFARRLGFKQSLSDNSLFVLCNGSDLAYLLLYVDDIILTASSPALLQRITKSLSLEF 1014

Query: 186  AMKDLGSLSYFLGIAVSRDKNRLFMSQSSYAEDILDRAGMSQCNPCPTPVDTKGKLSATS 365
             M D G L +FLGI V RDK+ LF+ Q +YA DIL RA M+ CNPC TPVD K KL+A  
Sbjct: 1015 EMSDQGPLHHFLGITVQRDKSSLFLHQHNYAADILHRANMTNCNPCLTPVDMKQKLAADG 1074

Query: 366  SAPYEDPTKYRRLAGALQYLTFTRPDISY 452
            S P  DPT YR LAGALQYLTFTRPDIS+
Sbjct: 1075 SPPVADPTFYRSLAGALQYLTFTRPDISF 1103


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  183 bits (464), Expect = 1e-44
 Identities = 92/150 (61%), Positives = 113/150 (75%)
 Frame = +3

Query: 3    QRFAEYVATIGFSHSTSDNSLFIYCHGKDTAYILLYVDDIILTASSDSLRLGIMSKLATE 182
            QRFA Y+  +GF+ S SD SLFIY  G + AY+LLYVDDI+LTASS SL   I ++L +E
Sbjct: 756  QRFATYICQLGFTSSASDTSLFIYKDGDNIAYLLLYVDDILLTASSTSLLQHITARLHSE 815

Query: 183  FAMKDLGSLSYFLGIAVSRDKNRLFMSQSSYAEDILDRAGMSQCNPCPTPVDTKGKLSAT 362
            FAM DLG L +FLGI+V+R  + LF+SQ  YA D+L RAGMS+C+P  TPVD + KLSA 
Sbjct: 816  FAMTDLGDLHFFLGISVTRSADGLFLSQRQYAVDLLRRAGMSECHPTATPVDARCKLSAI 875

Query: 363  SSAPYEDPTKYRRLAGALQYLTFTRPDISY 452
              AP  DPT+YR LAGALQYLT TRP+I+Y
Sbjct: 876  DGAPVSDPTEYRSLAGALQYLTLTRPEIAY 905


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/149 (60%), Positives = 108/149 (72%)
 Frame = +3

Query: 6    RFAEYVATIGFSHSTSDNSLFIYCHGKDTAYILLYVDDIILTASSDSLRLGIMSKLATEF 185
            RFA ++ T+GF  + SD SLFIY +G +TAY+LLYVDDI+LTASS+SL   I++ L  EF
Sbjct: 1474 RFAAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASLQQEF 1533

Query: 186  AMKDLGSLSYFLGIAVSRDKNRLFMSQSSYAEDILDRAGMSQCNPCPTPVDTKGKLSATS 365
            AMKDLG L +FLG+ V      L + Q  Y  DIL+RAGM+ C PC TPVDT+GKLS   
Sbjct: 1534 AMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEAE 1593

Query: 366  SAPYEDPTKYRRLAGALQYLTFTRPDISY 452
              P  DPT YR LAGALQYLTFTRPDI+Y
Sbjct: 1594 GTPVTDPTAYRSLAGALQYLTFTRPDITY 1622


>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [Sorghum bicolor]
            gi|241928093|gb|EES01238.1| hypothetical protein
            SORBIDRAFT_03g030787 [Sorghum bicolor]
          Length = 1567

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/149 (60%), Positives = 108/149 (72%)
 Frame = +3

Query: 6    RFAEYVATIGFSHSTSDNSLFIYCHGKDTAYILLYVDDIILTASSDSLRLGIMSKLATEF 185
            RFA ++ T+GF  + SD SLFIY +G +TAY+LLYVDDI+LTASS+SL   I++ L  EF
Sbjct: 1219 RFAAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASLQQEF 1278

Query: 186  AMKDLGSLSYFLGIAVSRDKNRLFMSQSSYAEDILDRAGMSQCNPCPTPVDTKGKLSATS 365
            AMKDLG L +FLG+ V      L + Q  Y  DIL+RAGM+ C PC TPVDT+GKLS   
Sbjct: 1279 AMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEAE 1338

Query: 366  SAPYEDPTKYRRLAGALQYLTFTRPDISY 452
              P  DPT YR LAGALQYLTFTRPDI+Y
Sbjct: 1339 GTPVTDPTAYRSLAGALQYLTFTRPDITY 1367


>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [Sorghum bicolor]
            gi|241923573|gb|EER96717.1| hypothetical protein
            SORBIDRAFT_02g024427 [Sorghum bicolor]
          Length = 1575

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/149 (60%), Positives = 108/149 (72%)
 Frame = +3

Query: 6    RFAEYVATIGFSHSTSDNSLFIYCHGKDTAYILLYVDDIILTASSDSLRLGIMSKLATEF 185
            RFA ++ T+GF  + SD SLFIY +G +TAY+LLYVDDI+LTASS+SL   I++ L  EF
Sbjct: 1227 RFAAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASLQQEF 1286

Query: 186  AMKDLGSLSYFLGIAVSRDKNRLFMSQSSYAEDILDRAGMSQCNPCPTPVDTKGKLSATS 365
            AMKDLG L +FLG+ V      L + Q  Y  DIL+RAGM+ C PC TPVDT+GKLS   
Sbjct: 1287 AMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEAE 1346

Query: 366  SAPYEDPTKYRRLAGALQYLTFTRPDISY 452
              P  DPT YR LAGALQYLTFTRPDI+Y
Sbjct: 1347 GTPVTDPTAYRSLAGALQYLTFTRPDITY 1375