BLASTX nr result

ID: Cimicifuga21_contig00017610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017610
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332120.1| predicted protein [Populus trichocarpa] gi|1...   100   2e-19
gb|ABK95909.1| unknown [Populus trichocarpa]                           99   3e-19
ref|XP_002330829.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002283189.1| PREDICTED: protein AIG2-like [Vitis vinifera]      94   1e-17
dbj|BAJ97204.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   3e-17

>ref|XP_002332120.1| predicted protein [Populus trichocarpa] gi|118486737|gb|ABK95204.1|
           unknown [Populus trichocarpa]
           gi|222874940|gb|EEF12071.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/65 (69%), Positives = 59/65 (90%)
 Frame = +1

Query: 49  SVMGSSTLHSVFVYGSLLADEVVSVILKRIPQSSPAILDAHHRFSIKGRVYPAIIPVQDK 228
           +++G + +H+VFVYGSLLAD+VV  +L RIPQSSPAIL+ HHRFSIKGRVYPAI+PV++K
Sbjct: 2   AMVGGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGHHRFSIKGRVYPAILPVENK 61

Query: 229 KVSGK 243
           +V+GK
Sbjct: 62  EVTGK 66


>gb|ABK95909.1| unknown [Populus trichocarpa]
          Length = 109

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/69 (66%), Positives = 59/69 (85%)
 Frame = +1

Query: 37  LEIESVMGSSTLHSVFVYGSLLADEVVSVILKRIPQSSPAILDAHHRFSIKGRVYPAIIP 216
           + + +  G + +H+VFVYGSLLAD+VV  +L RIPQSSPAIL+ +HRFSIKGRVYPAI+P
Sbjct: 1   MAMAAAAGGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILP 60

Query: 217 VQDKKVSGK 243
           V++KKVSGK
Sbjct: 61  VENKKVSGK 69


>ref|XP_002330829.1| predicted protein [Populus trichocarpa] gi|222872631|gb|EEF09762.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/62 (74%), Positives = 56/62 (90%)
 Frame = +1

Query: 58  GSSTLHSVFVYGSLLADEVVSVILKRIPQSSPAILDAHHRFSIKGRVYPAIIPVQDKKVS 237
           G + +H+VFVYGSLLAD+VV  +L RIPQSSPAIL+ +HRFSIKGRVYPAI+PV++KKVS
Sbjct: 6   GGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVS 65

Query: 238 GK 243
           GK
Sbjct: 66  GK 67


>ref|XP_002283189.1| PREDICTED: protein AIG2-like [Vitis vinifera]
          Length = 185

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
 Frame = +1

Query: 46  ESVMGSST---LHSVFVYGSLLADEVVSVILKRIPQSSPAILDAHHRFSIKGRVYPAIIP 216
           E  M SS    LH+VFVYGSLLADEVV+V+L R+PQSS A+L   HRFSIKGRVYPAI+P
Sbjct: 11  EMAMASSAPQNLHAVFVYGSLLADEVVAVLLNRVPQSSAAVLHNFHRFSIKGRVYPAILP 70

Query: 217 VQDKKVSGK 243
           V++KKV+G+
Sbjct: 71  VENKKVTGR 79


>dbj|BAJ97204.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 184

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/65 (64%), Positives = 55/65 (84%)
 Frame = +1

Query: 49  SVMGSSTLHSVFVYGSLLADEVVSVILKRIPQSSPAILDAHHRFSIKGRVYPAIIPVQDK 228
           +V+ +   HSVFVYGSL+ADEVV+ ILKR+P SSPA+L  +HRF+IKGR+YPAI+PV+ K
Sbjct: 10  AVVAAGGAHSVFVYGSLMADEVVTAILKRVPASSPALLTNYHRFNIKGRIYPAILPVESK 69

Query: 229 KVSGK 243
            V+GK
Sbjct: 70  MVAGK 74


Top