BLASTX nr result
ID: Cimicifuga21_contig00017606
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00017606 (700 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800... 61 2e-07 ref|XP_003602916.1| PHD and RING finger domain-containing protei... 59 9e-07 ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|2... 59 9e-07 >ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800660 [Glycine max] Length = 487 Score = 60.8 bits (146), Expect = 2e-07 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 5/106 (4%) Frame = +1 Query: 397 MLIPIS--SSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREA 570 MLI S SS+EA L + SDD K D+LCD +P E LKC++ D R++ + E Sbjct: 1 MLIQTSVLSSVEAGLCYVSDDGK-DVLCDRMPSGETWQVGLKCNKYPLDWCRKAEPVEED 59 Query: 571 KYNAAD---SSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQTD 699 K NA D SS LV + ST S M + PN+VY+R+KL D Sbjct: 60 KRNADDPYRSSCLVSFG---QPSTASIMTENTTPNMVYRRKKLCKD 102 >ref|XP_003602916.1| PHD and RING finger domain-containing protein [Medicago truncatula] gi|355491964|gb|AES73167.1| PHD and RING finger domain-containing protein [Medicago truncatula] Length = 475 Score = 58.9 bits (141), Expect = 9e-07 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Frame = +1 Query: 397 MLIPIS--SSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREA 570 MLI S SS+EA L + DD K D D +P E C CLKC++ D R++ + E Sbjct: 1 MLIQSSLLSSVEAGLCYVYDDGK-DFQRDRMPSGETCQVCLKCNKYPADWCRKAEPMEED 59 Query: 571 KYNAADSSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQ 693 NA D + L + ST S M + APN+VY+R+KL+ Sbjct: 60 NRNADDPFNSNCLRSCGRPSTASIMTENTAPNLVYRRKKLR 100 >ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|222854090|gb|EEE91637.1| predicted protein [Populus trichocarpa] Length = 607 Score = 58.9 bits (141), Expect = 9e-07 Identities = 36/95 (37%), Positives = 49/95 (51%) Frame = +1 Query: 409 ISSSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREAKYNAAD 588 +S+SIE SD KQD+ CDW+P EI C KC E + ++++ I E K + Sbjct: 7 LSTSIECTPFHVSDQGKQDLFCDWMPGTEIWQMCSKCHEHCHNCCKDAASITEEK-ETNN 65 Query: 589 SSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQ 693 S L+ T+ M S AP+ VY RRKLQ Sbjct: 66 YSCLLSFPRGPHPPTIIKMSESSAPSFVYCRRKLQ 100