BLASTX nr result

ID: Cimicifuga21_contig00017606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017606
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800...    61   2e-07
ref|XP_003602916.1| PHD and RING finger domain-containing protei...    59   9e-07
ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|2...    59   9e-07

>ref|XP_003527593.1| PREDICTED: uncharacterized protein LOC100800660 [Glycine max]
          Length = 487

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
 Frame = +1

Query: 397 MLIPIS--SSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREA 570
           MLI  S  SS+EA L + SDD K D+LCD +P  E     LKC++   D  R++  + E 
Sbjct: 1   MLIQTSVLSSVEAGLCYVSDDGK-DVLCDRMPSGETWQVGLKCNKYPLDWCRKAEPVEED 59

Query: 571 KYNAAD---SSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQTD 699
           K NA D   SS LV      + ST S M  +  PN+VY+R+KL  D
Sbjct: 60  KRNADDPYRSSCLVSFG---QPSTASIMTENTTPNMVYRRKKLCKD 102


>ref|XP_003602916.1| PHD and RING finger domain-containing protein [Medicago truncatula]
           gi|355491964|gb|AES73167.1| PHD and RING finger
           domain-containing protein [Medicago truncatula]
          Length = 475

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = +1

Query: 397 MLIPIS--SSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREA 570
           MLI  S  SS+EA L +  DD K D   D +P  E C  CLKC++   D  R++  + E 
Sbjct: 1   MLIQSSLLSSVEAGLCYVYDDGK-DFQRDRMPSGETCQVCLKCNKYPADWCRKAEPMEED 59

Query: 571 KYNAADSSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQ 693
             NA D  +   L    + ST S M  + APN+VY+R+KL+
Sbjct: 60  NRNADDPFNSNCLRSCGRPSTASIMTENTAPNLVYRRKKLR 100


>ref|XP_002308114.1| predicted protein [Populus trichocarpa] gi|222854090|gb|EEE91637.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 36/95 (37%), Positives = 49/95 (51%)
 Frame = +1

Query: 409 ISSSIEAALSFESDDRKQDILCDWIPRDEICPECLKCDEISRDGYRESSLIREAKYNAAD 588
           +S+SIE      SD  KQD+ CDW+P  EI   C KC E   +  ++++ I E K    +
Sbjct: 7   LSTSIECTPFHVSDQGKQDLFCDWMPGTEIWQMCSKCHEHCHNCCKDAASITEEK-ETNN 65

Query: 589 SSSLVHLSPRRKFSTVSNMCASPAPNIVYKRRKLQ 693
            S L+         T+  M  S AP+ VY RRKLQ
Sbjct: 66  YSCLLSFPRGPHPPTIIKMSESSAPSFVYCRRKLQ 100


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