BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017599
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   382   e-103
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   381   e-103
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   378   e-102

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  397 bits (1021), Expect = e-108
 Identities = 200/301 (66%), Positives = 236/301 (78%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1073 LSGAETAETSEVTFDAPSTPSSGSDICLSLQFSMKDLKVSR-QNLSRLRSNGFRYESKKI 897
            LSG  +A       D P  PSS   IC +LQFS ++L+  R Q LSRL+S+ ++      
Sbjct: 534  LSGVASAVQDTPVLDTPM-PSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTT 592

Query: 896  KRCFAAATLELYQPENXXXXXXXXXXXXXXXXRLFNKEDFGKLKVIGQFNLGFIIGRLDQ 717
            +RC++AATLE  QPEN                +LF K+DFG++KVIGQFNLGFIIG+LDQ
Sbjct: 593  ERCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQ 652

Query: 716  DLFIIDQHAADEKYNFERLSQSTILNQQPLLKPLRLELSPEEEIVAAMHMDIIRKNGFTL 537
            DLFI+DQHAADEKYNFE L+QST+LNQQPLL+PLRL+LSPEEE++A++HMDIIRKNGF L
Sbjct: 653  DLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFAL 712

Query: 536  ADDVNAPPGHRFKLRAVPFSKNITFGVEDVKELISTLADSQGECAITSSYKTDTPDSICP 357
             +D++APPG RFKL+AVPFSKNITFGVEDVKELISTLAD QGEC+I  +YK DT DSICP
Sbjct: 713  EEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICP 772

Query: 356  SRVRAMLASRACWSSARIGDSLGKNEMQKILKQLVHLKSPWNCPHGRPTMRHLIDLTTIN 177
            SRVRAMLASRAC SS  IGD LG+ EMQ+IL+ L  LKSPWNCPHGRPTMRHL+DLTTI 
Sbjct: 773  SRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTIY 832

Query: 176  K 174
            K
Sbjct: 833  K 833


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  394 bits (1012), Expect = e-107
 Identities = 205/299 (68%), Positives = 237/299 (79%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1055 AETSEVTFDAPSTPSSGSDICLSLQFSMKDLKVSR-QNLSRLRSNGFRYE-SKKIKRCFA 882
            A++S    DAP  P S   IC +LQFS +DL   R Q LSRL+S  F +  SK+  R +A
Sbjct: 612  AQSSIELLDAP-VPFSAQQICSTLQFSFQDLHSRRMQRLSRLQSGKFTFGGSKRSHRSYA 670

Query: 881  AATLELYQPENXXXXXXXXXXXXXXXXRLFNKEDFGKLKVIGQFNLGFIIGRLDQDLFII 702
            AATLEL QP+N                RLF KEDFG++KVIGQFNLGFIIG+LDQDLFI+
Sbjct: 671  AATLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 730

Query: 701  DQHAADEKYNFERLSQSTILNQQPLLKPLRLELSPEEEIVAAMHMDIIRKNGFTLADDVN 522
            DQHAADEKYNFERL QSTILNQQPLL+PLRLELSPEEE+VA+M++DIIRKNGF L +D +
Sbjct: 731  DQHAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVASMNLDIIRKNGFALEEDPH 790

Query: 521  APPGHRFKLRAVPFSKNITFGVEDVKELISTLADSQGECAITSSYKTDTPDSICPSRVRA 342
            A PGH FKL+AVPFSKNITFGVEDVK+LISTLADSQGEC+I S YK DT DS+CPSRV A
Sbjct: 791  ALPGHHFKLKAVPFSKNITFGVEDVKDLISTLADSQGECSIISRYKMDTADSVCPSRVHA 850

Query: 341  MLASRACWSSARIGDSLGKNEMQKILKQLVHLKSPWNCPHGRPTMRHLIDLTTINKKQD 165
            M ASRAC SS  IGD+LG+NEMQKIL+ LV LKSPWNCPHGRPTMRHLID+++I ++ D
Sbjct: 851  MFASRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYERPD 909


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  382 bits (980), Expect = e-103
 Identities = 194/300 (64%), Positives = 226/300 (75%)
 Frame = -2

Query: 1073 LSGAETAETSEVTFDAPSTPSSGSDICLSLQFSMKDLKVSRQNLSRLRSNGFRYESKKIK 894
            LSG  +A       D P  PSS   IC +LQFS ++L+  R                  +
Sbjct: 635  LSGVASAVQDTPVLDTPM-PSSDLKICSTLQFSFEELRTRRH-----------------Q 676

Query: 893  RCFAAATLELYQPENXXXXXXXXXXXXXXXXRLFNKEDFGKLKVIGQFNLGFIIGRLDQD 714
            RC++AATLE  QPEN                +LF K+DFG++KVIGQFNLGFIIG+LDQD
Sbjct: 677  RCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQD 736

Query: 713  LFIIDQHAADEKYNFERLSQSTILNQQPLLKPLRLELSPEEEIVAAMHMDIIRKNGFTLA 534
            LFI+DQHAADEKYNFE L+QST+LNQQPLL+PLRL+LSPEEE++A++HMDIIRKNGF L 
Sbjct: 737  LFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALE 796

Query: 533  DDVNAPPGHRFKLRAVPFSKNITFGVEDVKELISTLADSQGECAITSSYKTDTPDSICPS 354
            +D++APPG RFKL+AVPFSKNITFGVEDVKELISTLAD QGEC+I  +YK DT DSICPS
Sbjct: 797  EDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICPS 856

Query: 353  RVRAMLASRACWSSARIGDSLGKNEMQKILKQLVHLKSPWNCPHGRPTMRHLIDLTTINK 174
            RVRAMLASRAC SS  IGD LG+ EMQ+IL+ L  LKSPWNCPHGRPTMRHL+DLTTI K
Sbjct: 857  RVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTIYK 916


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  381 bits (978), Expect = e-103
 Identities = 199/323 (61%), Positives = 234/323 (72%), Gaps = 23/323 (7%)
 Frame = -2

Query: 1073 LSGAETAETSEVTFDAPSTPSSGSDICLSLQFSMKDLKVSR-QNLSRLRSNGFRYESKKI 897
            LS   +A       D P  PSS   IC +LQFS ++L+  R Q LSRL+S+ ++      
Sbjct: 3334 LSXVASAVQDTPVLDTPM-PSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTT 3392

Query: 896  KRCFAAATLELYQPENXXXXXXXXXXXXXXXXRLFNKEDFGKLKVIGQFNLGFIIGRLDQ 717
            +RC++AATLE  QPEN                +LF K+DFG++KVIGQFNLGFIIG+LDQ
Sbjct: 3393 ERCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQ 3452

Query: 716  DLFIIDQHAADEKYNFERLSQSTILNQQPLLK----------------------PLRLEL 603
            DLFI+DQHAADEKYNFE L+QST+LNQQPLL+                      PLRL+L
Sbjct: 3453 DLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRYGVQNIHEVTSIELLCVSYTIGPLRLDL 3512

Query: 602  SPEEEIVAAMHMDIIRKNGFTLADDVNAPPGHRFKLRAVPFSKNITFGVEDVKELISTLA 423
            SPEEE++A +HMDIIRKNGF L +D++APPG RFKL+AVPFSKNITFGVEDVKELISTLA
Sbjct: 3513 SPEEEVIAFIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLA 3572

Query: 422  DSQGECAITSSYKTDTPDSICPSRVRAMLASRACWSSARIGDSLGKNEMQKILKQLVHLK 243
            D QGEC+I  +YK DT DSICPSRVRAMLASRAC SS  IGD LG+ EMQ+IL+ L  LK
Sbjct: 3573 DGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLK 3632

Query: 242  SPWNCPHGRPTMRHLIDLTTINK 174
            SPWNCPHGRPTMRHL+DLTTI K
Sbjct: 3633 SPWNCPHGRPTMRHLVDLTTIYK 3655


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  378 bits (970), Expect = e-102
 Identities = 193/301 (64%), Positives = 231/301 (76%), Gaps = 3/301 (0%)
 Frame = -2

Query: 1064 AETAETSEVTFDAPSTPSSGSDICLSLQFSMKDLKVSRQNL-SRLRSNGFRYESKKIK-- 894
            A   ++S    D P    S  +IC +LQF+ ++LK  RQ   S L+ +G+     K+K  
Sbjct: 618  APPLQSSSALLDVPKP--SAHEICSTLQFNFQELKAKRQQRRSILQFSGYASGGMKMKSH 675

Query: 893  RCFAAATLELYQPENXXXXXXXXXXXXXXXXRLFNKEDFGKLKVIGQFNLGFIIGRLDQD 714
            R +AAATLEL QP+N                R+F K+DFG++KVIGQFNLGFIIG+LDQD
Sbjct: 676  RTYAAATLELSQPDNEERKARALAAATTELERIFRKQDFGRMKVIGQFNLGFIIGKLDQD 735

Query: 713  LFIIDQHAADEKYNFERLSQSTILNQQPLLKPLRLELSPEEEIVAAMHMDIIRKNGFTLA 534
            LFI+DQHAADEKYNFE L QSTILNQQPLL+ LRLELSPEEE+VA+M+M++IRKNGF L 
Sbjct: 736  LFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLELSPEEEVVASMNMELIRKNGFALE 795

Query: 533  DDVNAPPGHRFKLRAVPFSKNITFGVEDVKELISTLADSQGECAITSSYKTDTPDSICPS 354
            +D +APPGHRFKL+AVPFSKNITFGVEDVK+LISTLADSQG+C+I  SYK D  DS+CPS
Sbjct: 796  EDPHAPPGHRFKLKAVPFSKNITFGVEDVKDLISTLADSQGDCSIIGSYKMDKSDSVCPS 855

Query: 353  RVRAMLASRACWSSARIGDSLGKNEMQKILKQLVHLKSPWNCPHGRPTMRHLIDLTTINK 174
            RVR MLASRAC SS  IGD LG+NEMQKIL+ L  L SPWNCPHGRPTMRHL+D+T+I K
Sbjct: 856  RVRTMLASRACRSSVMIGDPLGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDMTSIYK 915

Query: 173  K 171
            +
Sbjct: 916  R 916