BLASTX nr result

ID: Cimicifuga21_contig00017590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017590
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266...    77   7e-12
emb|CBI37358.3| unnamed protein product [Vitis vinifera]               77   7e-12
ref|XP_003538743.1| PREDICTED: uncharacterized protein LOC100814...    72   2e-10
ref|XP_003516661.1| PREDICTED: uncharacterized protein LOC100792...    72   3e-10
ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09

>ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266068 [Vitis vinifera]
          Length = 2292

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
 Frame = +3

Query: 639  SGEDSVTPTSASKGNVESHVLEPRSCNEDAGRPNCGAPAVLICSEHSSVQIANLSGFGTS 818
            SG  S  P+ A++  V+S  ++     E +   +CG           +   +NL    TS
Sbjct: 1070 SGNLSPIPSGATQ-YVQSKEMQHTGNMERSSTKSCGT---------LTTPTSNLPDLNTS 1119

Query: 819  ASPSAPFQHPVTPPQQAQLRGQIVVVASLNSRKVPDENSMVAAFGESDGGRDLWEK---L 989
            ASPSA FQ P T  QQ QLR QI V  SL     PDE  M +AFG  DGGR LWE     
Sbjct: 1120 ASPSAIFQQPFTDLQQVQLRAQIFVYGSLIQGTAPDEACMASAFGTPDGGRSLWENAWHA 1179

Query: 990  AIKR--NQKSPASTPQTG-HPRSGHFISSGEDFIFQTSASNANMESHVLKSRSYNADAGR 1160
            +++R   QKS  S P+T    RSG             +   A+++   L+ +   +  GR
Sbjct: 1180 SVERLQGQKSHPSNPETPLQSRSG-----------ARTPDQASIQQGALQGKVIPSPVGR 1228

Query: 1161 VNC-GAPAVLI 1190
             +  G P+ ++
Sbjct: 1229 ASSKGTPSTIV 1239


>emb|CBI37358.3| unnamed protein product [Vitis vinifera]
          Length = 1979

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
 Frame = +3

Query: 639  SGEDSVTPTSASKGNVESHVLEPRSCNEDAGRPNCGAPAVLICSEHSSVQIANLSGFGTS 818
            SG  S  P+ A++  V+S  ++     E +   +CG           +   +NL    TS
Sbjct: 945  SGNLSPIPSGATQ-YVQSKEMQHTGNMERSSTKSCGT---------LTTPTSNLPDLNTS 994

Query: 819  ASPSAPFQHPVTPPQQAQLRGQIVVVASLNSRKVPDENSMVAAFGESDGGRDLWEK---L 989
            ASPSA FQ P T  QQ QLR QI V  SL     PDE  M +AFG  DGGR LWE     
Sbjct: 995  ASPSAIFQQPFTDLQQVQLRAQIFVYGSLIQGTAPDEACMASAFGTPDGGRSLWENAWHA 1054

Query: 990  AIKR--NQKSPASTPQTG-HPRSGHFISSGEDFIFQTSASNANMESHVLKSRSYNADAGR 1160
            +++R   QKS  S P+T    RSG             +   A+++   L+ +   +  GR
Sbjct: 1055 SVERLQGQKSHPSNPETPLQSRSG-----------ARTPDQASIQQGALQGKVIPSPVGR 1103

Query: 1161 VNC-GAPAVLI 1190
             +  G P+ ++
Sbjct: 1104 ASSKGTPSTIV 1114


>ref|XP_003538743.1| PREDICTED: uncharacterized protein LOC100814320 [Glycine max]
          Length = 2009

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 53/148 (35%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
 Frame = +3

Query: 792  ANLSGFGTSASPSAPFQHPVTPPQQAQLRGQIVVVASLNSRKVPDENSMVAAFGESDGGR 971
            ++L    TSASP   F  P T  QQ QLR QI V  +L    VPDE  M++AFG SDGGR
Sbjct: 1036 SSLPDLNTSASPPILFHQPFTDQQQVQLRAQIFVYGALIQGTVPDEAYMISAFGGSDGGR 1095

Query: 972  DLWEK-----LAIKRNQKSPASTPQTGHPRSGHFISSGEDFIFQTSASNANMESHVLKSR 1136
             LWE      +  +  QKS  + P+T  P     ++   D   + SA+     S  L   
Sbjct: 1096 SLWENAWRTCMERQHGQKSHPANPET--PLQSRSVARTSDLPHKQSAAQGKGISSPLGRT 1153

Query: 1137 SYNADAGRVNCGAPAVLIYSESSSIPTV 1220
            S  A    VN   P + + S   S+ T+
Sbjct: 1154 SSKATPPIVN---PLIPLSSPLWSLSTL 1178


>ref|XP_003516661.1| PREDICTED: uncharacterized protein LOC100792961 [Glycine max]
          Length = 1223

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
 Frame = +3

Query: 795  NLSGFGTSASPSAPFQHPVTPPQQAQLRGQIVVVASLNSRKVPDENSMVAAFGESDGGRD 974
            ++    TSASP   F  P T  QQ QLR QI V  +L    VPDE  M++AFG SDGGR 
Sbjct: 126  SIPDLNTSASPPVLFHQPFTDQQQVQLRAQIFVYGALIQGMVPDEAYMISAFGGSDGGRS 185

Query: 975  LWEK-----LAIKRNQKSPASTPQTGHPRSGHFISSGEDFIFQTSASNANMESHVLKSRS 1139
            LW+      +  +  QKS  + P+T  P     ++   D   + SA+ A   S  L   S
Sbjct: 186  LWDNAWRACMERQHGQKSHPANPET--PLQSRSVARTSDLPHKQSAAQAKGISSPLGRTS 243

Query: 1140 YNADAGRVNCGAPAVLIYSESSSIPTV 1220
              A    VN   P + + S   S+ T+
Sbjct: 244  SKATPPIVN---PLIPLSSPLWSLSTL 267


>ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|222841713|gb|EEE79260.1|
            predicted protein [Populus trichocarpa]
          Length = 2105

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
 Frame = +3

Query: 792  ANLSGFGTSASPSAPFQHPVTPPQQAQLRGQIVVVASLNSRKVPDENSMVAAFGESDGGR 971
            +NL    +S SPS  FQ P T  QQ QLR QI V  +L     PDE  M++AFG SDGG+
Sbjct: 948  SNLPDLNSSVSPSLMFQQPFTDLQQVQLRAQIFVYGALIQGTAPDEAYMISAFGGSDGGK 1007

Query: 972  DLW--------EKLAIKRNQKSPASTPQTGHPRSGHFISSGEDFIFQTSASNANMESHVL 1127
             +W        E+L  ++   +   TP    P   +  +   D     +   +N++S V+
Sbjct: 1008 SIWENALRSSIERLHGQKPHLTTLETPLLSRPEMRYVGARAPD----QAIKQSNVQSKVI 1063

Query: 1128 KSRSYNADAGRVNCGAPAVL 1187
             S       GR + G P ++
Sbjct: 1064 SS-----PIGRTSMGTPTIV 1078


Top