BLASTX nr result

ID: Cimicifuga21_contig00017564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017564
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2...   243   6e-62
ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago ...   218   2e-54
ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258...   205   2e-50
ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209...   196   7e-48
ref|XP_003574341.1| PREDICTED: uncharacterized protein LOC100824...   190   6e-46

>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  243 bits (620), Expect = 6e-62
 Identities = 132/252 (52%), Positives = 175/252 (69%)
 Frame = -3

Query: 1049 AIPVLQQVTSAARGATDAFSGVGRHVNSSLRKMGAKNIEXXXXXXXXXXXXXXXXXXVKP 870
            A+P++ QV SA RGATDAFSG+ RHVN++L K+GAKNI+                  VKP
Sbjct: 110  ALPMVGQVMSATRGATDAFSGITRHVNTALWKLGAKNIQAGVGCGVGFGHGFGIGLAVKP 169

Query: 869  GVIHQLQSCFGQALAKVMLKFGAVPGLSAGQSILPESFKSRLSMVNESSVQNSIGNTMPL 690
            G + ++Q+CF + L K+M K G  P LS GQ  LP S +S +SM+ ESS+QN +GN   L
Sbjct: 170  GAVQKMQACFLEVLMKMMTKLGIAPNLSIGQGALPMSLQSGVSMLTESSIQNPLGNITQL 229

Query: 689  GLNTSEFTSQVQSRNGSLDRGSTYKSFASEKTPLDTSFGSRTEKVINGFLQSPLLKDEGD 510
                 + TSQ     G++   S+ +S  S+ +  DTSFGSRTEKVI+ FLQ+P+LK++G 
Sbjct: 230  ARKLPDQTSQSLYGYGNVSSHSSSESSTSKGS--DTSFGSRTEKVISSFLQNPILKEDG- 286

Query: 509  TDLNESAGHLRSENNVLQMVMKHQQIIEKLTEENEKLRQILVEELKVPASKLQVGSTSGA 330
            TD+NE AG LRSENN+LQMV++HQQIIE+L EEN+KLRQILVE+LK+P +KLQ   ++  
Sbjct: 287  TDINELAGRLRSENNMLQMVLRHQQIIEELMEENQKLRQILVEDLKIPPNKLQASHSTIN 346

Query: 329  KSHTPCSDCFEC 294
            KS  PC+DCFEC
Sbjct: 347  KS--PCTDCFEC 356


>ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago truncatula]
            gi|355512709|gb|AES94332.1| hypothetical protein
            MTR_5g013280 [Medicago truncatula]
          Length = 292

 Score =  218 bits (556), Expect = 2e-54
 Identities = 123/243 (50%), Positives = 157/243 (64%)
 Frame = -3

Query: 1067 RPLNLGAIPVLQQVTSAARGATDAFSGVGRHVNSSLRKMGAKNIEXXXXXXXXXXXXXXX 888
            RPLNLGAIP+L QV SA RGATDAFSGV RHVN+SLRK+GAKNIE               
Sbjct: 39   RPLNLGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKIGAKNIEVGVGCGVGFGHGFGA 98

Query: 887  XXXVKPGVIHQLQSCFGQALAKVMLKFGAVPGLSAGQSILPESFKSRLSMVNESSVQNSI 708
               VKPGV++Q+QSC    + K+M+KFG  P L     +LP S +S    V+  SV    
Sbjct: 99   GLAVKPGVLNQIQSCLVMTMTKMMIKFGITPSLPFNLGVLPASLQSATGAVSSGSVTQ-- 156

Query: 707  GNTMPLGLNTSEFTSQVQSRNGSLDRGSTYKSFASEKTPLDTSFGSRTEKVINGFLQSPL 528
                 L   +++  SQ  +    ++ G  +   A + T +D+++GSRTEKV+N FLQ+PL
Sbjct: 157  -----LAAKSADQLSQGLAGTQPMNIGLAFDKTAVKDTSVDSTYGSRTEKVLNNFLQNPL 211

Query: 527  LKDEGDTDLNESAGHLRSENNVLQMVMKHQQIIEKLTEENEKLRQILVEELKVPASKLQV 348
            LK EG     ESAG L +EN +LQMV+KHQQ+IE+L EENEKLRQILV+ELKVP SKL+ 
Sbjct: 212  LKGEGGGP-TESAGRLIAENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPPSKLEA 270

Query: 347  GST 339
             S+
Sbjct: 271  SSS 273


>ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258674 [Vitis vinifera]
          Length = 341

 Score =  205 bits (521), Expect = 2e-50
 Identities = 120/294 (40%), Positives = 163/294 (55%), Gaps = 36/294 (12%)
 Frame = -3

Query: 1067 RPLNLGAIPVLQQVTSAARGATDAFSGVGRHVNSSLRKMGAKNIEXXXXXXXXXXXXXXX 888
            RP+N+GAIPV+ QV  A RGATDAFSGVGRHVN +LRK+GAKNIE               
Sbjct: 43   RPINMGAIPVVNQVMGATRGATDAFSGVGRHVNDALRKLGAKNIEAGIGCGVGFGHGFGV 102

Query: 887  XXXVKPGVIHQLQSCFGQALAKVMLKFGAVPGL------------------------SAG 780
               VKPGV+ ++Q C  Q   K+M+KFG +P +                        S G
Sbjct: 103  GLAVKPGVVQKIQYCIVQTTTKMMMKFGILPNIPIGKDIIPPSLSSTVQGIIPPSLSSTG 162

Query: 779  QSILPESFKSRLSMVNESSVQNSIGNTMPLGLNTSEFTSQVQSRNGSLDRGSTYKSFASE 600
            Q IL  S +S +SM NE S QN+ G+ + L     E TS   + + + + GST    ++ 
Sbjct: 163  QGILSPSLQSGMSMTNEPSSQNTTGSVLQLATKLVEQTSYGLAGDATSNTGST-SGASTS 221

Query: 599  KTPLDTSFGSRTEKVINGFLQSPLLKDEGDTDLNESAGHLRSENNVLQMVMKHQQIIEKL 420
            K+   TS  S+T KV+   L   L   EG  ++NE A  LRSENN+L +++ H+QII++L
Sbjct: 222  KSSQGTSLVSQTGKVVTNILHD-LTSTEGGNEVNELAERLRSENNMLHVILNHEQIIQEL 280

Query: 419  TEENEKLRQILVEELKVPASKLQVGSTS------------GAKSHTPCSDCFEC 294
             EENEKLRQ+LVE+L +P  KLQ  ++S              +  +PC DCF+C
Sbjct: 281  KEENEKLRQVLVEDLNIPPCKLQTSNSSRYTSPSEDCSSYSNRQRSPCEDCFDC 334


>ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209798 [Cucumis sativus]
            gi|449526614|ref|XP_004170308.1| PREDICTED:
            uncharacterized LOC101209798 [Cucumis sativus]
          Length = 310

 Score =  196 bits (499), Expect = 7e-48
 Identities = 114/259 (44%), Positives = 158/259 (61%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1067 RPLNLGAIPVLQQVTSAARGATDAFSGVGRHVNSSLRKMGAKNIEXXXXXXXXXXXXXXX 888
            RP+N+GAIP + ++ SA RGATDAFSG+ RH+N+SLRK+GA NI+               
Sbjct: 52   RPMNMGAIPGMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGI 111

Query: 887  XXXVKPGVIHQLQSCFGQALAKVMLKFGAVPGLSAGQSILPESFKSRLSMVNESSVQNSI 708
               +KP  +HQ+QS   QA+ KVM K    P L   Q  +P S +S  S+ N S  ++ I
Sbjct: 112  GLAIKPSFLHQVQSSAMQAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPI 171

Query: 707  GNTMPLGLNTSEFTSQVQSRNGSLD-RGSTYKSFASEKTPLDTSFGSRTEKVINGFLQSP 531
             +   +        +  +  +  LD +GST ++  S +     S+G+RTEKVI+ FLQ+P
Sbjct: 172  ASIRKIAKEVPG--TAPEDLSAYLDTKGSTLQNALSSR-----SYGTRTEKVIDSFLQNP 224

Query: 530  LLKDEGDTDLNESAGHLRSENNVLQMVMKHQQIIEKLTEENEKLRQILVEELKVPASKLQ 351
            + K E DT+L +  G LR EN++ QMV+ HQ++I++L EEN KLRQILVE+LK+P SKL 
Sbjct: 225  VFKGE-DTELKDEVGRLRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLF 283

Query: 350  VGSTSGAKSHTPCSDCFEC 294
              S  G K   PCSDCFEC
Sbjct: 284  QASNIGRKI-PPCSDCFEC 301


>ref|XP_003574341.1| PREDICTED: uncharacterized protein LOC100824000 [Brachypodium
            distachyon]
          Length = 304

 Score =  190 bits (482), Expect = 6e-46
 Identities = 108/262 (41%), Positives = 153/262 (58%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1067 RPLNLGAIPVLQQVTSAARGATDAFSGVGRHVNSSLRKMGAKNIEXXXXXXXXXXXXXXX 888
            RP+ LG IP LQQV SA RGATD+FSGV RH+NS+LRK+G KNIE               
Sbjct: 44   RPIYLGMIPGLQQVMSATRGATDSFSGVTRHINSALRKVGLKNIEAGIGCGVGIGHGFGI 103

Query: 887  XXXVKPGVIHQLQSCFGQALAKVMLKFGAVPGLSAGQSILPESFKSRLSMVNESSVQNSI 708
               +KP VIH +QS   + ++K+  K    PG+SA  ++   S  +              
Sbjct: 104  GIALKPRVIHDIQSSVTEVMSKLTSKLKDSPGVSATSNLTAGSLPTN----------GQT 153

Query: 707  GNTMPLGLNTSEFTSQVQSRNGSLDRGS----TYKSFASEKTPLDTSFGSRTEKVINGFL 540
             N MP+ L     T +    + S +  S    T+          +T  GSRTEKVI  FL
Sbjct: 154  PNGMPMDLEVEAKTVESNFHHTSSNEISQVQPTHGLHGQHGMQPETITGSRTEKVIANFL 213

Query: 539  QSPLLKDEGDTDLNESAGHLRSENNVLQMVMKHQQIIEKLTEENEKLRQILVEELKVPAS 360
            QSPL ++   TD+ ++A +L   +NVLQ+++KHQ++I++L +ENEKLRQ+L+EELKV  +
Sbjct: 214  QSPLFQNNTKTDIRDAAVNLHGMDNVLQLILKHQRVIDELRDENEKLRQVLIEELKVSPT 273

Query: 359  KLQVGSTSGAKSHTPCSDCFEC 294
            KLQ+G  +G K++ PCS+CF+C
Sbjct: 274  KLQLGRENGVKAYYPCSECFDC 295


Top