BLASTX nr result

ID: Cimicifuga21_contig00017561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017561
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797...   105   9e-21
ref|XP_003603139.1| Far upstream element-binding protein [Medica...   103   4e-20
ref|XP_003603138.1| Far upstream element-binding protein [Medica...   103   4e-20
ref|XP_003589039.1| Far upstream element-binding protein [Medica...    99   1e-18
gb|AFK48010.1| unknown [Medicago truncatula]                           97   2e-18

>ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
          Length = 554

 Score =  105 bits (262), Expect = 9e-21
 Identities = 85/253 (33%), Positives = 104/253 (41%), Gaps = 19/253 (7%)
 Frame = +3

Query: 3   GYDYVQPGAYSGAPPHCKMPETPYFAYPPHSS---FTRWDQISDPLSQQSTMGSEYNYYN 173
           GY YVQPGAYSG  P   MP+ PY  YPP       T WDQ + P  QQST G  Y YY+
Sbjct: 285 GYGYVQPGAYSGPSPQYNMPQQPYAGYPPQQPDGYSTNWDQSTAPPHQQSTHGGGYYYYS 344

Query: 174 QKPTQHPSVGGSSTPVDHTRYIYNQATVSSCSCCQGSYGRSYYSQPRASDEQGYAQDGYG 353
           Q+P Q  + GG + P D + Y Y+Q   S             Y+Q   S +QGYAQD Y 
Sbjct: 345 QQPQQPQNPGGPAPPADGSAYNYSQPPSSG------------YNQ---SAQQGYAQDSYN 389

Query: 354 CGYXXXXXXXKTGYGQP---QMLGNYGTGAKPAQR------------VPAP-VRPYFATL 485
                     ++GYGQP        YG+ + PAQ               AP  +P   T+
Sbjct: 390 A----YNAQSQSGYGQPPTYDQQQGYGSESNPAQEGHTANYAVQGDSAQAPSAQP--ITV 443

Query: 486 EDXXXXXXXXXXXXXXXXXYLRSSQFGYGTTLASQTCYIQPALVQPGYVPFRSTARSPNS 665
                                 + Q GYG    SQ  Y   +  QPGY         P +
Sbjct: 444 AQQGYPTNQLPSSNTANYPPQGTPQPGYGVPPTSQAAYGNQS--QPGYGGAVQPGYGPQT 501

Query: 666 RLAPAALQAGYVQ 704
             AP   Q GY Q
Sbjct: 502 YGAPQGGQPGYGQ 514


>ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
           gi|355492187|gb|AES73390.1| Far upstream element-binding
           protein [Medicago truncatula]
          Length = 605

 Score =  103 bits (256), Expect = 4e-20
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
 Frame = +3

Query: 3   GYDYVQPGAYSGAPPHCKMPETPYFAYPPHSS---FTRWDQISDPLSQQSTMGSEYNYYN 173
           GY Y QPG+YSG  P    P+ PY  YPP         WDQ + P  QQST  S Y+YYN
Sbjct: 288 GYGYGQPGSYSGPSPQYNTPQPPYTGYPPQQPGGYSANWDQSTAPSHQQSTHASGYDYYN 347

Query: 174 QKPTQHPSVGGSSTPVDHTRYIYNQATVSSCSCCQGSYGRSYYSQPRASDEQGYAQDGYG 353
           Q+P Q  + GG S P D + Y Y+Q   S             YSQP     QGY Q+ YG
Sbjct: 348 QQPQQQQNPGGPSQPADGSAYSYSQPPSSG------------YSQP----GQGYGQESYG 391

Query: 354 CGYXXXXXXXKTGYGQPQMLG---------NYGTGAKPAQ 446
                     ++GYGQPQ            +YG+G+ P Q
Sbjct: 392 A----YNAQQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQ 427


>ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
           gi|355492186|gb|AES73389.1| Far upstream element-binding
           protein [Medicago truncatula]
          Length = 1145

 Score =  103 bits (256), Expect = 4e-20
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
 Frame = +3

Query: 3   GYDYVQPGAYSGAPPHCKMPETPYFAYPPHSS---FTRWDQISDPLSQQSTMGSEYNYYN 173
           GY Y QPG+YSG  P   MP+ PY  YPP         WDQ + P  QQST  S Y+YYN
Sbjct: 288 GYGYGQPGSYSGPSPQYNMPQPPYAGYPPQQPGGYSANWDQSTAPSHQQSTHASGYDYYN 347

Query: 174 QKPTQHPSVGGSSTPVDHTRYIYNQATVSSCSCCQGSYGRSYYSQPRASDEQGYAQDGYG 353
           Q+P Q  + GG   P D + Y Y+Q   S             YSQP     QGY Q+ YG
Sbjct: 348 QQPQQQQNPGGPPQPADGSGYSYSQPPSSG------------YSQP----GQGYGQESYG 391

Query: 354 CGYXXXXXXXKTGYGQPQMLG---------NYGTGAKPAQ 446
                     ++GYGQPQ            +YG+G+ P Q
Sbjct: 392 A----YNAQQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQ 427


>ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
            gi|355478087|gb|AES59290.1| Far upstream element-binding
            protein [Medicago truncatula]
          Length = 605

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 87/257 (33%), Positives = 116/257 (45%), Gaps = 22/257 (8%)
 Frame = +3

Query: 3    GYDYVQPGAYSGAPPHCKMPETPYFAYPPHSS---FTRWDQISDPLSQQSTMGSEYNYYN 173
            GY Y QPGAY G  P   +P+  Y  YPPHS+    T WDQ S   +QQST    Y+YYN
Sbjct: 313  GYGYAQPGAYPGPTPQYNVPQQAYAGYPPHSAGGYSTNWDQ-STATTQQST----YDYYN 367

Query: 174  QKPTQHPSVGGSSTPVDHTRYIYNQATVSSCSCCQGSYGRSYYSQPRASDEQGYAQDGYG 353
            Q+P Q  + GG + P D T Y Y+Q   +             Y+QP     QGY+QDGYG
Sbjct: 368  QQPQQPQNPGGPAPPADGTAYNYSQPPSAG------------YNQP----GQGYSQDGYG 411

Query: 354  C-------GY-XXXXXXXKTGYG---QPQMLGNYGT-GAKPAQRVPAPVRPY---FATLE 488
                    GY        + GYG   + Q   NYG+ G   A +VP PV+P    + + +
Sbjct: 412  AYQQPPQSGYAQPTSYDQQQGYGSAQEGQTTTNYGSQGQGDATQVP-PVQPSQQGYGSSQ 470

Query: 489  DXXXXXXXXXXXXXXXXXY--LRSSQFGYGTTLASQTCYIQPALVQP-GYVPFRSTARSP 659
                              Y    +SQ  YG+   +Q+ Y  P   +P G  P    ++SP
Sbjct: 471  QPSPNAAKYPPQGAAQPSYGVPPTSQTAYGSQPQTQSGYGPPQTQKPSGTPPAYGQSQSP 530

Query: 660  NSRLAPA-ALQAGYVQP 707
            N+       L +GY QP
Sbjct: 531  NAAGGYGHPLPSGYSQP 547


>gb|AFK48010.1| unknown [Medicago truncatula]
          Length = 342

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 86/256 (33%), Positives = 114/256 (44%), Gaps = 21/256 (8%)
 Frame = +3

Query: 3   GYDYVQPGAYSGAPPHCKMPETPYFAYPPHSS---FTRWDQISDPLSQQSTMGSEYNYYN 173
           GY Y QPGAY G  P   +P+  Y  YPPHS+    T WDQ S   +QQST    Y+YYN
Sbjct: 28  GYGYAQPGAYPGPTPQYNVPQQAYAGYPPHSAGGYSTNWDQ-STATTQQST----YDYYN 82

Query: 174 QKPTQHPSVGGSSTPVDHTRYIYNQATVSSCSCCQGSYGRSYYSQPRASDEQGYAQDGYG 353
           Q+P Q  + GG + P D T Y Y+Q   +             Y+QP     QGY+QDGYG
Sbjct: 83  QQPQQPQNPGGPAPPADGTAYNYSQPPSAG------------YNQP----GQGYSQDGYG 126

Query: 354 C-------GY-XXXXXXXKTGYG---QPQMLGNYGT-GAKPAQRVPAPVRPY---FATLE 488
                   GY        + GYG   + Q   NYG+ G   A +VP PV+P    + + +
Sbjct: 127 AYQQPPQSGYAQPTSYDQQQGYGSAQEGQTTTNYGSQGQGDATQVP-PVQPSQQGYGSSQ 185

Query: 489 DXXXXXXXXXXXXXXXXXY--LRSSQFGYGTTLASQTCYIQPALVQP-GYVPFRSTARSP 659
                             Y    +SQ  YG+   +Q+ Y  P   +P G  P    ++SP
Sbjct: 186 QPSPNAAKYPPQGAAQPSYGVPPTSQTAYGSQPQTQSGYGPPQTQKPSGTPPAYGQSQSP 245

Query: 660 NSRLAPAALQAGYVQP 707
           N+         GY QP
Sbjct: 246 NA-------AGGYGQP 254


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