BLASTX nr result

ID: Cimicifuga21_contig00017553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017553
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275625.1| PREDICTED: mitochondrial translocator assemb...   121   2e-25
ref|XP_002528146.1| conserved hypothetical protein [Ricinus comm...   118   2e-24
ref|XP_003638305.1| MMP37-like protein [Medicago truncatula] gi|...   108   1e-21
ref|XP_004134527.1| PREDICTED: mitochondrial translocator assemb...   106   5e-21
ref|NP_190347.2| uncharacterized protein [Arabidopsis thaliana] ...   106   5e-21

>ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Vitis vinifera]
           gi|297738029|emb|CBI27230.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  121 bits (303), Expect = 2e-25
 Identities = 62/94 (65%), Positives = 71/94 (75%)
 Frame = +3

Query: 6   GHSGNIIQDCNLPATRALVSSLPSTVKSLMGRKLGEKRNPSQSGRIRHEVVIGSREEATN 185
           GH   I QDC L   R+LVSSLPS V+S MG KLGEK   S+SGR+  EVV+GSREEA  
Sbjct: 227 GHQAIISQDCGLSVARSLVSSLPSKVRSQMGMKLGEKTKLSESGRVLREVVVGSREEAAE 286

Query: 186 CMRKVLRRKVMFSSTRQAISGLLAAGGVHAARYV 287
           CMR VLRRKVM SS RQA+SGL+A GGV+A RY+
Sbjct: 287 CMRGVLRRKVMVSSARQAVSGLVAVGGVNAIRYL 320


>ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis]
           gi|223532444|gb|EEF34237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/93 (64%), Positives = 70/93 (75%)
 Frame = +3

Query: 9   HSGNIIQDCNLPATRALVSSLPSTVKSLMGRKLGEKRNPSQSGRIRHEVVIGSREEATNC 188
           +  NI QDC L  TR+LV +LP  V+S MG KLGE++  S SGR  HEV+IGSREEA  C
Sbjct: 227 YQSNISQDCGLSVTRSLVRALPPLVRSKMGMKLGEEKLWSDSGRFLHEVIIGSREEAAKC 286

Query: 189 MRKVLRRKVMFSSTRQAISGLLAAGGVHAARYV 287
           M KVLRR VM SS RQAISGLLAAGG++A RY+
Sbjct: 287 MHKVLRRTVMISSARQAISGLLAAGGINATRYL 319


>ref|XP_003638305.1| MMP37-like protein [Medicago truncatula]
           gi|355504240|gb|AES85443.1| MMP37-like protein [Medicago
           truncatula]
          Length = 331

 Score =  108 bits (270), Expect = 1e-21
 Identities = 51/93 (54%), Positives = 70/93 (75%)
 Frame = +3

Query: 9   HSGNIIQDCNLPATRALVSSLPSTVKSLMGRKLGEKRNPSQSGRIRHEVVIGSREEATNC 188
           H   + QDC+L  +R+LVS+LP +++S +  K GE+  PSQ+GR+ H+  I SREEA NC
Sbjct: 227 HQIEVSQDCDLSVSRSLVSALPPSIRSQLSMKQGEEVKPSQTGRVLHDTKISSREEAANC 286

Query: 189 MRKVLRRKVMFSSTRQAISGLLAAGGVHAARYV 287
           ++++LRR+VM SS RQAISGLLA GGV+A  YV
Sbjct: 287 LQRILRRRVMVSSARQAISGLLAVGGVNATMYV 319


>ref|XP_004134527.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Cucumis sativus]
          Length = 334

 Score =  106 bits (265), Expect = 5e-21
 Identities = 56/97 (57%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
 Frame = +3

Query: 3   GGHSGNIIQDCNLPATRALVSSLPSTVKSLMGRKLGEKRNPSQSGRI--RHEVVIGSREE 176
           G    NI QDC L AT  LVSSLP+TV + +G +LGEKR+ S  GR+  R++V+I SR+E
Sbjct: 226 GDDQANISQDCGLSATEYLVSSLPTTVWNTLGLRLGEKRSLSGPGRVTGRNQVLIQSRKE 285

Query: 177 ATNCMRKVLRRKVMFSSTRQAISGLLAAGGVHAARYV 287
             +CM++VLRRKVM SS RQA+SG+LA GGV AA+Y+
Sbjct: 286 VADCMQRVLRRKVMVSSARQAVSGVLAVGGVKAAKYL 322


>ref|NP_190347.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332644788|gb|AEE78309.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 320

 Score =  106 bits (265), Expect = 5e-21
 Identities = 52/89 (58%), Positives = 70/89 (78%)
 Frame = +3

Query: 21  IIQDCNLPATRALVSSLPSTVKSLMGRKLGEKRNPSQSGRIRHEVVIGSREEATNCMRKV 200
           ++QD +L ATR+LVSSLP++V+S MG+ LGEK+  S++GR+  EV I SREEA  CM KV
Sbjct: 220 LVQDSSLSATRSLVSSLPASVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCMEKV 279

Query: 201 LRRKVMFSSTRQAISGLLAAGGVHAARYV 287
           +RR+VM SS RQA+SG LAAG ++A  Y+
Sbjct: 280 MRRRVMVSSGRQAVSGFLAAGAINATMYL 308


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