BLASTX nr result

ID: Cimicifuga21_contig00017551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017551
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]       79   5e-13
gb|AAP43914.1| integrase [Gossypium raimondii]                         76   3e-12
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]    75   7e-12
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]    70   2e-10
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               70   2e-10

>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -3

Query: 292 LEQFEHFCDLYATISNFGDVYGKCKNARGVVAFFLVHDGFLFCGLQLCVPCSSMR*KII- 116
           +E F+H  +LY    +F +V+ KC N      F ++ +G+LF G QLC+P +S+R  ++ 
Sbjct: 44  IEAFKHLPNLYEEDVDFSEVWAKCNNFIKAEDFHIM-EGYLFKGDQLCIPRTSLREALLK 102

Query: 115 EVHSSALSGQFEVAKTLESLRHRFFWPTMRMETQKFIK 2
           E HS  L+G F   KT E + HRFFWP +R +   F+K
Sbjct: 103 EAHSGGLAGHFGQDKTFEIISHRFFWPQLRRDCNNFVK 140


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -3

Query: 283 FEHFCDLYATISNFGDVYGKCKNARGVVAFFLVHDGFLFCGLQLCVPCSSMR*KII-EVH 107
           FE+  DLYAT S+F  +Y  C++  G    F  HDG+LF   +LC+P  SMR  ++ E H
Sbjct: 114 FEYLKDLYATDSDFASIYDACEH--GAFHKFYKHDGYLFQNNRLCLPKCSMRELLVREAH 171

Query: 106 SSALSGQFEVAKTLESLRHRFFWPTMRMETQK 11
           S  L G F V KT + L   F+WP MR   +K
Sbjct: 172 SGGLMGHFGVTKTYDVLHEHFYWPNMRKLVEK 203


>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
          Length = 1124

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -3

Query: 289  EQFEHFCDLYATISNFGDVYGKCKNARGVVAFFLVHDGFLFCGLQLCVPCSSMR*KII-E 113
            E+FE+  +LYA   +F  VYG C+ A      F   DG+LF   +LCVP SSMR  ++ E
Sbjct: 729  ERFEYVKELYANDDDFASVYGACEKA--AFGKFYRLDGYLFRENRLCVPNSSMREFLVRE 786

Query: 112  VHSSALSGQFEVAKTLESLRHRFFWPTMRMETQK 11
             H   L G F V KTL+ L   FFWP M+ + +K
Sbjct: 787  AHGDGLMGHFGVRKTLDVLHEHFFWPKMKRDVEK 820


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = -3

Query: 298  ASLEQFEHFCDLYATISNFGDVYGKCKNARGVVAF--FLVHDGFLFCGLQLCVPCSSMR* 125
            A L  FE+  +LYA   +F  VYG C+     VAF  F   DG+LF   +LCVP SSMR 
Sbjct: 731  AKLLGFEYVKELYANDDDFASVYGACEK----VAFGKFYRLDGYLFRENRLCVPNSSMRE 786

Query: 124  KII-EVHSSALSGQFEVAKTLESLRHRFFWPTMRMETQK 11
             ++ E H   L G F V KTL+ L    FWP M+ + ++
Sbjct: 787  LLVREAHEGGLMGHFGVRKTLDVLHEHIFWPKMKRDVER 825


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = -3

Query: 298  ASLEQFEHFCDLYATISNFGDVYGKCKNARGVVAFFLVHDGFLFCGLQLCVPCSSMR*KI 119
            A L  FEH   LYA  S+F  +Y  C+  +     +  HDGFLF   +LC+P SS+R   
Sbjct: 1330 AKLLGFEHIKSLYANDSDFEKIYSSCE--KFAFGKYYRHDGFLFYDNRLCIPNSSLRELF 1387

Query: 118  I-EVHSSALSGQFEVAKTLESLRHRFFWPTMRMETQK 11
            I E H   L G F V+KT++ ++  F WP M+ + ++
Sbjct: 1388 IREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVER 1424


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