BLASTX nr result

ID: Cimicifuga21_contig00017547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017547
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250...   307   2e-81
ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805...   306   4e-81
ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804...   302   6e-80
ref|XP_002534606.1| structural constituent of ribosome, putative...   301   8e-80

>ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|222857955|gb|EEE95502.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  323 bits (827), Expect = 4e-86
 Identities = 159/187 (85%), Positives = 171/187 (91%)
 Frame = +2

Query: 92  MFKHIFSQVCTKGTFASTGDKTIPSLYILASGFHSGQVHSAPRSFFGVEDFLDDDNSRPY 271
           M K +F +V  KG FA+ GDK  P LY+  +GFH+GQ H APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQVFGKVLNKGFFANGGDKLRPGLYVPNTGFHNGQAHCAPRSFFGVEDFLDDDNSRPY 60

Query: 272 TYKKEKKSKNPQKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 451
           TY+K KKSKNP KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK
Sbjct: 61  TYQKGKKSKNPNKHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 452 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 631
           DIKAVLKSRSDIPACL+VGQILADRAREADVYTA+YTPRERDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 180

Query: 632 DIKVYLD 652
           D+K+YLD
Sbjct: 181 DVKIYLD 187


>ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250278 [Vitis vinifera]
           gi|298204993|emb|CBI34300.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  307 bits (786), Expect = 2e-81
 Identities = 151/187 (80%), Positives = 169/187 (90%)
 Frame = +2

Query: 92  MFKHIFSQVCTKGTFASTGDKTIPSLYILASGFHSGQVHSAPRSFFGVEDFLDDDNSRPY 271
           M KH+  ++  KG +A+  D+  P LY+  SGFH+G+ H APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKHLSGKLWIKGVWANGRDQFRPCLYVPTSGFHNGKAHLAPRSFFGVEDFLDDDNSRPY 60

Query: 272 TYKKEKKSKNPQKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 451
           TY+KEKKSKNP KHISFKQRT AYMEPFTLDV ISKRFVSASLTHRVTSKQVAVAGTNSK
Sbjct: 61  TYQKEKKSKNPNKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 452 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 631
           DIKAVLKSRSDIPACL++G+IL++RAREADVYTA+YTPR+RDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGI 180

Query: 632 DIKVYLD 652
           D+KVYLD
Sbjct: 181 DVKVYLD 187


>ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805468 [Glycine max]
          Length = 202

 Score =  306 bits (783), Expect = 4e-81
 Identities = 146/189 (77%), Positives = 168/189 (88%)
 Frame = +2

Query: 86  QNMFKHIFSQVCTKGTFASTGDKTIPSLYILASGFHSGQVHSAPRSFFGVEDFLDDDNSR 265
           +NM K +  ++C    +A  G++ +P +Y+ +  FH GQ H APRSFFGVEDFLDDDNSR
Sbjct: 14  RNMLKQVIGRICRTDVYACEGNRVLPWIYVPSCFFHHGQAHMAPRSFFGVEDFLDDDNSR 73

Query: 266 PYTYKKEKKSKNPQKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 445
           PYTY+K KKSKNP KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN
Sbjct: 74  PYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 133

Query: 446 SKDIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDN 625
           SKDIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTPR+RDKFEGKIRAVVQSLIDN
Sbjct: 134 SKDIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDN 193

Query: 626 GIDIKVYLD 652
           GIDIKVYLD
Sbjct: 194 GIDIKVYLD 202


>ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804348 [Glycine max]
          Length = 187

 Score =  302 bits (773), Expect = 6e-80
 Identities = 146/187 (78%), Positives = 166/187 (88%)
 Frame = +2

Query: 92  MFKHIFSQVCTKGTFASTGDKTIPSLYILASGFHSGQVHSAPRSFFGVEDFLDDDNSRPY 271
           M K    ++   G +A  G++ +P +Y+ +S FH GQ H APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQAIGRIFRTGVYACEGNRVLPWIYVPSSFFHHGQAHMAPRSFFGVEDFLDDDNSRPY 60

Query: 272 TYKKEKKSKNPQKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 451
           TY+K KKSKNP KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK
Sbjct: 61  TYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 452 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 631
           DIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTPR+RDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGI 180

Query: 632 DIKVYLD 652
           DIKVYLD
Sbjct: 181 DIKVYLD 187


>ref|XP_002534606.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223524931|gb|EEF27777.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 188

 Score =  301 bits (772), Expect = 8e-80
 Identities = 151/188 (80%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
 Frame = +2

Query: 92  MFKHIFSQVCTKGTFASTGDKTIPSLYILASGFHSGQVHSAPRSFFGVEDFLDDDNSRPY 271
           M K +  ++  +G F + GDK   SLY+  S FH+GQVH +PRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQVLGKIIHRGPFLNGGDKLRLSLYVPGSCFHNGQVHYSPRSFFGVEDFLDDDNSRPY 60

Query: 272 TYKKEKKSKNPQ-KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 448
           TY+KEKKSKNP  KH+SFKQRT AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS
Sbjct: 61  TYQKEKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120

Query: 449 KDIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNG 628
           KDIKA L+SRSDIPACL++G+IL++RAREADVYTA+YTPRERDKFEGKIRAVVQSLIDNG
Sbjct: 121 KDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180

Query: 629 IDIKVYLD 652
           IDIKVYLD
Sbjct: 181 IDIKVYLD 188


Top