BLASTX nr result

ID: Cimicifuga21_contig00017540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017540
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   204   1e-50
ref|XP_003607233.1| Transcription factor tau subunit sfc4 [Medic...   182   4e-44
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...   178   6e-43
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   178   8e-43

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  214 bits (546), Expect = 8e-54
 Identities = 107/206 (51%), Positives = 147/206 (71%)
 Frame = -2

Query: 618 GDSGQATYCLDKAIKANPEDTSLRFHRAKIYAELRDYHKAAELYHQVVELHPDNVEACML 439
           G++GQA YCL KAI A+PED SLRFHRA +Y EL +Y KAAE Y Q+ +L P+NVEA   
Sbjct: 175 GNTGQARYCLSKAITADPEDISLRFHRASLYVELGEYQKAAESYEQISQLFPENVEAPKT 234

Query: 438 AAKMYRKCNQVEQSIRILEDYIRNHSKEADFSTIGLLVAIHMENSAYAKAIQQIDLARSI 259
            AK+Y+KC QVE+S+ ILEDYI++H  +AD S + +L A+ MEN+ + +A+Q I+ A+ +
Sbjct: 235 GAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQLL 294

Query: 258 YSSQKQLPIYLTVKAVICQVHLGNIEEAEIFYNFLEKEYAEDISHLIMEVAETCMNCGHN 79
           Y S K LP++LT+KA IC +HLGNIE+AE  ++ L++E   D + LI EVA++ M+    
Sbjct: 295 YCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSVLQRETC-DHAGLISEVADSFMSLELY 353

Query: 78  ELALKYYCKLEENTTHGTEFLHLRIA 1
           + ALKYY  LE N      FLHL+IA
Sbjct: 354 DFALKYYLMLEGNVGRDNGFLHLKIA 379


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Vitis vinifera]
          Length = 1110

 Score =  204 bits (519), Expect = 1e-50
 Identities = 101/193 (52%), Positives = 140/193 (72%)
 Frame = -2

Query: 618 GDSGQATYCLDKAIKANPEDTSLRFHRAKIYAELRDYHKAAELYHQVVELHPDNVEACML 439
           G++GQA YCL KAI A+PED SLRFHRA +Y EL +Y KAAE Y Q+ +L P+NVEA   
Sbjct: 215 GNTGQARYCLSKAITADPEDISLRFHRASLYVELGEYQKAAESYEQISQLFPENVEAPKT 274

Query: 438 AAKMYRKCNQVEQSIRILEDYIRNHSKEADFSTIGLLVAIHMENSAYAKAIQQIDLARSI 259
            AK+Y+KC QVE+S+ ILEDYI++H  +AD S + +L A+ MEN+ + +A+Q I+ A+ +
Sbjct: 275 GAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQLL 334

Query: 258 YSSQKQLPIYLTVKAVICQVHLGNIEEAEIFYNFLEKEYAEDISHLIMEVAETCMNCGHN 79
           Y S K LP++LT+KA IC +HLGNIE+AE  ++ L++E   D + LI EVA++ M+    
Sbjct: 335 YCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSVLQRETC-DHAGLISEVADSFMSLELY 393

Query: 78  ELALKYYCKLEEN 40
           + ALKYY  LE N
Sbjct: 394 DFALKYYLMLEGN 406


>ref|XP_003607233.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
           gi|355508288|gb|AES89430.1| Transcription factor tau
           subunit sfc4 [Medicago truncatula]
          Length = 958

 Score =  182 bits (462), Expect = 4e-44
 Identities = 99/205 (48%), Positives = 138/205 (67%)
 Frame = -2

Query: 615 DSGQATYCLDKAIKANPEDTSLRFHRAKIYAELRDYHKAAELYHQVVELHPDNVEACMLA 436
           D GQA+YC+ KAIKA+P+D+SLR H+A +YAE ++Y KAAE Y QV +L  +NV+A   A
Sbjct: 250 DIGQASYCISKAIKADPQDSSLRSHQAMLYAESQNYQKAAEAYEQVYQLCRENVDALKAA 309

Query: 435 AKMYRKCNQVEQSIRILEDYIRNHSKEADFSTIGLLVAIHMENSAYAKAIQQIDLARSIY 256
           AK Y+KC QVE+SI ILEDY++N     + S + LL AI ME  A+ +A+Q I+ ++ + 
Sbjct: 310 AKYYQKCGQVERSICILEDYLKNKPDGVNASVVDLLGAILMEIKAHDRALQYIEQSQVV- 368

Query: 255 SSQKQLPIYLTVKAVICQVHLGNIEEAEIFYNFLEKEYAEDISHLIMEVAETCMNCGHNE 76
              K+LP+ L VKA IC VHLGN+E A++F+N L+ E A      I EVA++ M  GH  
Sbjct: 369 --GKELPLNLKVKAGICHVHLGNLEMAQVFFNDLKPENASKHVESITEVADSFMGLGHYN 426

Query: 75  LALKYYCKLEENTTHGTEFLHLRIA 1
            AL Y+  LE N+ +    L+L+IA
Sbjct: 427 SALNYFKMLEGNSKNEDGLLYLKIA 451


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
           sativus]
          Length = 927

 Score =  178 bits (452), Expect = 6e-43
 Identities = 94/206 (45%), Positives = 135/206 (65%)
 Frame = -2

Query: 618 GDSGQATYCLDKAIKANPEDTSLRFHRAKIYAELRDYHKAAELYHQVVELHPDNVEACML 439
           GD  QA+YCL KAIKA P+D +L FHRA +Y E  D  KAAE Y Q+ +    NVEA M 
Sbjct: 239 GDIDQASYCLSKAIKAEPDDINLLFHRASLYLERGDCEKAAETYDQIHQQCLGNVEALMT 298

Query: 438 AAKMYRKCNQVEQSIRILEDYIRNHSKEADFSTIGLLVAIHMENSAYAKAIQQIDLARSI 259
            AK+Y+KC  +E++I ILEDYI+ H  EAD   + LL +++M +  ++KA+++I+ A  +
Sbjct: 299 GAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALERIEHADRV 358

Query: 258 YSSQKQLPIYLTVKAVICQVHLGNIEEAEIFYNFLEKEYAEDISHLIMEVAETCMNCGHN 79
           Y +  +LP+ LT KA IC  HLG++E+AE  +  L +E   D S+L++EVA++ M+  H 
Sbjct: 359 YCAGNELPLNLTTKAGICHAHLGDLEKAECLFANLRRETTYDHSNLMIEVADSLMSLKHY 418

Query: 78  ELALKYYCKLEENTTHGTEFLHLRIA 1
             ALKYY   EE   +G   L+L+IA
Sbjct: 419 SWALKYYLMSEE--VNG--ILYLKIA 440


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
           gi|355508598|gb|AES89740.1| Transcription factor tau
           subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  178 bits (451), Expect = 8e-43
 Identities = 99/206 (48%), Positives = 140/206 (67%)
 Frame = -2

Query: 618 GDSGQATYCLDKAIKANPEDTSLRFHRAKIYAELRDYHKAAELYHQVVELHPDNVEACML 439
           GD+GQA+YC+ KAIKA+P+D SLR H+A +YAE ++Y KAAE Y Q+ +L  ++ +A   
Sbjct: 250 GDAGQASYCISKAIKADPQDISLRRHQALLYAESQNYQKAAEAYEQIHQLCRED-DALKE 308

Query: 438 AAKMYRKCNQVEQSIRILEDYIRNHSKEADFSTIGLLVAIHMENSAYAKAIQQIDLARSI 259
           AAK YRKC QVE+SI ILEDY+++     + S + LL AI ME  A+ +A+Q I+ ++ +
Sbjct: 309 AAKFYRKCGQVERSICILEDYLKSKPDGVNASVVDLLGAILMEIKAHDRALQFIEQSQVV 368

Query: 258 YSSQKQLPIYLTVKAVICQVHLGNIEEAEIFYNFLEKEYAEDISHLIMEVAETCMNCGHN 79
               K+LP+ L VKA IC VHLGN+E A++F+N L+ E A     LI EVA++ M  GH 
Sbjct: 369 ---GKELPLNLKVKAGICHVHLGNMEIAQVFFNDLKPENASKHVELITEVADSLMGLGHY 425

Query: 78  ELALKYYCKLEENTTHGTEFLHLRIA 1
             AL Y+  LE N+ +   FL+L+IA
Sbjct: 426 NSALNYFKMLEGNSKNENGFLYLKIA 451


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