BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017539
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   138   4e-31
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   137   7e-31
gb|ACU17923.1| unknown [Glycine max]                                  135   3e-30
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   135   3e-30
gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersi...   135   3e-30

>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
          Length = 1204

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
 Frame = -2

Query: 293  KIVTMPPHLKPKVYPDFMGKEDFLSYKSDKLLGQLYRKITDS------SPKLYSAPGDIP 132
            K+VTMPPHLKPK+YPDFMGKE   SY+S K+LG+LYR+I D+      +P L    GDIP
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGDIP 1020

Query: 131  YDTDLELPGSAEFIPDAWNKKCSYDGQLNALMGQYNVNGEAEV 3
            YD DLE+PGSA+FI DAW +KCSYDGQL+ L+GQY V  E EV
Sbjct: 1021 YDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEV 1063


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
          Length = 1204

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
 Frame = -2

Query: 293  KIVTMPPHLKPKVYPDFMGKEDFLSYKSDKLLGQLYRKITDS------SPKLYSAPGDIP 132
            K+VTMPPHLKPK+YPDFMGKE   SY+S+K+LG+LYR I D+      +P L    GDIP
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKERHQSYRSNKILGRLYRHIKDAYDEDIEAPYLNFVTGDIP 1020

Query: 131  YDTDLELPGSAEFIPDAWNKKCSYDGQLNALMGQYNVNGEAEV 3
            YD DLE+PGSA+FI DAW +KCSYDGQL+ L+GQY V  E EV
Sbjct: 1021 YDKDLEVPGSADFIADAWEQKCSYDGQLSGLIGQYKVKREEEV 1063


>gb|ACU17923.1| unknown [Glycine max]
          Length = 290

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 6/103 (5%)
 Frame = -2

Query: 293 KIVTMPPHLKPKVYPDFMGKEDFLSYKSDKLLGQLYRKITDS------SPKLYSAPGDIP 132
           K+VTMPPHLKPK+YPDFMGKE   SY+S K+LG+LYR+I D+      +P L    G IP
Sbjct: 47  KLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGGIP 106

Query: 131 YDTDLELPGSAEFIPDAWNKKCSYDGQLNALMGQYNVNGEAEV 3
           YD DLE+PGSA+FI DAW +KCSYDGQL+ L+GQY V  E EV
Sbjct: 107 YDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEV 149


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/104 (59%), Positives = 83/104 (79%), Gaps = 7/104 (6%)
 Frame = -2

Query: 293  KIVTMPPHLKPKVYPDFMGKEDFLSYKSDKLLGQLYRKITDS-------SPKLYSAPGDI 135
            K+V+MPP+LKPK+YPDFMGKE++ SYKS+K+LG+LYR+I D+       S +L   PGDI
Sbjct: 965  KVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDI 1024

Query: 134  PYDTDLELPGSAEFIPDAWNKKCSYDGQLNALMGQYNVNGEAEV 3
            PYD+DLE+ G++++I DAW++KCSYDGQLN L+ QY V  E EV
Sbjct: 1025 PYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEV 1068


>gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
          Length = 1197

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/104 (63%), Positives = 77/104 (74%), Gaps = 7/104 (6%)
 Frame = -2

Query: 293  KIVTMPPHLKPKVYPDFMGKEDFLSYKSDKLLGQLYRKITD-------SSPKLYSAPGDI 135
            K+VTMP  LKPK+YPDFMGKE F SY+S K+LG+LYR++ D        S  L   P DI
Sbjct: 962  KLVTMPFDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKDI 1021

Query: 134  PYDTDLELPGSAEFIPDAWNKKCSYDGQLNALMGQYNVNGEAEV 3
            PYDT+LE+PG  +FI DAWN KCSYDGQLN L+GQY VNGE EV
Sbjct: 1022 PYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEV 1065