BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017517
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    75   4e-25
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    80   9e-25
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   2e-24
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    71   3e-22
ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-...    78   2e-21

>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 75.5 bits (184), Expect(2) = 4e-25
 Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
 Frame = +1

Query: 1   EKRVCNSQVPVPHNRFCSGSSHGWLVTVSPKF--EVRLLNPFLSSDNEIKLPPLTAFE-- 168
           +K+    Q+P   +++C  S +GWL+T++  F  E+  LNP   S  +I LPP   FE  
Sbjct: 77  KKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPI--SGVQIDLPPAITFEDS 134

Query: 169 ---YGQTPSNVGYLKKAVLSANPT-LEPNYVVMVIYNECSRLAYCKPGDKGWTSLK 324
                +TP    +L K VLS+ P+    N V+M I++  ++LA+CKPGDK W +LK
Sbjct: 135 PPDLDETPIEF-FLNKVVLSSTPSPSNANCVIMAIHSNYNKLAFCKPGDKRWITLK 189



 Score = 65.5 bits (158), Expect(2) = 4e-25
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
 Frame = +3

Query: 321 KIWFGWWSSDCRLK----YRDQFYVVNYVGEVFACDFNHPDVKILRISARPEEKCSTRRY 488
           K W    S D + K    Y+D FY +    +V  CD    D +++  +  P+      RY
Sbjct: 183 KRWITLKSEDIQYKDLLYYKDNFYAIGR-SKVVQCDIGD-DPRVIPFALLPKMGYFQYRY 240

Query: 489 LVESSGELLQILRFTKFAELENNENV-----------------------YNYFTGGFKVF 599
           LVESSG LL +LR+    +L++NE+                        Y Y T  FKV+
Sbjct: 241 LVESSGCLLYVLRYM---DLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFKVY 297

Query: 600 KLDPVELKWIELDNLNGHTLFLGNNCSMCLRASDFPECKSNSIYFTD 740
             D  + KW  + N+    L LG+N ++ +    F   KSN IYF D
Sbjct: 298 NFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLD 344


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 79.7 bits (195), Expect(2) = 9e-25
 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
 Frame = +3

Query: 363 YRDQFYVVNYVGEVFACDFN--HPDVKILRISARPEEKCSTRRYLVESSGELLQILRFTK 536
           +R  FY VN  G +  CD +   P V I+ +   P++     +YLVES  ELL + R+  
Sbjct: 215 HRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM---PQQFGGDLQYLVESGEELLLVTRYLD 271

Query: 537 FA-ELENNENVYNYFTGGFKVFKLDPVELKWIELDNLNGHTLFLGNNCSMCLRASDFPEC 713
              ++E ++    Y T  F+V +LD    +W  + +L    LFLG N S+ L + DFP C
Sbjct: 272 LTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 714 KSNSIYFTD 740
           K N IY+TD
Sbjct: 332 KGNCIYYTD 340



 Score = 60.1 bits (144), Expect(2) = 9e-25
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
 Frame = +1

Query: 37  HNRFCSGSSHGWLVTVSPKFEVRLLNPFLSSDNEIKLPPLTAF-------------EYGQ 177
           H R   GSSHGWL+ +    E+ LLNP   S  ++ LPPL+ F             EY  
Sbjct: 85  HRRRRRGSSHGWLLILDEAPEIFLLNPLTRS--KVHLPPLSTFPNVVRFNFADVGREYAL 142

Query: 178 TPSNV------------GYLKKAVLSANPTLEPNYVVMVIYNECSRLAYCKPGDKGWTSL 321
             S+              ++KK +LS++P    +++ +VI N+   LA C+  D  WT L
Sbjct: 143 RTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFL 202

Query: 322 K 324
           +
Sbjct: 203 E 203


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 78.6 bits (192), Expect(2) = 2e-24
 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
 Frame = +3

Query: 363 YRDQFYVVNYVGEVFACDFN--HPDVKILRISARPEEKCSTRRYLVESSGELLQILRFTK 536
           +R  FY VN  G +  CD +   P V I+ +   P++     +YLVES  ELL + R+  
Sbjct: 215 HRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM---PQQFGGDLQYLVESGEELLLVTRYLD 271

Query: 537 FA-ELENNENVYNYFTGGFKVFKLDPVELKWIELDNLNGHTLFLGNNCSMCLRASDFPEC 713
              ++E ++    Y T  F+V +LD    +W  + +L    LFLG N S+ L + DFP C
Sbjct: 272 LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 714 KSNSIYFTD 740
           K N IY+TD
Sbjct: 332 KGNCIYYTD 340



 Score = 60.1 bits (144), Expect(2) = 2e-24
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
 Frame = +1

Query: 37  HNRFCSGSSHGWLVTVSPKFEVRLLNPFLSSDNEIKLPPLTAF-------------EYGQ 177
           H R   GSSHGWL+ +    E+ LLNP   S  ++ LPPL+ F             EY  
Sbjct: 85  HRRRRRGSSHGWLLILDEAPEIFLLNPLTRS--KVHLPPLSTFPNVVRFNFADVGREYAL 142

Query: 178 TPSNV------------GYLKKAVLSANPTLEPNYVVMVIYNECSRLAYCKPGDKGWTSL 321
             S+              ++KK +LS++P    +++ +VI N+   LA C+  D  WT L
Sbjct: 143 RTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFL 202

Query: 322 K 324
           +
Sbjct: 203 E 203


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 70.9 bits (172), Expect(2) = 3e-22
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
 Frame = +3

Query: 375 FYVVNYVGEVFACDFNHPDVKILRISARPEEKCSTRRYLVESSGELLQILRFTKFAELE- 551
           FY VN  G++  CD +    ++  +   P +     +YLV S  ELL +   T++ +LE 
Sbjct: 222 FYAVNKAGQIVICDISSDSPRVSFMET-PRQAGGDMQYLVNSGDELLLV---TRYLDLEY 277

Query: 552 -----NNENVYNYFTGGFKVFKLDPVELKWIELDNLNGHTLFLGNNCSMCLRASDFPECK 716
                + E    Y T  F+VF+LD    +W+ +  L    LF+G N S+ L A+DF  C 
Sbjct: 278 EFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCM 337

Query: 717 SNSIYFTD 740
            N IY+TD
Sbjct: 338 GNCIYYTD 345



 Score = 60.5 bits (145), Expect(2) = 3e-22
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 25/116 (21%)
 Frame = +1

Query: 43  RFCSGSSHGWLVTVSPKFEVRLLNPFLSSDNEIKLPPLTAFE--YGQTPSNVG------- 195
           R C GSSHGWL+ +     + L+NP   +  ++ LPPL++F        S++G       
Sbjct: 91  RHC-GSSHGWLMILDDTPTILLINPLTRA--KLSLPPLSSFPNVISFNYSDIGREYALRN 147

Query: 196 ----------------YLKKAVLSANPTLEPNYVVMVIYNECSRLAYCKPGDKGWT 315
                           +++K VLS++P  + N+VV+ I N+   LAYC+ GDK W+
Sbjct: 148 LLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWS 203


>ref|XP_003571252.1| PREDICTED: putative F-box protein At2g33200-like [Brachypodium
           distachyon]
          Length = 467

 Score = 78.2 bits (191), Expect(2) = 2e-21
 Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
 Frame = +3

Query: 339 WSSDCRLKYRDQFYVVNYVGEVFACDFNHPDVKILRISARPEEKCSTRRYLVES-SGELL 515
           + SDC ++  D FYV +  G + A D + P V    I    ++  S + Y+ ++ SG+LL
Sbjct: 274 YCSDCIIE-EDLFYVASQDGAIHAFDISGPAVTQRVILDEIKDYISDKIYIAQAPSGDLL 332

Query: 516 QILRFTK-------FAELENNENVYNYFTGGFKVFKLDPVELKWIELDNLNGHTLFLGNN 674
           QI ++T+        +EL+ +   Y   +   KV K+D    K +E ++L  + LFLG+N
Sbjct: 333 QIWKYTEDPDYNDDVSELQIDAEFYARCSTTCKVHKVDLAAKKLVEKNSLGENVLFLGHN 392

Query: 675 CSMCLRASDFPECKSNSIYFTD 740
            S+CLRA ++P  K+N +YFTD
Sbjct: 393 PSLCLRAGEYPRLKANHVYFTD 414



 Score = 50.1 bits (118), Expect(2) = 2e-21
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 33/140 (23%)
 Frame = +1

Query: 1   EKRVCNSQVPVP--HNRFCSGSSHGWLVTVSPKFEVRLLNPFLSSDNEIKLPPLTAFE-- 168
           EKR     +P P   +R+  GS+HGW+V+   + E+ LLNP   + ++I LP +T  E  
Sbjct: 133 EKRSYKLTLPDPPIRSRYVIGSNHGWIVSADNRSELHLLNPI--TGDQIALPSVTTIEQV 190

Query: 169 ------YG----------------QTPS--NVGYLK-----KAVLSANPTLEPNYVVMVI 261
                 YG                + P   ++G L+     KA LS++P+   NY V++I
Sbjct: 191 KPVFDDYGALHKYELSRYTALKVYEAPRVFDLGELREYVYLKAFLSSDPS-TGNYYVVLI 249

Query: 262 YNECSRLAYCKPGDKGWTSL 321
           +    +L++ + GD  WT L
Sbjct: 250 HYPYMQLSFARAGDDKWTWL 269