BLASTX nr result

ID: Cimicifuga21_contig00017508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017508
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    97   5e-18
gb|AFK38641.1| unknown [Medicago truncatula]                           56   8e-06
ref|XP_002534683.1| conserved hypothetical protein [Ricinus comm...    56   8e-06

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +3

Query: 162 LFLSRVSFRRKGLRIPNPVG-LDGFVCPSLANRIPAQQHCLCAPYRSRSVFATAGKPVVE 338
           LF+S VSFRRKGLRIPNPVG       P+    I + ++ + APYRSRSVFATAG+ VVE
Sbjct: 196 LFISPVSFRRKGLRIPNPVGGRTALFAPAWL--IASPRNDILAPYRSRSVFATAGEAVVE 253

Query: 339 AKPIATPTIKYEIGPLLSQRFDGMAQP 419
           AKPIATPTIKYEIGPLL    +  + P
Sbjct: 254 AKPIATPTIKYEIGPLLKDLMEWPSPP 280



 Score = 52.4 bits (124), Expect(2) = 6e-10
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +3

Query: 708 KSPGWLVSLVIGDYLAWFGEHLL 776
           +SPGWLVSLVIGDYLAWFGEHLL
Sbjct: 292 QSPGWLVSLVIGDYLAWFGEHLL 314



 Score = 37.7 bits (86), Expect(2) = 6e-10
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 614 WPTPPKSAYVIWELM 658
           WP+PPKSAYVIWELM
Sbjct: 276 WPSPPKSAYVIWELM 290


>gb|AFK38641.1| unknown [Medicago truncatula]
          Length = 57

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = -1

Query: 205 MRRPFLRKETRERKSYAIDRPFRSDFESNQ*ASPFF*FLMGRAK*RMKCRNRGSLPI 35
           MRRPFLRKET E KSYAIDRPFRSDFES   +     F  GR +  M+   + S P+
Sbjct: 1   MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFSILFEAGRIENEMQKYGKSSKPV 57


>ref|XP_002534683.1| conserved hypothetical protein [Ricinus communis]
           gi|223524767|gb|EEF27697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 52

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -2

Query: 201 EGLSFERRPGKERAMLLTDPFVVTSNQ 121
           EGLSFE+RPGKERAMLLTDPFVVTSNQ
Sbjct: 26  EGLSFEKRPGKERAMLLTDPFVVTSNQ 52


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