BLASTX nr result

ID: Cimicifuga21_contig00017482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017482
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29620.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   223   2e-56
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   211   7e-53
ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
ref|XP_003547325.1| PREDICTED: uncharacterized mitochondrial pro...   197   1e-48

>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  223 bits (569), Expect = 2e-56
 Identities = 107/150 (71%), Positives = 125/150 (83%)
 Frame = -1

Query: 633  LSRPLKEKKGQSPEYHNLLRMGLVDSIDGLQYTRMSLVPETDYTPFPSGWRPEHEKVLLE 454
            LSRPLKEKKGQSPEYHNLLRMGLV+SIDGL YTRMSLVPETDY+PFPS WRP+HEK LLE
Sbjct: 581  LSRPLKEKKGQSPEYHNLLRMGLVESIDGLHYTRMSLVPETDYSPFPSNWRPDHEKALLE 640

Query: 453  YIRLEDPKTLEDQRSCLLELGLVTPQDYISMLVWNYKRNAIMVDHLPMLNADNNNVQQAK 274
            YI+L+D KTLE+QRSCL E GLV+PQDYISMLVWNYKRNAI+VD L +  +  ++ Q+ K
Sbjct: 641  YIKLDDSKTLEEQRSCLREHGLVSPQDYISMLVWNYKRNAIIVDQLSVGKSGVSDAQRGK 700

Query: 273  QAPWGLSQAAFDSKKRDEEDSGEGFHAAQM 184
            +   G +   +D + RDEED  EGFHAAQ+
Sbjct: 701  ELLLGSTHENYDHRSRDEEDKEEGFHAAQI 730


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
            vinifera]
          Length = 749

 Score =  223 bits (569), Expect = 2e-56
 Identities = 107/150 (71%), Positives = 125/150 (83%)
 Frame = -1

Query: 633  LSRPLKEKKGQSPEYHNLLRMGLVDSIDGLQYTRMSLVPETDYTPFPSGWRPEHEKVLLE 454
            LSRPLKEKKGQSPEYHNLLRMGLV+SIDGL YTRMSLVPETDY+PFPS WRP+HEK LLE
Sbjct: 600  LSRPLKEKKGQSPEYHNLLRMGLVESIDGLHYTRMSLVPETDYSPFPSNWRPDHEKALLE 659

Query: 453  YIRLEDPKTLEDQRSCLLELGLVTPQDYISMLVWNYKRNAIMVDHLPMLNADNNNVQQAK 274
            YI+L+D KTLE+QRSCL E GLV+PQDYISMLVWNYKRNAI+VD L +  +  ++ Q+ K
Sbjct: 660  YIKLDDSKTLEEQRSCLREHGLVSPQDYISMLVWNYKRNAIIVDQLSVGKSGVSDAQRGK 719

Query: 273  QAPWGLSQAAFDSKKRDEEDSGEGFHAAQM 184
            +   G +   +D + RDEED  EGFHAAQ+
Sbjct: 720  ELLLGSTHENYDHRSRDEEDKEEGFHAAQI 749


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
            gi|223531788|gb|EEF33607.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 732

 Score =  211 bits (538), Expect = 7e-53
 Identities = 99/150 (66%), Positives = 119/150 (79%)
 Frame = -1

Query: 633  LSRPLKEKKGQSPEYHNLLRMGLVDSIDGLQYTRMSLVPETDYTPFPSGWRPEHEKVLLE 454
            LSRPLK+KKG SPEYHNLLRMGLV+SIDGLQYTRMSLVPETDYTPFPS WRP HEK L E
Sbjct: 583  LSRPLKDKKGSSPEYHNLLRMGLVESIDGLQYTRMSLVPETDYTPFPSNWRPNHEKALFE 642

Query: 453  YIRLEDPKTLEDQRSCLLELGLVTPQDYISMLVWNYKRNAIMVDHLPMLNADNNNVQQAK 274
            YI+L+DPKTLE+QR C+ E GL +PQDYISMLVWNYKRNAI +D + ++ + +NN ++ +
Sbjct: 643  YIKLDDPKTLEEQRYCIREQGLFSPQDYISMLVWNYKRNAIAIDQITLVQSGDNNKERDR 702

Query: 273  QAPWGLSQAAFDSKKRDEEDSGEGFHAAQM 184
            Q   G +      K  ++E+  EGFH AQM
Sbjct: 703  QLLLGTNHENNIQKSIEDEEHREGFHVAQM 732


>ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|222870297|gb|EEF07428.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  206 bits (523), Expect = 4e-51
 Identities = 96/150 (64%), Positives = 118/150 (78%)
 Frame = -1

Query: 633 LSRPLKEKKGQSPEYHNLLRMGLVDSIDGLQYTRMSLVPETDYTPFPSGWRPEHEKVLLE 454
           LSRPLKEKKG SP+YHNLLRMGL +SIDGLQYTRMSLVPETDYTPFPS W P+HEK LLE
Sbjct: 526 LSRPLKEKKGSSPDYHNLLRMGLAESIDGLQYTRMSLVPETDYTPFPSNWIPDHEKALLE 585

Query: 453 YIRLEDPKTLEDQRSCLLELGLVTPQDYISMLVWNYKRNAIMVDHLPMLNADNNNVQQAK 274
           YI L+DPKTLEDQR  + + GLV+ QDYISMLVWNYKRNAI +D L ++ +  NN ++ +
Sbjct: 586 YISLDDPKTLEDQRCSIRKQGLVSSQDYISMLVWNYKRNAIAMDQLSLIKSGGNNTEKEQ 645

Query: 273 QAPWGLSQAAFDSKKRDEEDSGEGFHAAQM 184
           Q   G  +  +D K ++EE+  +GF  A++
Sbjct: 646 QLLLGSDKDTYDQKSKEEEEHEDGFDVAEI 675


>ref|XP_003547325.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Glycine
            max]
          Length = 711

 Score =  197 bits (502), Expect = 1e-48
 Identities = 98/150 (65%), Positives = 118/150 (78%)
 Frame = -1

Query: 633  LSRPLKEKKGQSPEYHNLLRMGLVDSIDGLQYTRMSLVPETDYTPFPSGWRPEHEKVLLE 454
            LSRPLKEKKGQSPEY NLLRMGL +SIDGLQYTRMSLVPETDY+PFPS WRP+HEK+LLE
Sbjct: 563  LSRPLKEKKGQSPEYQNLLRMGLAESIDGLQYTRMSLVPETDYSPFPSNWRPDHEKLLLE 622

Query: 453  YIRLEDPKTLEDQRSCLLELGLVTPQDYISMLVWNYKRNAIMVDHLPMLNADNNNVQQAK 274
            YI+LEDPKTLE+QR C+ E GLV+PQDYIS LVWNYKRN++ +D L ++ + N +V   +
Sbjct: 623  YIKLEDPKTLEEQRDCIREQGLVSPQDYISRLVWNYKRNSLPMDQLSLVRS-NESVVGNQ 681

Query: 273  QAPWGLSQAAFDSKKRDEEDSGEGFHAAQM 184
                G +Q   D   ++EE+ G    AAQM
Sbjct: 682  HLLVGSNQDDQDHTNKEEENDGRMNAAAQM 711


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