BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017452
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   364   1e-98
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   357   2e-96
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   352   5e-95
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   332   9e-89
ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   327   2e-87

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  364 bits (935), Expect = 1e-98
 Identities = 184/232 (79%), Positives = 200/232 (86%)
 Frame = +2

Query: 5   MSGAGSPDFFYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQS 184
           MSGAG+PDFFYREAQRLGY ARSAFKLLQMQ +YKLI PG+SVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 185 LGPLKNGGKVVGIDLKKVKVPSAHCDSRVQTVCADVMNFPKDQARALSPKGNGFSVILSD 364
           LGPLKNGG VVGIDLKKVKVPS HCDSRV+TVCADVM  PKD+ RA SP+  GFSVILSD
Sbjct: 61  LGPLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSD 120

Query: 365 MCPLVSGITTKDAALSIELGMRALDLAVGIPCLPHSDDEIHEEKQSDGSSSGADENGILL 544
           MCPLVSGITTKDA LS ELGM+AL LAV  P L  S DEI + +  D S+SG D++GIL 
Sbjct: 121 MCPLVSGITTKDAVLSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQ 180

Query: 545 PGGNLVIKLLESGDVQEFSQICKARFKKAAWLRPKATRSSSREIYLICQGLR 700
           PGG+LVIKLLES D Q FS+ICK  F+KA+WLRPKATRSSSREIYLICQGLR
Sbjct: 181 PGGHLVIKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  357 bits (916), Expect = 2e-96
 Identities = 176/232 (75%), Positives = 205/232 (88%)
 Frame = +2

Query: 5   MSGAGSPDFFYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQS 184
           MSGAG+PDFFYREAQRLGY+ARSAFKLLQ+Q ++KLITPG+SVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQS 60

Query: 185 LGPLKNGGKVVGIDLKKVKVPSAHCDSRVQTVCADVMNFPKDQARALSPKGNGFSVILSD 364
           LGPLKNGG VVGIDLKKVKVP+ +CD+RV+TVCADVMN P+DQ RALS +  GFSV+LSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSD 120

Query: 365 MCPLVSGITTKDAALSIELGMRALDLAVGIPCLPHSDDEIHEEKQSDGSSSGADENGILL 544
           MCP VSGITTKDAALS+ELGM+ALD+A+G     H DD    E Q+D S+SG ++NG+L 
Sbjct: 121 MCPPVSGITTKDAALSMELGMQALDIAIGGAASAHPDD----ENQNDDSTSGENDNGVLQ 176

Query: 545 PGGNLVIKLLESGDVQEFSQICKARFKKAAWLRPKATRSSSREIYLICQGLR 700
            GG+LVIKLLES D+QEF++ICK  F+KA+WLRPKATRSSSREIYLICQGL+
Sbjct: 177 AGGHLVIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  352 bits (904), Expect = 5e-95
 Identities = 179/231 (77%), Positives = 199/231 (86%)
 Frame = +2

Query: 5   MSGAGSPDFFYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQS 184
           MSGAG+PDFFYREAQRLGY+ARSAFKLLQ+Q K+KLI PG+SVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQS 60

Query: 185 LGPLKNGGKVVGIDLKKVKVPSAHCDSRVQTVCADVMNFPKDQARALSPKGNGFSVILSD 364
           LGPLKNGG VVGIDLKKVKVP  +CDSRVQTVCADVM  PK+Q RALSP+  GFSV+LSD
Sbjct: 61  LGPLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSD 120

Query: 365 MCPLVSGITTKDAALSIELGMRALDLAVGIPCLPHSDDEIHEEKQSDGSSSGADENGILL 544
           MCPLVSGITT+DAALS ELGM+AL LAVG     H  DEI  ++  + S   AD+NGIL 
Sbjct: 121 MCPLVSGITTRDAALSAELGMQALGLAVGRAATAHL-DEIRTDRLLNDSVCTADDNGILQ 179

Query: 545 PGGNLVIKLLESGDVQEFSQICKARFKKAAWLRPKATRSSSREIYLICQGL 697
           PGG+LVIKLLES D +EFS+ICK  F+KA+WLRPKATRSSSREIYLICQGL
Sbjct: 180 PGGHLVIKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  332 bits (850), Expect = 9e-89
 Identities = 168/232 (72%), Positives = 198/232 (85%), Gaps = 1/232 (0%)
 Frame = +2

Query: 5   MSGAGSPDFFYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQS 184
           MSGAG+PDFFYREAQRLGY+ARSAFKLLQ+QN++KLIT G+SVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 185 LGPLKNGGKVVGIDLKKVKVPSAHCDSRVQTVCADVMNFPKDQARALSPKGNGFSVILSD 364
           LGP +NGG V+GID+KKVKVP  HCDSRVQTV ADVMN PK + ++LSPK  GFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 365 MCPLVSGITTKDAALSIELGMRALDLAVGIPCLPHSDDEIHEEKQS-DGSSSGADENGIL 541
           MCPLVSGITT+DAALS+ELGM+A++LA+G   L   D    ++K S D S+S +D +G+L
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 542 LPGGNLVIKLLESGDVQEFSQICKARFKKAAWLRPKATRSSSREIYLICQGL 697
             GG+LV+KLLES D QEFS++ K  F+KA+WLRPKATRSSSREIYLICQ L
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  327 bits (838), Expect = 2e-87
 Identities = 165/238 (69%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
 Frame = +2

Query: 5   MSGAGSPDFFYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQS 184
           M+ +G+PDFFY+EAQRLGY+ARSAFKL+Q+Q ++KLI PG+SVLDLGCAPG+WLQVACQS
Sbjct: 1   MAKSGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQS 60

Query: 185 LGPLKNGGKVVGIDLKKVKVPSAHCDSRVQTVCADVMNFPKDQARALSPKGNGFSVILSD 364
           LGP  NGG V+GID KKVKVP++HCDSRV+TV ADVM  PK Q R LSPK  GFSVILSD
Sbjct: 61  LGPFHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSD 120

Query: 365 MCPLVSGITTKDAALSIELGMRALDLAVG-IPCLPHSDDEIHEEKQSDGSSSGADENGIL 541
           MCPLVSGITTKDAALS ELGMRALDLAVG +  + +SD +  +E +     SGAD+ G+L
Sbjct: 121 MCPLVSGITTKDAALSFELGMRALDLAVGKVASVCNSDGDNLDEVKERCDPSGADDGGLL 180

Query: 542 LPGGNLVIKLLESGDVQEFSQICKARFKKAAWLRPKATRSSSREIYLICQGLR**VRI 715
             GG+LV+KLLES D +E +QICK  F K+ WLRPKATR SSREIYLICQGL+  ++I
Sbjct: 181 RVGGHLVVKLLESEDAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGLKSEIKI 238