BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017393
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   632   e-179
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   632   e-178
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   625   e-177
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   624   e-176
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   604   e-170

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
            gi|223540085|gb|EEF41662.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 436

 Score =  632 bits (1631), Expect = e-179
 Identities = 316/426 (74%), Positives = 351/426 (82%), Gaps = 1/426 (0%)
 Frame = -3

Query: 1429 ESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQEADKA 1250
            ESVKLFVGQVPKHM+E +LL+MFKE ALVDEVN+IKDKTTRASRGCCF+ICPSRQEADKA
Sbjct: 13   ESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72

Query: 1249 VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAEVSALFSQYGTIKDL 1070
            VNACHNK+TLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+AEVS LFS YGTIKDL
Sbjct: 73   VNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSELFSTYGTIKDL 132

Query: 1069 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKEXXXXXX 890
            QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE      
Sbjct: 133  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192

Query: 889  XXXXXXXXSVPNTDSAQQPSLFGALPMGYIPPYNGFGYQAPGTYGLMQYPLPPMQNQPGF 710
                    ++PN DS Q PSLFGALPMGY+P YNG+GYQAPGTYGLM Y LPP+Q+QP F
Sbjct: 193  QKVQSQASNLPNADS-QHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPPLQSQPAF 251

Query: 709  HNLIPPINRGNALR-GISPDLPPGIAHRNFVPMPSAGFIGSAYPSPPGLQYPIAYPGGIM 533
            H++IPP+N+GNALR G+ PDL P +  RN+  +P A ++GSAYP+ PG+QYP+AYPGG+M
Sbjct: 252  HSIIPPVNQGNALRGGVRPDLGPSMGPRNYA-LPPASYVGSAYPAVPGIQYPMAYPGGMM 310

Query: 532  SHRPMNSSHSLTPPAXXXXXXXXXXXXXXXXGVQVEGPPGANLFIYHIPQEFGDQELANA 353
            S RP++SS     P                 G Q+EGPPG+NLFIYHIPQEFGDQELA+A
Sbjct: 311  SPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEFGDQELASA 370

Query: 352  FQAFGMVLSAKVFVDKATGVSKCFGFVSYDSPAAAQAAINIMNGCXXXXXXXXXXXKRDN 173
            FQ +G VLSAKVFVDKATGVSKCFGFVSYDSP AAQ AIN+MNGC           KRDN
Sbjct: 371  FQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRDN 430

Query: 172  KQNKPY 155
            KQ+KPY
Sbjct: 431  KQSKPY 436



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 35/93 (37%), Positives = 58/93 (62%)
 Frame = -3

Query: 1444 GETEGESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQ 1265
            GE E    KLFVG +PK++SEAE+  +F     + ++ +++  + + S+GC FL   +++
Sbjct: 96   GELERLEHKLFVGMLPKNVSEAEVSELFSTYGTIKDLQILRG-SQQTSKGCAFLKYETKE 154

Query: 1264 EADKAVNACHNKRTLPGASSPLQVKYADGELER 1166
            +A  A+ A + K  + G+S PL VK+AD E ER
Sbjct: 155  QALAALEAINGKHKMEGSSVPLVVKWADTEKER 187


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera]
            gi|296086641|emb|CBI32276.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  632 bits (1629), Expect = e-178
 Identities = 315/426 (73%), Positives = 354/426 (83%), Gaps = 1/426 (0%)
 Frame = -3

Query: 1429 ESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQEADKA 1250
            +SVKLFVGQVPK+M+EA+LL+MFKE ALVDEVN+IKDK TRASRGCCF+ICPSRQEADKA
Sbjct: 13   DSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKA 72

Query: 1249 VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAEVSALFSQYGTIKDL 1070
            VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+AEVS+LFS+YGTIKDL
Sbjct: 73   VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDL 132

Query: 1069 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKEXXXXXX 890
            QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE      
Sbjct: 133  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKA 192

Query: 889  XXXXXXXXSVPNTDSAQQPSLFGALPMGYIPPYNGFGYQAPGTYGLMQYPLPPMQNQPGF 710
                    ++P+ DS Q PSLFGALP+GY+PPYNG+GYQAPG YGLMQY +PPMQ+Q  F
Sbjct: 193  QKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAF 252

Query: 709  HNLIPPINRGNALRGISPDLPPGIAHRNFVPMPSAGFIGSAYPSPPGLQYPIAYPGGIMS 530
            HN+IP +N+G+A+R I+PDL   +A RN+  +PSA ++GSAYP+ PGLQYP+AY GGIMS
Sbjct: 253  HNMIPQVNQGSAMRAIAPDLARAVAPRNYA-VPSASYMGSAYPALPGLQYPMAYHGGIMS 311

Query: 529  HRPMNSSHSLTPPAXXXXXXXXXXXXXXXXGVQVEGPPGANLFIYHIPQEFGDQELANAF 350
            H+P++ S    PPA                G QVEGPPGANLFIYHIPQEFGD ELA+AF
Sbjct: 312  HQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAF 371

Query: 349  QAFGMVLSAKVFVDKATGVSKCFGFVSYDSPAAAQAAINIMNGCXXXXXXXXXXXKRD-N 173
            Q FG VLSAKVFVDKATG SKCFGFVSYDSPA+AQ+AI++MNGC           KRD N
Sbjct: 372  QQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNN 431

Query: 172  KQNKPY 155
            KQNKPY
Sbjct: 432  KQNKPY 437



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 37/97 (38%), Positives = 61/97 (62%)
 Frame = -3

Query: 1444 GETEGESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQ 1265
            GE E    KLFVG +PK++SEAE+ S+F +   + ++ +++  + + S+GC FL   +++
Sbjct: 96   GELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRG-SQQTSKGCAFLKYETKE 154

Query: 1264 EADKAVNACHNKRTLPGASSPLQVKYADGELERLEHK 1154
            +A  A+ A + K  + G+S PL VK+AD E ER   K
Sbjct: 155  QALAALEAINGKHKMEGSSVPLVVKWADTEKERQARK 191


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  625 bits (1613), Expect = e-177
 Identities = 321/438 (73%), Positives = 354/438 (80%), Gaps = 1/438 (0%)
 Frame = -3

Query: 1468 EIETLNPSGETEGESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCC 1289
            E ++ + S  +  ESVKLFVGQVPK+M+EAELL+MFK+ ALVDEVN+IKDKTTRASRGCC
Sbjct: 1    EKKSSSSSSSSNEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCC 60

Query: 1288 FLICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAEV 1109
            FLICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+AEV
Sbjct: 61   FLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEV 120

Query: 1108 SALFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 929
            S LFS+YGTIKDLQILRGSQQTSK CAFLKYETKEQALAALE INGKHKMEGSSVPLVVK
Sbjct: 121  SDLFSKYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVK 180

Query: 928  WADTEKEXXXXXXXXXXXXXXSVPNTDSAQQPSLFGALPMGYIPPYNGFGYQAPGTYGLM 749
            WADTEKE              ++PNTDS Q PSLFGALPMGY PPYNG+GYQAPG YGLM
Sbjct: 181  WADTEKE--RQARRAQKAQSQAMPNTDS-QHPSLFGALPMGYAPPYNGYGYQAPGVYGLM 237

Query: 748  QYPLPPMQNQPGFHNLIPPINRGNALR-GISPDLPPGIAHRNFVPMPSAGFIGSAYPSPP 572
             Y LPPMQNQP FH+++PP+N+GN LR GI PDL P I+ RN+ P   A ++GSAYP+  
Sbjct: 238  PYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYAP---ATYMGSAYPTVT 294

Query: 571  GLQYPIAYPGGIMSHRPMNSSHSLTPPAXXXXXXXXXXXXXXXXGVQVEGPPGANLFIYH 392
            GLQYP+AYPG +M+HRP++SS     P                 GVQVEGPPGANLFIYH
Sbjct: 295  GLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGANLFIYH 354

Query: 391  IPQEFGDQELANAFQAFGMVLSAKVFVDKATGVSKCFGFVSYDSPAAAQAAINIMNGCXX 212
            IPQEFGDQELANAF+AFG VLSAKVFVDK TGVSKCFGFVSYDSPAAAQ AI +MNG   
Sbjct: 355  IPQEFGDQELANAFEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAAAQNAITMMNGFQL 414

Query: 211  XXXXXXXXXKRDNKQNKP 158
                     KRDNKQ+KP
Sbjct: 415  GGKKLKVQLKRDNKQSKP 432


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera]
          Length = 447

 Score =  624 bits (1608), Expect = e-176
 Identities = 315/436 (72%), Positives = 354/436 (81%), Gaps = 11/436 (2%)
 Frame = -3

Query: 1429 ESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQEADKA 1250
            +SVKLFVGQVPK+M+EA+LL+MFKE ALVDEVN+IKDK TRASRGCCF+ICPSRQEADKA
Sbjct: 13   DSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKA 72

Query: 1249 VNACHNKRTLPGASSPLQVKYADGELERL----------EHKLFVGMLPKNVSDAEVSAL 1100
            VNACHNKRTLPGASSPLQVKYADGELERL          EHKLFVGMLPKNVS+AEVS+L
Sbjct: 73   VNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGMLPKNVSEAEVSSL 132

Query: 1099 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 920
            FS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD
Sbjct: 133  FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 192

Query: 919  TEKEXXXXXXXXXXXXXXSVPNTDSAQQPSLFGALPMGYIPPYNGFGYQAPGTYGLMQYP 740
            TEKE              ++P+ DS Q PSLFGALP+GY+PPYNG+GYQAPG YGLMQY 
Sbjct: 193  TEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYR 252

Query: 739  LPPMQNQPGFHNLIPPINRGNALRGISPDLPPGIAHRNFVPMPSAGFIGSAYPSPPGLQY 560
            +PPMQ+Q  FHN+IP +N+G+A+R I+PDL   +A RN+  +PSA ++GSAYP+ PGLQY
Sbjct: 253  MPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYA-VPSASYMGSAYPALPGLQY 311

Query: 559  PIAYPGGIMSHRPMNSSHSLTPPAXXXXXXXXXXXXXXXXGVQVEGPPGANLFIYHIPQE 380
            P+AY GGIMSH+P++ S    PPA                G QVEGPPGANLFIYHIPQE
Sbjct: 312  PMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQE 371

Query: 379  FGDQELANAFQAFGMVLSAKVFVDKATGVSKCFGFVSYDSPAAAQAAINIMNGCXXXXXX 200
            FGD ELA+AFQ FG VLSAKVFVDKATG SKCFGFVSYDSPA+AQ+AI++MNGC      
Sbjct: 372  FGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKK 431

Query: 199  XXXXXKRD-NKQNKPY 155
                 KRD NKQNKPY
Sbjct: 432  LKVQLKRDNNKQNKPY 447


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  604 bits (1557), Expect = e-170
 Identities = 308/425 (72%), Positives = 343/425 (80%)
 Frame = -3

Query: 1429 ESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQEADKA 1250
            ESVKLFVGQVPKHM+E ELL+MFKE ALVDEVN+IKDK TRASRGCCF+ICPSR+EADKA
Sbjct: 13   ESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKA 72

Query: 1249 VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAEVSALFSQYGTIKDL 1070
            VNACHNKRTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVS+ E+SALFS+YGTIKDL
Sbjct: 73   VNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDL 132

Query: 1069 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKEXXXXXX 890
            QILRGSQQTSKGCAFLKYETKEQAL ALEAINGKHKMEGSSVPLVVKWADTEKE      
Sbjct: 133  QILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192

Query: 889  XXXXXXXXSVPNTDSAQQPSLFGALPMGYIPPYNGFGYQAPGTYGLMQYPLPPMQNQPGF 710
                    +VP+TDS Q PSLFGALPM Y+PPYNG+GYQAP  YGLM Y +PPMQ+Q G+
Sbjct: 193  QKAQSQASNVPHTDS-QHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPYRMPPMQSQHGY 251

Query: 709  HNLIPPINRGNALRGISPDLPPGIAHRNFVPMPSAGFIGSAYPSPPGLQYPIAYPGGIMS 530
            HN++P +N+GNALR   PDL P +  RN+  +P A ++GS YP+ PGLQ+P+AYP G++S
Sbjct: 252  HNMMPHMNQGNALR---PDLGPNMNPRNY-HVPPASYVGS-YPAVPGLQHPMAYPTGMIS 306

Query: 529  HRPMNSSHSLTPPAXXXXXXXXXXXXXXXXGVQVEGPPGANLFIYHIPQEFGDQELANAF 350
             RPMN+S     PA                G Q EGPPGANLFIYHIPQEFGDQELA AF
Sbjct: 307  PRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQEFGDQELATAF 366

Query: 349  QAFGMVLSAKVFVDKATGVSKCFGFVSYDSPAAAQAAINIMNGCXXXXXXXXXXXKRDNK 170
            Q FG VLSAKVFVDKATGVSKCFGFVSYD+P AAQ+AI++MNGC           KRDNK
Sbjct: 367  QPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNK 426

Query: 169  QNKPY 155
            Q KPY
Sbjct: 427  QGKPY 431



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 33/93 (35%), Positives = 59/93 (63%)
 Frame = -3

Query: 1444 GETEGESVKLFVGQVPKHMSEAELLSMFKEVALVDEVNVIKDKTTRASRGCCFLICPSRQ 1265
            GE E    KLF+G +PK++SE E+ ++F +   + ++ +++  + + S+GC FL   +++
Sbjct: 96   GELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQILRG-SQQTSKGCAFLKYETKE 154

Query: 1264 EADKAVNACHNKRTLPGASSPLQVKYADGELER 1166
            +A  A+ A + K  + G+S PL VK+AD E ER
Sbjct: 155  QALTALEAINGKHKMEGSSVPLVVKWADTEKER 187