BLASTX nr result

ID: Cimicifuga21_contig00017389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017389
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258...   194   6e-52
dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]           135   6e-51
emb|CAA40555.1| TNP2 [Antirrhinum majus]                              172   5e-47
ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245...   182   1e-43
ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261...   167   6e-39

>ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258569 [Vitis vinifera]
          Length = 783

 Score =  194 bits (492), Expect(2) = 6e-52
 Identities = 148/393 (37%), Positives = 193/393 (49%), Gaps = 39/393 (9%)
 Frame = -1

Query: 1064 GILPTYVCWTKHVEDE--EVYNSQ--ESNDGDDMRGMLQDALGLP--NMVGISSNILNEP 903
            GI   YV W  H E E  E  N+   ES+  D+M+ ML DA G+P  N     S  ++E 
Sbjct: 64   GIARNYVRWLMHGEFEFCEPTNTSTNESDMHDEMQEMLNDAFGMPMPNEESERSRHVHEE 123

Query: 902  SSSEPCFDEQNVEAQNF*KLLKEADTPLYPGL*YKF*IVFSRTIASCKVLTVGVIIHSTF 723
                  F++ N +A  F  LL+EA+  LYP                CK  T    I   F
Sbjct: 124  ------FEKPNEDANKFYNLLREAEQELYP---------------RCKKFTKLFFIIRLF 162

Query: 722  CFKC*T----IHFLMI-----------SICPRIIMKQKKQLQDLGMDCIKIDACPNDCML 588
              KC        F M+              P    + KK L+DLG+  IKIDACP+DCML
Sbjct: 163  HMKCLNGWSNKSFTMLLELLKDAFPEGETLPSNYYEAKKILRDLGLHYIKIDACPSDCML 222

Query: 587  YLRNETRKRINVIYVVSRGGK*LHVSL------VRKELIHQKSKR-----KKLQKCCDIS 441
            Y +        V+  VSR       S        +K+ I  K  R      +LQ+    S
Sbjct: 223  YSKEYANANECVVCGVSRWKSSDEHSTDEFTNSAKKKKIPAKVLRYFPLKPRLQRLYMSS 282

Query: 440  H*SQGFKGYLC------VQKHPRT*YGMLIVVRKTNL*SILLTQAWKYLDKKYLSFSVES 279
              +   K ++       + +HP                  + + AWK  D  + SF++E 
Sbjct: 283  KTASHMKWHVDGRMEGEMMRHP------------------VDSLAWKNFDNVHPSFALEP 324

Query: 278  RNVRLGLASDGFNLFGNMSTTHSSW-YVLVPYNLPPWMCMK*LYFMMLLLIPGPNSPGNN 102
            RNVRLGLASDGFN FGNMS ++S W  VL+PYNLPPWMCMK  +FM+ LLIP P +PGN+
Sbjct: 325  RNVRLGLASDGFNPFGNMSISYSMWPVVLIPYNLPPWMCMKQTFFMLSLLIPSPTAPGND 384

Query: 101  IDVFSRPLIDELNELWTDWVETYDAYLKQNFQM 3
            ID++ +PLIDELN+LW   +ETYDA  KQNF M
Sbjct: 385  IDIYLQPLIDELNDLWDVGLETYDASTKQNFCM 417



 Score = 38.5 bits (88), Expect(2) = 6e-52
 Identities = 19/64 (29%), Positives = 39/64 (60%)
 Frame = -2

Query: 1258 MDKSWMHPTVGKCSREYILGCKKFLEYAWNNRPAEFGDEIYCPCVGCINKVLRCKDEVEK 1079
            +DKSWM  +  + S EY  G  +FL++A+++   +  + + CPC+ C N +++ ++ +  
Sbjct: 3    IDKSWMQKS--RVSSEYYKGVLEFLDFAFSSALGK--EMLPCPCIRCNNCLMQKREIMYD 58

Query: 1078 HSLE 1067
            H L+
Sbjct: 59   HLLD 62


>dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]
          Length = 606

 Score =  135 bits (340), Expect(2) = 6e-51
 Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 AWKYLDKKYLSFSVESRNVRLGLASDGFNLFGNMSTTHSSW-YVLVPYNLPPWMCMK*LY 150
           +WK  D +Y +FS E RNVRLGLA+DGFN FGNMS+ HS+W  VL  YNLPPW+CMK   
Sbjct: 322 SWKEFDIRYPNFSREPRNVRLGLAADGFNPFGNMSSAHSTWPVVLTTYNLPPWLCMKESS 381

Query: 149 FMMLLLIPGPNSPGNNIDVFSRPLIDELNELWTDWVETYDAYLKQNFQM 3
           FM+ LLIPGP SPG ++DVF +PL+DELN LW   V T DA     F M
Sbjct: 382 FMLSLLIPGPKSPGKDMDVFLKPLVDELNYLWQSGVRTKDAATNTFFTM 430



 Score = 93.6 bits (231), Expect(2) = 6e-51
 Identities = 52/141 (36%), Positives = 73/141 (51%)
 Frame = -3

Query: 753 NSWSNHSFDILLQVLNDSLSDDINMPKNHYEAKKTTSGSWYGLH*DRCMPK*LYVVLKKR 574
           N W+N SFD LL++L  S  +   +P +HY AKKT      G      + K    +  K 
Sbjct: 191 NKWTNSSFDELLELLQSSHPEGNKIPPSHYVAKKTLKKIGLGYE-SIHVCKNDCALFWKE 249

Query: 573 DEEKDQCDICGESRWKMTSCESGEEGTDSSKKQKKKAAEVLRYFPLKPRLQRLFMCSKAS 394
                 C +C ESRW            D++ K KK   +VLRYFPL PRL+RL+     +
Sbjct: 250 HHSLHNCPVCNESRW-----------VDTNTKGKKVPHKVLRYFPLTPRLRRLYCSRHTA 298

Query: 393 KDMIWHADSRTKDEPLKHPAD 331
           KDMIWH+  R+++  ++HP D
Sbjct: 299 KDMIWHSTGRSEEGTMRHPVD 319


>emb|CAA40555.1| TNP2 [Antirrhinum majus]
          Length = 752

 Score =  172 bits (436), Expect(2) = 5e-47
 Identities = 132/376 (35%), Positives = 182/376 (48%), Gaps = 22/376 (5%)
 Frame = -1

Query: 1064 GILPTYVCWTKHVEDEEVYNSQES------NDGDDMRGMLQDALGLPNMVGISSNILNEP 903
            G +  Y  W  H E     NSQ +      N  +DM  ++ DA G+ +      NI +E 
Sbjct: 67   GFIKGYTHWVIHGEGSS--NSQNNIQNERLNTFEDMHNLVHDAFGVED-----DNINSEE 119

Query: 902  SSSEPCFDEQNVEAQNF*KLLKEADTPLYPGL*YKF*IVFSRTIASCKVLTVGVIIHSTF 723
              +E   +E N EA+ F KLL +A   LYPG      + F   +   K L  G   + TF
Sbjct: 120  EPNEE--EEPNEEAKTFYKLLDDAQQELYPGCKDFSRLRFIVRLFHLKCL--GKWSNKTF 175

Query: 722  CFKC*TIHFLM---ISICPRIIMKQKKQLQDLGMDCIKIDACPNDCMLYLRNETRKRINV 552
                  +        +  P+   + +K +  LG+ C+KIDACPNDCMLY +         
Sbjct: 176  TMLLELLKEAFPEQTNSLPKSYYEVQKIIGALGLTCVKIDACPNDCMLYRKEHANDDACH 235

Query: 551  IYVVSRGGK*LHVSLVRKELIHQKSKR------------KKLQKCCDISH*SQGFKGYLC 408
            +   SR  +  + S V +E    K KR             +LQ+       S     ++ 
Sbjct: 236  VCNTSRYIEGENNS-VSEEASSSKCKRVPAKVLRYFPLKPRLQRLFT----SSKTASFMR 290

Query: 407  VQKHPRT*YGMLIVVRKTNL*SILLTQAWKYLDKKYLSFSVESRNVRLGLASDGFNLFGN 228
              K  RT  G L     + L        W   D ++  F+ + RN+RLGLA+DGFN F  
Sbjct: 291  WHKEERTKDGQLRHPSDSPL--------WHAFDHQHPDFAEDPRNIRLGLAADGFNPFRT 342

Query: 227  MSTTHSSW-YVLVPYNLPPWMCMK*LYFMMLLLIPGPNSPGNNIDVFSRPLIDELNELWT 51
            MS  HS+W  +L PYN+PPWMCMK  +F + LLIPGP+ PGNNIDV+ +PLI+EL ELW 
Sbjct: 343  MSVAHSTWPVILTPYNIPPWMCMKEPFFFLTLLIPGPSPPGNNIDVYMQPLIEELQELW- 401

Query: 50   DWVETYDAYLKQNFQM 3
              V TYDA  K+NF +
Sbjct: 402  GGVNTYDASAKENFNV 417



 Score = 43.5 bits (101), Expect(2) = 5e-47
 Identities = 22/65 (33%), Positives = 36/65 (55%)
 Frame = -2

Query: 1270 YFVVMDKSWMHPTVGKCSREYILGCKKFLEYAWNNRPAEFGDEIYCPCVGCINKVLRCKD 1091
            Y   MDKSWMH +  + + EY  G  +FL++A++N       +I CPC  C N +   ++
Sbjct: 2    YSFTMDKSWMHKS--RLTEEYENGLDQFLDFAFDN--VCLNGKIICPCKQCKNALWMDRE 57

Query: 1090 EVEKH 1076
              ++H
Sbjct: 58   TAKEH 62


>ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245099 [Vitis vinifera]
          Length = 1264

 Score =  182 bits (463), Expect = 1e-43
 Identities = 135/364 (37%), Positives = 177/364 (48%), Gaps = 37/364 (10%)
 Frame = -1

Query: 983 DDMRGMLQDALGLPNMVGISSNILNEPSSSEPC----FDEQNVEAQNF*KLLKEADTPLY 816
           D+M+ ML DA  +P        + NE S   P     F++ N +A  F  LL+EA+  LY
Sbjct: 3   DEMQEMLNDAFRMP--------MPNEESERSPHVHEEFEKPNEDANKFYNLLREAEQELY 54

Query: 815 PGL*YKF*IVFSRTIASCKVLTVGVIIHSTFCFKC*T----IHFLMI-----------SI 681
           PG               CK  T    I   F  KC        F M+             
Sbjct: 55  PG---------------CKKFTKLSFIIRLFLMKCFNGWSNKSFTMLLELLKEAFPEGET 99

Query: 680 CPRIIMKQKKQLQDLGMDCIKIDACPNDCMLYLRNETRKRINVIYVVSRG------GK*L 519
            P    + KK L+DLG+  IKIDACP+DCMLY +        V+  VSR           
Sbjct: 100 LPSNYYEAKKILRDLGLHYIKIDACPSDCMLYSKKHANANECVVCGVSRWKSSDDHSTDE 159

Query: 518 HVSLVRKELIHQKSKR-----KKLQKCCDISH*SQGFKGYLC------VQKHPRT*YGML 372
             +  +K+ I  K  R      +LQ+    +  +   K ++       + +HP       
Sbjct: 160 FTNSAKKKKIPAKVLRFFPLKPRLQRLYMSAKTASHMKWHVDGRMEDEMMRHPAD----- 214

Query: 371 IVVRKTNL*SILLTQAWKYLDKKYLSFSVESRNVRLGLASDGFNLFGNMSTTHSSW-YVL 195
                        + AWK  D  + SF++E RNVRLGLASDGFN FGNMS ++S W  VL
Sbjct: 215 -------------SLAWKNFDNVHPSFALEPRNVRLGLASDGFNPFGNMSISYSMWPVVL 261

Query: 194 VPYNLPPWMCMK*LYFMMLLLIPGPNSPGNNIDVFSRPLIDELNELWTDWVETYDAYLKQ 15
           +PYNLPPWM MK  +FM+ LLIPGP + GN+ID++ +PLIDELN+LW   VETYDA  KQ
Sbjct: 262 IPYNLPPWMYMKQTFFMLSLLIPGPTALGNDIDIYLQPLIDELNDLWDVGVETYDASTKQ 321

Query: 14  NFQM 3
           NF M
Sbjct: 322 NFCM 325


>ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]
          Length = 1410

 Score =  167 bits (423), Expect = 6e-39
 Identities = 129/346 (37%), Positives = 172/346 (49%), Gaps = 12/346 (3%)
 Frame = -1

Query: 1004 SQESNDGDDMRGMLQDALGLPNMVGISSNILNEPSSSEPCFDEQNVEAQNF*KLLKEADT 825
            + + +D D+M  +L D  G          I N  ++SE      NVE ++F +LL EA  
Sbjct: 89   NDDVDDDDEMIELLSDVCG---------PIPNRDATSETT----NVETKHFDELLGEAGK 135

Query: 824  PLYPGL*YKF*IVFSRTIASCKVLTVGVIIHSTFCFKC*TIHFLMISICPRIIMKQKKQL 645
             L+ G  +   + F   +   KVL            +  +  F   +  P      KK L
Sbjct: 136  KLFTGSKFSS-LTFIVKLMHLKVLNHWSNKSFDMLLELLSEIFPEGTNLPSCTYDAKKML 194

Query: 644  QDLGMDCIKIDACPNDCMLYLR-----------NETRKRINVIYVVSRGGK*LHVSLVRK 498
            +DLG+   KI AC  DC L+ +           +E R +IN      +G K  H SL   
Sbjct: 195  RDLGLGYEKIHACKFDCALFWKENEFLDKCPICDEDRYKIND----GKGKKIPHKSLRFF 250

Query: 497  ELIHQKSKRKKLQKCCDISH*SQGFKGYLCVQKHPRT*YGMLIVVRKTNL*SILLTQAWK 318
             L      + +LQ+     H +   + +    K  R   G+L              +AWK
Sbjct: 251  PL------KPRLQRLFMSRHTASDMRWH----KEKRVDDGVLRHPADA--------EAWK 292

Query: 317  YLDKKYLSFSVESRNVRLGLASDGFNLFGNMSTTHSSW-YVLVPYNLPPWMCMK*LYFMM 141
              D+ Y SFS ESRNVRLGL+SDGFN FGNMS ++S W  +LVPYNLPPW CMK  + MM
Sbjct: 293  SFDRMYPSFSSESRNVRLGLSSDGFNPFGNMSHSYSMWPVILVPYNLPPWKCMKEPFLMM 352

Query: 140  LLLIPGPNSPGNNIDVFSRPLIDELNELWTDWVETYDAYLKQNFQM 3
             LLIPGP+SPG  IDV+ RPLIDEL ELW D +ETYD  + Q F+M
Sbjct: 353  SLLIPGPHSPGKEIDVYLRPLIDELKELWHDGIETYDVSIGQYFKM 398


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