BLASTX nr result

ID: Cimicifuga21_contig00017342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017342
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...   381   e-103
emb|CBI31361.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase s...   339   6e-91
ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [S...   338   7e-91
gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| T...   335   1e-89

>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
           vinifera]
          Length = 399

 Score =  381 bits (979), Expect = e-103
 Identities = 183/233 (78%), Positives = 200/233 (85%)
 Frame = -2

Query: 883 TVRWLDECIALDPAGGTYAFGAIVGGSNVEERIRCAQEVARRHVSGYWIGGFGLGESAEE 704
           T+RWLDECI L PAGG   FGAIVGG+NVEER RCAQEVA R+VSGYWIGGFGLGES +E
Sbjct: 166 TLRWLDECITLSPAGGA-VFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDE 224

Query: 703 RPALLNAVTDALPKEKPRQICGLGLPEEVLQGVASGVDLFDSTYIYHLTLGGFALIFPLN 524
           RPALLNAV D LP E+PRQICGL LPEEVLQGVA+G+DLFDSTYIYHLTLGGFAL FPL 
Sbjct: 225 RPALLNAVADILPVERPRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLE 284

Query: 523 RSERHISDSELSATGGDHTKINLRATVYRKDTSPIADNCSCYTCQNHTRAYINHLLNVHE 344
             +RH  DS LS  G DHTKINLRAT+YRKDT+PI DNC+CYTCQNHTRAYINHLLNVHE
Sbjct: 285 SIQRHEFDSRLSDVGSDHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHE 344

Query: 343 MLAQILLEIHNTHHYLGFFRTIREAIKTGQFDHFYQSFIEGRREHLAVAAACS 185
           MLAQILLEIHNTHHYLGFFR+IR AIK   F+ F Q+FI+ RREHL + A C+
Sbjct: 345 MLAQILLEIHNTHHYLGFFRSIRTAIKEDNFEQFRQTFIDSRREHLNMTAVCA 397


>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  377 bits (969), Expect = e-102
 Identities = 182/230 (79%), Positives = 198/230 (86%)
 Frame = -2

Query: 883 TVRWLDECIALDPAGGTYAFGAIVGGSNVEERIRCAQEVARRHVSGYWIGGFGLGESAEE 704
           T+RWLDECI L PAGG   FGAIVGG+NVEER RCAQEVA R+VSGYWIGGFGLGES +E
Sbjct: 166 TLRWLDECITLSPAGGA-VFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDE 224

Query: 703 RPALLNAVTDALPKEKPRQICGLGLPEEVLQGVASGVDLFDSTYIYHLTLGGFALIFPLN 524
           RPALLNAV D LP E+PRQICGL LPEEVLQGVA+G+DLFDSTYIYHLTLGGFAL FPL 
Sbjct: 225 RPALLNAVADILPVERPRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLE 284

Query: 523 RSERHISDSELSATGGDHTKINLRATVYRKDTSPIADNCSCYTCQNHTRAYINHLLNVHE 344
             +RH  DS LS  G DHTKINLRAT+YRKDT+PI DNC+CYTCQNHTRAYINHLLNVHE
Sbjct: 285 SIQRHEFDSRLSDVGSDHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHE 344

Query: 343 MLAQILLEIHNTHHYLGFFRTIREAIKTGQFDHFYQSFIEGRREHLAVAA 194
           MLAQILLEIHNTHHYLGFFR+IR AIK   F+ F Q+FI+ RREHL + A
Sbjct: 345 MLAQILLEIHNTHHYLGFFRSIRTAIKEDNFEQFRQTFIDSRREHLNMTA 394


>ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like
           [Cucumis sativus] gi|449490166|ref|XP_004158527.1|
           PREDICTED: queuine tRNA-ribosyltransferase subunit
           qtrtd1-like [Cucumis sativus]
          Length = 399

 Score =  339 bits (869), Expect = 6e-91
 Identities = 162/228 (71%), Positives = 188/228 (82%)
 Frame = -2

Query: 883 TVRWLDECIALDPAGGTYAFGAIVGGSNVEERIRCAQEVARRHVSGYWIGGFGLGESAEE 704
           TV+WLDECIAL+  GG   FGAIVGG+++EER RCA EV +R+VSGYWIGGFG GES +E
Sbjct: 166 TVKWLDECIALNSTGGA-VFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDE 224

Query: 703 RPALLNAVTDALPKEKPRQICGLGLPEEVLQGVASGVDLFDSTYIYHLTLGGFALIFPLN 524
           RP+LL+AVTD LP+E PR ICGLGLPEEVLQG+A+GVDLFDS YIYHLTLGGFAL FPL+
Sbjct: 225 RPSLLDAVTDVLPEEMPRMICGLGLPEEVLQGIAAGVDLFDSAYIYHLTLGGFALTFPLD 284

Query: 523 RSERHISDSELSATGGDHTKINLRATVYRKDTSPIADNCSCYTCQNHTRAYINHLLNVHE 344
                  D+ L     D TKINLRA V+RKDTSPI + C+CYTC NHT+AYINHLLNVHE
Sbjct: 285 GIVEKQPDAHLIDNASDMTKINLRAIVFRKDTSPILEGCNCYTCLNHTKAYINHLLNVHE 344

Query: 343 MLAQILLEIHNTHHYLGFFRTIREAIKTGQFDHFYQSFIEGRREHLAV 200
           MLAQILLEIHNT+HYLGFF++IREAIK G+F  F+Q F+E RR HL +
Sbjct: 345 MLAQILLEIHNTYHYLGFFQSIREAIKVGKFQQFHQKFVEERRNHLTL 392


>ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [Sorghum bicolor]
           gi|241921214|gb|EER94358.1| hypothetical protein
           SORBIDRAFT_01g026340 [Sorghum bicolor]
          Length = 401

 Score =  338 bits (868), Expect = 7e-91
 Identities = 161/230 (70%), Positives = 191/230 (83%)
 Frame = -2

Query: 883 TVRWLDECIALDPAGGTYAFGAIVGGSNVEERIRCAQEVARRHVSGYWIGGFGLGESAEE 704
           T+RWLD CIALD A GT +FG IVGGS++E+R  CA EV++R+VSG+WI GFGLGES EE
Sbjct: 171 TLRWLDACIALDVASGTNSFGVIVGGSSLEQRKLCATEVSKRNVSGFWIAGFGLGESIEE 230

Query: 703 RPALLNAVTDALPKEKPRQICGLGLPEEVLQGVASGVDLFDSTYIYHLTLGGFALIFPLN 524
           R +LLNAVTD LP EKPR +  LGLPEEVL+GVA+G+DLFDSTYIY LT+GGFALIFP++
Sbjct: 231 RCSLLNAVTDCLPPEKPRLVSRLGLPEEVLEGVAAGIDLFDSTYIYQLTMGGFALIFPVD 290

Query: 523 RSERHISDSELSATGGDHTKINLRATVYRKDTSPIADNCSCYTCQNHTRAYINHLLNVHE 344
             ER + +  L+ +GGD TKINLRAT YRKD S + D+C+C+TCQNHTRAY+NHLLNVHE
Sbjct: 291 MVEREMQNGILNTSGGDSTKINLRATTYRKDMSRLVDSCNCFTCQNHTRAYLNHLLNVHE 350

Query: 343 MLAQILLEIHNTHHYLGFFRTIREAIKTGQFDHFYQSFIEGRREHLAVAA 194
           MLAQILLEIHNTHHYL FFR+IREAIK G+FD F Q F++ RR H A  A
Sbjct: 351 MLAQILLEIHNTHHYLRFFRSIREAIKVGEFDLFRQEFVKKRRAHFAALA 400


>gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| TPA: hypothetical
           protein ZEAMMB73_649296 [Zea mays]
          Length = 398

 Score =  335 bits (858), Expect = 1e-89
 Identities = 158/227 (69%), Positives = 187/227 (82%)
 Frame = -2

Query: 883 TVRWLDECIALDPAGGTYAFGAIVGGSNVEERIRCAQEVARRHVSGYWIGGFGLGESAEE 704
           T+RWLD CIALD A GT +FG IVGGS++E+R  CA EV++R+VSG+WI GFG GES EE
Sbjct: 168 TLRWLDACIALDVASGTNSFGVIVGGSSLEQRKLCATEVSKRNVSGFWIAGFGFGESIEE 227

Query: 703 RPALLNAVTDALPKEKPRQICGLGLPEEVLQGVASGVDLFDSTYIYHLTLGGFALIFPLN 524
           R  LLNA TD LP+EKPR +  LGLPEEVL+GVA+G+DLFDSTYIY LT+GGFALIFP++
Sbjct: 228 RCTLLNATTDCLPREKPRLVSRLGLPEEVLEGVAAGIDLFDSTYIYQLTMGGFALIFPVD 287

Query: 523 RSERHISDSELSATGGDHTKINLRATVYRKDTSPIADNCSCYTCQNHTRAYINHLLNVHE 344
             ER + +  L+ T GD TKINLRAT YRKDTS + D+C+C+TCQNHTRAY+NHLLNVHE
Sbjct: 288 MVEREMQNGVLNTTDGDSTKINLRATTYRKDTSRLVDSCNCFTCQNHTRAYLNHLLNVHE 347

Query: 343 MLAQILLEIHNTHHYLGFFRTIREAIKTGQFDHFYQSFIEGRREHLA 203
           MLAQILLEIHNTHHYL FF +IREAIK G+FD F Q F++ RR H A
Sbjct: 348 MLAQILLEIHNTHHYLRFFHSIREAIKVGEFDLFRQEFVKKRRTHFA 394


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