BLASTX nr result

ID: Cimicifuga21_contig00017304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017304
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69089.1| hypothetical protein VITISV_009157 [Vitis vinifera]    56   3e-06
emb|CBI29848.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002277987.1| PREDICTED: putative disease resistance prote...    55   4e-06
ref|XP_002302941.1| cc-nbs-lrr resistance protein [Populus trich...    55   8e-06
ref|XP_002277498.1| PREDICTED: putative disease resistance prote...    54   1e-05

>emb|CAN69089.1| hypothetical protein VITISV_009157 [Vitis vinifera]
          Length = 815

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = -3

Query: 213 IRESFKEIEADRS-FQLQTRV---EEKRVYNSGREQTHSYVVEESVIGRGVDKENIVKLL 46
           +RES  +I AD+S F L  RV   +   + +  RE THSYV   ++IGR  DKENIV +L
Sbjct: 149 LRESLDKIAADKSKFNLTERVVVVDGAHLVHRKREMTHSYVDASNIIGREQDKENIVSIL 208

Query: 45  L--DANEQESVSVIAI 4
           +   ++EQE+VSVI I
Sbjct: 209 MQSSSDEQENVSVIPI 224


>emb|CBI29848.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
 Frame = -3

Query: 213 IRESFKEIEADRS-FQLQTRV---EEKRVYNSGREQTHSYVVEESVIGRGVDKENIVKLL 46
           +RES  +I AD+S F L  RV   +   V +  RE  HSYV   ++IGR  DKENIV +L
Sbjct: 75  LRESLDKIAADKSKFNLTERVVVVDGAHVVHRKREMAHSYVDASNIIGRDQDKENIVSIL 134

Query: 45  L--DANEQESVSVIAI 4
           +   ++EQE+VSVI I
Sbjct: 135 MQSSSDEQENVSVIPI 150


>ref|XP_002277987.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 874

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
 Frame = -3

Query: 213 IRESFKEIEADRS-FQLQTR---VEEKRVYNSGREQTHSYVVEESVIGRGVDKENIVKLL 46
           ++E   +I ADRS F L  R   V+   V +  RE THSYV   ++IGR  DKENIV +L
Sbjct: 125 LKERLDKIAADRSKFNLTERAVVVDTTHVVHRKREMTHSYVDVSNIIGREQDKENIVSIL 184

Query: 45  L--DANEQESVSVIAI 4
           +   ++EQE+VSVI I
Sbjct: 185 MKSSSDEQENVSVIPI 200


>ref|XP_002302941.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844667|gb|EEE82214.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 875

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = -3

Query: 213 IRESFKEIEADRS---FQLQTRVEEKRVYNSGREQTHSYVVEESVIGRGVDKENIVKLLL 43
           IRE+  EI  DRS   F +Q+  + K V    REQT S VV   VIGR VDKE I+KLLL
Sbjct: 125 IRENMDEIAEDRSKFHFTVQSGRDGKAVPLK-REQTGS-VVSSEVIGREVDKEAIIKLLL 182

Query: 42  DANEQESVSVIAI 4
            +NE+E+V++I I
Sbjct: 183 SSNEKENVTIIPI 195


>ref|XP_002277498.1| PREDICTED: putative disease resistance protein RGA3 [Vitis
           vinifera]
          Length = 848

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -3

Query: 213 IRESFKEIEADRS-FQLQTRVEEKRVYNSGREQTHSYVVEESVIGRGVDKENIVKLLLDA 37
           IR    +I AD+S F L   V    V  S RE THS+V    VIGR  DKENIV LL+  
Sbjct: 125 IRGRLDKIAADKSKFNLIEAVANTPVVLSKREMTHSFVRASDVIGRDDDKENIVGLLMQP 184

Query: 36  NEQESVSVIAI 4
           ++ E+VSVI I
Sbjct: 185 SDTENVSVIPI 195


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