BLASTX nr result

ID: Cimicifuga21_contig00017293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017293
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142905.1| PREDICTED: uncharacterized protein LOC101212...   260   5e-67
ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257...   253   5e-65
ref|XP_002510050.1| conserved hypothetical protein [Ricinus comm...   250   4e-64
ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp....   244   2e-62
ref|NP_564492.1| uncharacterized protein [Arabidopsis thaliana] ...   243   5e-62

>ref|XP_004142905.1| PREDICTED: uncharacterized protein LOC101212562 [Cucumis sativus]
           gi|449529905|ref|XP_004171938.1| PREDICTED:
           uncharacterized protein LOC101228828 [Cucumis sativus]
          Length = 260

 Score =  260 bits (664), Expect = 5e-67
 Identities = 139/242 (57%), Positives = 163/242 (67%), Gaps = 1/242 (0%)
 Frame = +2

Query: 119 QFPNQNPKSLFSRKTKFISR-NPRKPLNLTLATNAEXXXXXXXXXXXXXXXXXXXFNDDE 295
           +F N NP     R++KFI R NP KP N+TL+  AE                   F +D+
Sbjct: 26  KFSNPNP----FRRSKFIPRRNPTKPFNITLS-KAEGTVDSTKQALSNSPTPPP-FPNDQ 79

Query: 296 TIFVGDERIPLEGVIQFDKPPNFSMQLNKWGRXXXXXXXXXXXXXXFSAIGRFSHGFPVF 475
           T+FVGDE +PLEGVIQFDKP N S +L KWGR              FS+IGRFSHG PVF
Sbjct: 80  TVFVGDENVPLEGVIQFDKP-NTSSRLTKWGRVAFLAGGDVLALLLFSSIGRFSHGLPVF 138

Query: 476 DIETLHTADPFIAGWFLSAYFLXXXXXXXXXXXXXXKAVIAAAKSWAVGIPLGVIIRSAT 655
           D ETL TADPFIAGWFLSAYFL              KAV+AA KSWA+GIPLG+++R+AT
Sbjct: 139 DFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVAATKSWALGIPLGLLVRAAT 198

Query: 656 SGHIPPVRFMLVTMGATAVLLIGWRALLFTILPNDKGKKNDVYRRGSPFELFELLTSLVR 835
           SGH+PP  F+ VTMG+TAVLLIGWRA+L+ + P    KKNDVYRRG+PFELFELLTSLVR
Sbjct: 199 SGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKNDVYRRGNPFELFELLTSLVR 258

Query: 836 RW 841
           RW
Sbjct: 259 RW 260


>ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257450 [Vitis vinifera]
           gi|302142160|emb|CBI19363.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  253 bits (647), Expect = 5e-65
 Identities = 141/266 (53%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
 Frame = +2

Query: 47  MFLVTQAPNGRCXXXXXXXXXXXXQFPNQNPKSLFSRKTKFISRNPRKPLNLTLA-TNAE 223
           M LV+QA +G              +F    P +LFS +     ++ R+ L++TLA  +  
Sbjct: 1   MLLVSQAASGGLSGRACCSFSPPPKFSKPKP-TLFSNR-----KSSRRTLHITLAKADGG 54

Query: 224 XXXXXXXXXXXXXXXXXXXFNDDETIFVGDERIPLEGVIQFDKPPNFSMQLNKWGRXXXX 403
                               N+D T+FVG E +PLEGVIQF+KP   + +L KWGR    
Sbjct: 55  LDSTPAAKQIPSDSNPSLPLNNDPTVFVGQESVPLEGVIQFEKPNATASRLEKWGRVALL 114

Query: 404 XXXXXXXXXXFSAIGRFSHGFPVFDIETLHTADPFIAGWFLSAYFLXXXXXXXXXXXXXX 583
                     FSAIGRFSHGF V D ETL TADPFIAGW LSAYFL              
Sbjct: 115 AGGDVLALILFSAIGRFSHGFSVIDFETLRTADPFIAGWTLSAYFLGGYGDDGRGMNGLS 174

Query: 584 KAVIAAAKSWAVGIPLGVIIRSATSGHIPPVRFMLVTMGATAVLLIGWRALLFTILPNDK 763
           KAV+AAAKSWA+GIPLG+IIR+ATSGHIP   F+LVTMG+T  LLIGWRALLF+I PNDK
Sbjct: 175 KAVLAAAKSWALGIPLGLIIRAATSGHIPSSNFILVTMGSTGFLLIGWRALLFSIFPNDK 234

Query: 764 GKKNDVYRRGSPFELFELLTSLVRRW 841
            KKNDVYRRGSPFELFELLTSLVRRW
Sbjct: 235 SKKNDVYRRGSPFELFELLTSLVRRW 260


>ref|XP_002510050.1| conserved hypothetical protein [Ricinus communis]
           gi|223550751|gb|EEF52237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  250 bits (639), Expect = 4e-64
 Identities = 125/187 (66%), Positives = 141/187 (75%)
 Frame = +2

Query: 281 FNDDETIFVGDERIPLEGVIQFDKPPNFSMQLNKWGRXXXXXXXXXXXXXXFSAIGRFSH 460
           F  DET+FVG E +PLEGVIQF+KP + S +L+KWGR              FSAIGRFSH
Sbjct: 91  FRTDETVFVGQENVPLEGVIQFEKPSS-SSRLDKWGRVALISGGDVLALLLFSAIGRFSH 149

Query: 461 GFPVFDIETLHTADPFIAGWFLSAYFLXXXXXXXXXXXXXXKAVIAAAKSWAVGIPLGVI 640
           G+ VFD ETL TADPF+AGWFL AYFL              KAVIAA KSWAVGIPLG+I
Sbjct: 150 GYSVFDFETLRTADPFVAGWFLGAYFLGGYGEDGRGMNGPSKAVIAAVKSWAVGIPLGLI 209

Query: 641 IRSATSGHIPPVRFMLVTMGATAVLLIGWRALLFTILPNDKGKKNDVYRRGSPFELFELL 820
           IR+ TSGHIPP  F+LVTMG+TAVLL+GWRALL +ILP ++ KKNDVYRRGSPFELFELL
Sbjct: 210 IRAVTSGHIPPYTFVLVTMGSTAVLLVGWRALLSSILPTNESKKNDVYRRGSPFELFELL 269

Query: 821 TSLVRRW 841
           TSLVRRW
Sbjct: 270 TSLVRRW 276


>ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339841|gb|EFH70258.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  244 bits (624), Expect = 2e-62
 Identities = 122/186 (65%), Positives = 138/186 (74%), Gaps = 2/186 (1%)
 Frame = +2

Query: 290 DETIFVGDERIPLEGVIQFDKPPNF--SMQLNKWGRXXXXXXXXXXXXXXFSAIGRFSHG 463
           D+T+FVG E +PLEGVIQFDKP +   S  + KWGR              FSAIGRFSHG
Sbjct: 74  DDTVFVGQENVPLEGVIQFDKPSSSTSSSNITKWGRVALLAGGDVLALLIFSAIGRFSHG 133

Query: 464 FPVFDIETLHTADPFIAGWFLSAYFLXXXXXXXXXXXXXXKAVIAAAKSWAVGIPLGVII 643
           FPVF IETLHTADPFIAGWFLSAYFL              KAV+AAAKSW VG PLG+II
Sbjct: 134 FPVFSIETLHTADPFIAGWFLSAYFLGGYAEEGRGMKGRSKAVVAAAKSWIVGAPLGIII 193

Query: 644 RSATSGHIPPVRFMLVTMGATAVLLIGWRALLFTILPNDKGKKNDVYRRGSPFELFELLT 823
           RSA+SGHIP   F+LVTMG+TAVLLIGWRALLF++LP +  KK+D YR+GS FELFELLT
Sbjct: 194 RSASSGHIPASSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYRKGSAFELFELLT 253

Query: 824 SLVRRW 841
           SL+RRW
Sbjct: 254 SLIRRW 259


>ref|NP_564492.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8656004|gb|AAF78277.1|AC020576_21 Contains similarity
           to hypothetical protein F27F5.3 gi|7767678 from
           Arabidopsis thaliana F27F5 gb|AC007915 and contains a
           terpene synthase PF|01397 domain [Arabidopsis thaliana]
           gi|13878107|gb|AAK44131.1|AF370316_1 unknown protein
           [Arabidopsis thaliana] gi|17104773|gb|AAL34275.1|
           unknown protein [Arabidopsis thaliana]
           gi|332193943|gb|AEE32064.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 258

 Score =  243 bits (621), Expect = 5e-62
 Identities = 120/185 (64%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
 Frame = +2

Query: 290 DETIFVGDERIPLEGVIQFDKPPNFSMQ-LNKWGRXXXXXXXXXXXXXXFSAIGRFSHGF 466
           DET+FVG + +PLEGVIQFDKP + S   + KWGR              FSAIGRFSHGF
Sbjct: 74  DETVFVGQDNVPLEGVIQFDKPSSTSSSNITKWGRVALLAGGDVLALLIFSAIGRFSHGF 133

Query: 467 PVFDIETLHTADPFIAGWFLSAYFLXXXXXXXXXXXXXXKAVIAAAKSWAVGIPLGVIIR 646
           PVF ++TLHTADPFIAGWFLSAYFL              KAV+AAAKSW VG PLG+IIR
Sbjct: 134 PVFSLDTLHTADPFIAGWFLSAYFLGGYAEEGRGMKGKSKAVVAAAKSWIVGTPLGIIIR 193

Query: 647 SATSGHIPPVRFMLVTMGATAVLLIGWRALLFTILPNDKGKKNDVYRRGSPFELFELLTS 826
           SA+SGHIP   F+LVTMG+TAVLLIGWRALLF++LP +  KK+D YR+GS FELFELLTS
Sbjct: 194 SASSGHIPAYSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYRKGSAFELFELLTS 253

Query: 827 LVRRW 841
           L+RRW
Sbjct: 254 LIRRW 258


Top