BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017262
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   474   e-131
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   449   e-124
emb|CBI32139.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   445   e-122
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   425   e-116

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score =  474 bits (1219), Expect = e-131
 Identities = 252/449 (56%), Positives = 317/449 (70%), Gaps = 7/449 (1%)
 Frame = -1

Query: 1879 QQKPDKGRREKGVNTMSGFITKQCRTVLRRAAAADESRTFCNLLGTTSLDLNDNDDEGVL 1700
            Q++PDK R+ K V + S  I KQCRTVLRR A+ D+ + FCNLLG   +D NDNDD+G+L
Sbjct: 871  QRRPDKKRKGKRVRSASDLIMKQCRTVLRRVASTDKEKVFCNLLGRI-MDPNDNDDKGLL 929

Query: 1699 GSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFLEDVREVWHNIHTAYGDRPELIQLAETLS 1520
            G PAMVSRPLDFRTIDLRLAVG YGGS+EAFLEDV+EVWHNI  AY D  + I LAE LS
Sbjct: 930  GFPAMVSRPLDFRTIDLRLAVGAYGGSNEAFLEDVQEVWHNICIAYRDSDD-ISLAEALS 988

Query: 1519 QKFEILYEKEVLTLVNKCKEHANSESLSSVVKKELIEVLNCTNSTPKAPWDEGVCKVCGI 1340
            + FE LY KEVLTLV K   +AN E L++  KKEL + + C +  PKAPWDEG+CKVCG+
Sbjct: 989  KDFESLYSKEVLTLVQKFMSYANVEFLNAEAKKELEDTIACADEIPKAPWDEGLCKVCGV 1048

Query: 1339 DKNDESVLLCDKCDSEYHTYCLIPPLARIPEGNWYCPSCVAGQGKAQDASKRPKVFTRRR 1160
            DK+D++VLLCD CDSEYHTYCL PPLARIPEGNWYCPSCVA Q  +Q  S+  +VF+R R
Sbjct: 1049 DKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSCVAAQRLSQGTSRSAEVFSRCR 1108

Query: 1159 QKRYQGEGSRSFSEAMSRLAVTMGEKEYWEFSVEERIFLLKFLCDEVLNSAIIREHLDQC 980
            +KRYQGE +R++ E ++ LA  M  KEY E S+EER+FLLKF C+EVLNSAIIREHL+QC
Sbjct: 1109 RKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQC 1168

Query: 979  ADMSSDLQQKLRSLAAELRNLKFREENLATRPTKDNLITFDGV-LEAGRDKMTSVLANHG 803
            A +S+DLQQKLR+L+ E RNLK REE LA +  K N +  DGV  EAG + +  +L N+ 
Sbjct: 1169 ASLSADLQQKLRTLSLERRNLKLREEILAVKVEKANSVGLDGVGGEAGTEAVAMMLKNYS 1228

Query: 802  RYIGQRQTLNSKYNYCTPPSGYLLQMQDVLQE------NKHPYMFSSKSIPERHCNGGRT 641
            + +   Q LN    + + PS  L+ ++D  QE      NK PY F++K   E+H    R 
Sbjct: 1229 KLM--VQPLNKSNYFASFPSN-LVSLEDGQQENEQNDFNKPPYWFNAKGFLEKHHATSRD 1285

Query: 640  EYMKVSGVGNENRDKISVTDDSLILENLF 554
              MK     ++ + +    D+S+  EN F
Sbjct: 1286 LSMKTPDTDDQMKYQHLAKDNSVPHENHF 1314



 Score =  102 bits (254), Expect = 4e-19
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = -2

Query: 309  DNLFLGHYSSTQIDFNESEIPNLEANSLKNEISLLMGSIASIESQLLKMSMRREFLGRDS 130
            +N+ L H    Q    ES+  N EA+SLKNEIS+L  SIAS+ESQLLK+SMR+EFLG+DS
Sbjct: 1399 ENMLLDHNGIGQPVAIESQAYNQEADSLKNEISVLQDSIASLESQLLKVSMRKEFLGKDS 1458

Query: 129  AGRLYWVLGRPEKSPWLVVDGSM 61
            AGRLYWV  R   SPW+V+DGSM
Sbjct: 1459 AGRLYWVFSRAGTSPWVVIDGSM 1481


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score =  449 bits (1156), Expect = e-124
 Identities = 225/371 (60%), Positives = 278/371 (74%)
 Frame = -1

Query: 1882 PQQKPDKGRREKGVNTMSGFITKQCRTVLRRAAAADESRTFCNLLGTTSLDLNDNDDEGV 1703
            PQQKP++ R+ K ++T+   I KQCR VLRRAAAADE + FCNLLG T L+ +DNDDEG+
Sbjct: 744  PQQKPNRKRKGKHIDTLPDVIMKQCRKVLRRAAAADEEKIFCNLLGRTLLNTSDNDDEGL 803

Query: 1702 LGSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFLEDVREVWHNIHTAYGDRPELIQLAETL 1523
            LG P MVSRPLDFRTIDLRLA G YGGSHEAFLEDVREVWH+I TAY D+ +L+ LAE L
Sbjct: 804  LGFPTMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVREVWHHIRTAYADQSDLVHLAEKL 863

Query: 1522 SQKFEILYEKEVLTLVNKCKEHANSESLSSVVKKELIEVLNCTNSTPKAPWDEGVCKVCG 1343
            SQ FE LY+ EVLTLV K  ++A  E  +S  KKE+ ++L   +  PKAPWDEGVCKVCG
Sbjct: 864  SQNFEALYKNEVLTLVQKLTDYAAVECSNSEAKKEMEDILEHASQMPKAPWDEGVCKVCG 923

Query: 1342 IDKNDESVLLCDKCDSEYHTYCLIPPLARIPEGNWYCPSCVAGQGKAQDASKRPKVFTRR 1163
            +DK+D++VLLCDKCDS YHTYCL PPLARIPEGNWYCPSC+      Q AS+ P+  +  
Sbjct: 924  VDKDDDNVLLCDKCDSGYHTYCLNPPLARIPEGNWYCPSCI-----TQGASQVPQFVSHC 978

Query: 1162 RQKRYQGEGSRSFSEAMSRLAVTMGEKEYWEFSVEERIFLLKFLCDEVLNSAIIREHLDQ 983
            R+KR QGE +    EA++ L  TM   +YW++SVEERIFLLKFL DEVLNSA IREHLDQ
Sbjct: 979  RKKRRQGEFTHGVLEALAHLGTTMEITDYWDYSVEERIFLLKFLGDEVLNSANIREHLDQ 1038

Query: 982  CADMSSDLQQKLRSLAAELRNLKFREENLATRPTKDNLITFDGVLEAGRDKMTSVLANHG 803
            CA +S+DLQQKLRSL+ E RNLKF+EE           +  +GV ++G++  T+VL N+ 
Sbjct: 1039 CASVSADLQQKLRSLSMEWRNLKFKEE-----------LMLNGVGKSGKEGTTTVLPNYD 1087

Query: 802  RYIGQRQTLNS 770
            + +GQ  + +S
Sbjct: 1088 KLLGQTHSRSS 1098



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 40/92 (43%), Positives = 59/92 (64%)
 Frame = -2

Query: 276  QIDFNESEIPNLEANSLKNEISLLMGSIASIESQLLKMSMRREFLGRDSAGRLYWVLGRP 97
            Q D N+ +  NLE+  ++++ S+L  S+ S+E QL K S+R+EFLGRDSAGR+YW   R 
Sbjct: 1158 QPDVNQLQTSNLESIFIRDKASVLQDSVTSLELQLQKASLRKEFLGRDSAGRVYWAFSRT 1217

Query: 96   EKSPWLVVDGSMPVQQKTSENGGKDLFVENLS 1
               PW+V+DG+  VQQ +     + L   NL+
Sbjct: 1218 GSLPWVVIDGTTVVQQSSIAEENRVLRFNNLT 1249


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  447 bits (1149), Expect = e-123
 Identities = 236/424 (55%), Positives = 292/424 (68%), Gaps = 9/424 (2%)
 Frame = -1

Query: 1879 QQKPDKGRREKGVNTMSGFITKQCRTVLRRAAAADESRTFCNLLGTTSLDLNDNDDEGVL 1700
            Q++PDK R+ K V + S  I KQCRTVLRR A+ D+ + FCNLLG   +D NDNDD+G+L
Sbjct: 768  QRRPDKKRKGKRVRSASDLIMKQCRTVLRRVASTDKEKVFCNLLGRI-MDPNDNDDKGLL 826

Query: 1699 GSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFLEDVREVWHNIHTAYGDRPELIQLAETLS 1520
            G PAMVSRPLDFRTIDLRLAVG YGGS+EAFLEDV+EVWHNI  AY D  + I LAE LS
Sbjct: 827  GFPAMVSRPLDFRTIDLRLAVGAYGGSNEAFLEDVQEVWHNICIAYRDSDD-ISLAEALS 885

Query: 1519 QKFEILYEKEVLTLVNKCKEHANSESLSSVVKKELIEVLNCTNSTPKAPWDEGVCKVCGI 1340
            + FE LY KEVLTLV K   +AN E L++  KKEL + + C +  PKAPWDEG+CKVCG+
Sbjct: 886  KDFESLYSKEVLTLVQKFMSYANVEFLNAEAKKELEDTIACADEIPKAPWDEGLCKVCGV 945

Query: 1339 DKNDESVLLCDKCDSEYHTYCLIPPLARIPEGNWYCPSCVAGQGKAQDASKRPKVFTRRR 1160
            DK+D++VLLCD CDSEYHTYCL PPLARIPEGNWYCPSCVA Q  +Q  S+  +VF+R R
Sbjct: 946  DKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSCVAAQRLSQGTSRSAEVFSRCR 1005

Query: 1159 QKRYQGEGSRSFSEAMSRLAVTMGEKEYWEFSVEERIFLLKFLCDEVLNSAIIREHLDQC 980
            +KRYQGE +R++ E ++ LA  M  KEY E S+EER+FLLKF C+EVLNSAIIREHL+QC
Sbjct: 1006 RKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQC 1065

Query: 979  ADMSSDLQQKLRSLAAELRNLKFREENLATRPTKDNLITFDGVLEAGRDKMTSVLANHGR 800
            A +S+DLQQKLR+L+ E RNLK REE LA +  K N +  DG L       +        
Sbjct: 1066 ASLSADLQQKLRTLSLERRNLKLREEILAVKVEKANSVGLDGPLNKSNYFASFPSNLVSL 1125

Query: 799  YIGQRQTLNSKYN---YCTPPSGY-----LLQMQDVLQENKHP-YMFSSKSIPERHCNGG 647
              GQ++   + +N   YC P   +       +  D    NK P +   S+ I     N  
Sbjct: 1126 EDGQQENEQNDFNKPPYCVPHENHFSSTPFFRKDDFSSLNKLPLFTPQSQKINSGEGNDS 1185

Query: 646  RTEY 635
            R+ +
Sbjct: 1186 RSNF 1189



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = -2

Query: 309  DNLFLGHYSSTQIDFNESEIPNLEANSLKNEISLLMGSIASIESQLLKMSMRREFLGRDS 130
            +N+ L H    Q    ES+  N EA+SLKNEIS+L  SIAS+ESQLLK+SMR+EFLG+DS
Sbjct: 1235 ENMLLDHNGIGQPVAIESQAYNQEADSLKNEISVLQDSIASLESQLLKVSMRKEFLGKDS 1294

Query: 129  AGRLYWVLGRPEKSPWLVVDG 67
            AGRLYWV  R   SPW+V+DG
Sbjct: 1295 AGRLYWVFSRAGTSPWVVIDG 1315


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  445 bits (1145), Expect = e-122
 Identities = 230/452 (50%), Positives = 307/452 (67%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1879 QQKPDKGRREKGVNTMSGFITKQCRTVLRRAAAADESRTFCNLLGTTSLDLNDNDDEGVL 1700
            + KPDK R+ K V ++   I KQCR  LRR AAAD+++ FC LLG+  ++  DNDDEG+L
Sbjct: 1047 KSKPDKERKRKRVISIPDIIMKQCRITLRRGAAADDAKVFCTLLGSKLINSIDNDDEGLL 1106

Query: 1699 GSPAMVSRPLDFRTIDLRLAVGYYGGSHEAFLEDVREVWHNIHTAYGDRPELIQLAETLS 1520
            G+PAMVSRPLDFRTIDLRLAVG YGGS E FLEDVRE+W+NIHTAY D+P+ ++LA TLS
Sbjct: 1107 GTPAMVSRPLDFRTIDLRLAVGAYGGSWETFLEDVRELWNNIHTAYADQPDSVELARTLS 1166

Query: 1519 QKFEILYEKEVLTLVNKCKEHANSESLSSVVKKELIEVLNCTNSTPKAPWDEGVCKVCGI 1340
            Q FE ++EKEVL LV K  E+A SE LS+  +KE+ + L   +  PKAPWDEGVCKVCGI
Sbjct: 1167 QNFESMFEKEVLPLVQKFTEYAKSECLSAETEKEIDDFLVSASEIPKAPWDEGVCKVCGI 1226

Query: 1339 DKNDESVLLCDKCDSEYHTYCLIPPLARIPEGNWYCPSCVAGQGKAQDASKRPKVFTRRR 1160
            DK+D+SVLLCD CD+EYHTYCL PPLARIPEGNWYCPSCVAG     D S+   V  +R+
Sbjct: 1227 DKDDDSVLLCDMCDAEYHTYCLNPPLARIPEGNWYCPSCVAGISMV-DVSEHTHVIAQRQ 1285

Query: 1159 QKRYQGEGSRSFSEAMSRLAVTMGEKEYWEFSVEERIFLLKFLCDEVLNSAIIREHLDQC 980
             K  QG+ + ++ E+++ LA  M EKEYWE SV++R FL KFLCDE+LN+A+IR+HL+QC
Sbjct: 1286 GKNCQGDFTHAYLESLAHLAAAMEEKEYWELSVDQRTFLFKFLCDELLNTALIRQHLEQC 1345

Query: 979  ADMSSDLQQKLRSLAAELRNLKFREENLATR-PTKDNLITFDGVLEAGRDKMTSVLANHG 803
            A+ S++LQQKLRS++ E +NLK +EENLA R P  D+ + +          ++S L N+G
Sbjct: 1346 AESSAELQQKLRSISVEWKNLKLKEENLAARAPKVDSGMIYVAGEVGTEGGLSSALTNNG 1405

Query: 802  RYIGQRQTLNSKYNYCTPPSGYLLQMQDVLQ-----ENKHPYMFSSKSIPERHCNGGRTE 638
            + I +  TL+ +      P  + +   D LQ     E   P        P  +C+ G   
Sbjct: 1406 KCIAKPHTLSDR------PKDFGILSNDQLQVEGGSEGIRPNGLDKH--PSSNCSEGNCT 1457

Query: 637  YMKVSGVGNENRDKISVTDDSLILENLFPHAI 542
               +   G + ++  +V D++ +  + FPH +
Sbjct: 1458 LKPIDNEG-QLKEVHAVVDETQVSVDHFPHMV 1488



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = -2

Query: 240  EANSLKNEISLLMGSIASIESQLLKMSMRREFLGRDSAGRLYWVLGRPEKSPWLVVDGSM 61
            E NS+KN+IS L  S+ASIESQLLK+S+RREFLG DSAGRLYW+L +P   PW++VDGSM
Sbjct: 1553 ELNSIKNDISDLQDSMASIESQLLKLSVRREFLGSDSAGRLYWILAKPGWHPWVLVDGSM 1612

Query: 60   PVQQK 46
             +Q+K
Sbjct: 1613 ALQKK 1617


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  425 bits (1093), Expect = e-116
 Identities = 211/378 (55%), Positives = 274/378 (72%)
 Frame = -1

Query: 1876 QKPDKGRREKGVNTMSGFITKQCRTVLRRAAAADESRTFCNLLGTTSLDLNDNDDEGVLG 1697
            QK +   + K    +S  I KQCR +LR AAAAD+++ FC LLG   ++  D+DDEG+LG
Sbjct: 1050 QKSNNRNKRKITVPVSDIIMKQCRIILRHAAAADDAKVFCTLLGRNLINSCDHDDEGLLG 1109

Query: 1696 SPAMVSRPLDFRTIDLRLAVGYYGGSHEAFLEDVREVWHNIHTAYGDRPELIQLAETLSQ 1517
             PAMVSRPLDFRTIDLRLAVG YGGSHE+FLEDVRE+W+N+ TA+ D+P++I+L ETL+Q
Sbjct: 1110 YPAMVSRPLDFRTIDLRLAVGAYGGSHESFLEDVRELWNNVRTAFRDQPDVIELVETLAQ 1169

Query: 1516 KFEILYEKEVLTLVNKCKEHANSESLSSVVKKELIEVLNCTNSTPKAPWDEGVCKVCGID 1337
             FE LYEKEV+TLV K +E A  + LS+  KK+L  VL  TN  PKAPWDEGVCKVCG D
Sbjct: 1170 NFESLYEKEVVTLVQKFEEFAKLDRLSAETKKDLDIVLASTNEIPKAPWDEGVCKVCGFD 1229

Query: 1336 KNDESVLLCDKCDSEYHTYCLIPPLARIPEGNWYCPSCVAGQGKAQDASKRPKVFTRRRQ 1157
            K+D+SVLLCD CD+EYHTYCL PPLARIPEGNWYCPSCV+ +   Q+AS   +V  +   
Sbjct: 1230 KDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVSVR-MVQEASVSTQVIGQNSC 1288

Query: 1156 KRYQGEGSRSFSEAMSRLAVTMGEKEYWEFSVEERIFLLKFLCDEVLNSAIIREHLDQCA 977
            K+YQGE +R + E +  LA  M EK+YW+F V+ER FLLKFLCDE+LNSA++R+HL+QC 
Sbjct: 1289 KKYQGEMTRIYLETLVHLASAMEEKDYWDFGVDERTFLLKFLCDELLNSALVRQHLEQCM 1348

Query: 976  DMSSDLQQKLRSLAAELRNLKFREENLATRPTKDNLITFDGVLEAGRDKMTSVLANHGRY 797
            + ++++QQKLR+L AE +NLK +EE +A +  K       G     ++ + S L + G+ 
Sbjct: 1349 ESTAEVQQKLRTLYAEWKNLKSKEEFMALKSAKMG----TGASGEVKEGLVSALKDQGKS 1404

Query: 796  IGQRQTLNSKYNYCTPPS 743
            +GQ   L  K + C  PS
Sbjct: 1405 VGQPPVLGDKPSDCCAPS 1422



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 273  IDFNESEIPNLEANSLKNEISLLMGSIASIESQLLKMSMRREFLGRDSAGRLYWVLGRPE 94
            +  NES+  + + +++K++I  L   I+S+ESQL K S+RREFLG DS G LYW    P 
Sbjct: 1514 VTMNESQAYHTDVSAIKDDILRLQNLISSMESQLSKQSLRREFLGSDSRGHLYWASATPN 1573

Query: 93   KSPWLVVDGSMPVQQK 46
              P +VVD S+  Q +
Sbjct: 1574 GHPQIVVDRSLTFQHR 1589