BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017258
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795...    63   2e-08
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...    63   3e-08
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...    62   4e-08
ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...    61   8e-08

>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
          Length = 206

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/82 (37%), Positives = 42/82 (51%)
 Frame = -2

Query: 458 PGHVTGPMMPSMVAPPGSTPLPMQFNGLXXXXXXXXXXXXXXXXXTSASNGASSMMTPAV 279
           PG+V+ P MP M+ PPG+   P Q N +                   ASNGA SM++ A+
Sbjct: 120 PGYVSAPTMPPMLPPPGAPQAPGQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMVSSAM 179

Query: 278 YQGNPRASVGGVFDNYNTNTSS 213
           YQ NP A   G +DNYN +  +
Sbjct: 180 YQANPPAPSSGSYDNYNASAQA 201


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/82 (37%), Positives = 41/82 (50%)
 Frame = -2

Query: 473 PISTVPGHVTGPMMPSMVAPPGSTPLPMQFNGLXXXXXXXXXXXXXXXXXTSASNGASSM 294
           P+   PG+++ P MP MVAPPG+  LP Q NGL                  +  +GA SM
Sbjct: 116 PVPAAPGYMSSPAMPPMVAPPGAPSLPGQVNGLPRPPMSIPPATVPGSAAVAPPSGAPSM 175

Query: 293 MTPAVYQGNPRASVGGVFDNYN 228
           + PA YQ NP       FD++N
Sbjct: 176 VPPASYQTNPAPPTSAGFDSFN 197


>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/82 (39%), Positives = 44/82 (53%)
 Frame = -2

Query: 458 PGHVTGPMMPSMVAPPGSTPLPMQFNGLXXXXXXXXXXXXXXXXXTSASNGASSMMTPAV 279
           PG+V+   MP M+ PPG+  +P Q N +                 T ASNGA SM++ A+
Sbjct: 120 PGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAM 179

Query: 278 YQGNPRASVGGVFDNYNTNTSS 213
           YQ NP A   G +DNYNT+  +
Sbjct: 180 YQANPPAPSSGSYDNYNTSAQA 201


>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 42/87 (48%)
 Frame = -2

Query: 473 PISTVPGHVTGPMMPSMVAPPGSTPLPMQFNGLXXXXXXXXXXXXXXXXXTSASNGASSM 294
           P+   PG++  PMMP M+APPG+  LP Q NG+                     +G  SM
Sbjct: 111 PMPGAPGYMNPPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSM 170

Query: 293 MTPAVYQGNPRASVGGVFDNYNTNTSS 213
             P  YQ N  A+  G FD++N N ++
Sbjct: 171 GPPVTYQANQAATTSGGFDSFNVNAAA 197


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = -2

Query: 473 PISTVPGHVTGPMMPSMVAPPGSTPLPM-QFNGLXXXXXXXXXXXXXXXXXTSASNGASS 297
           P+   PG++  P MPSM+APPG+  +PM   N L                 T  S GA S
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPS 180

Query: 296 MMTPAVYQGNPRASVGGVFDNYNTN 222
           MMT  +YQ NP     G FD++N N
Sbjct: 181 MMTQPMYQANPAGPTSGGFDSFNIN 205