BLASTX nr result

ID: Cimicifuga21_contig00017246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017246
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22668.3| unnamed protein product [Vitis vinifera]               94   5e-17
emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]    94   5e-17
ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein ...    94   8e-17
ref|XP_003589419.1| Membrane protein, putative [Medicago truncat...    93   1e-16
ref|XP_002333059.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-16

>emb|CBI22668.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM*IRATL 909
            ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M +    
Sbjct: 389  ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHMSLSGHR 448

Query: 908  QKS*MFL 888
            +K  ++L
Sbjct: 449  RKLELYL 455


>emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]
          Length = 1230

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM*IRATL 909
            ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M +    
Sbjct: 441  ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHMSLSGHR 500

Query: 908  QKS*MFL 888
            +K  ++L
Sbjct: 501  RKLELYL 507


>ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein yjcL [Vitis vinifera]
          Length = 494

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -3

Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM 927
            ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M
Sbjct: 441  ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHM 494


>ref|XP_003589419.1| Membrane protein, putative [Medicago truncatula]
            gi|357473043|ref|XP_003606806.1| Membrane protein,
            putative [Medicago truncatula]
            gi|355478467|gb|AES59670.1| Membrane protein, putative
            [Medicago truncatula] gi|355507861|gb|AES89003.1|
            Membrane protein, putative [Medicago truncatula]
          Length = 495

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = -3

Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM 927
            ASNANIGGPTTACGM   KGW S +VP ILTGIFG+SI TFLGIGFGLMVLK++
Sbjct: 442  ASNANIGGPTTACGMAKAKGWESLVVPGILTGIFGVSIATFLGIGFGLMVLKHL 495


>ref|XP_002333059.1| predicted protein [Populus trichocarpa] gi|222834146|gb|EEE72623.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = -3

Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLK 933
            ASNANIGGPTTACGM T KGW S +VP IL GIFG+SI TFLGIGFG+MVLK
Sbjct: 332  ASNANIGGPTTACGMATAKGWDSLVVPGILAGIFGVSIATFLGIGFGMMVLK 383


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