BLASTX nr result
ID: Cimicifuga21_contig00017246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00017246 (1150 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22668.3| unnamed protein product [Vitis vinifera] 94 5e-17 emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera] 94 5e-17 ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein ... 94 8e-17 ref|XP_003589419.1| Membrane protein, putative [Medicago truncat... 93 1e-16 ref|XP_002333059.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-16 >emb|CBI22668.3| unnamed protein product [Vitis vinifera] Length = 1178 Score = 94.4 bits (233), Expect = 5e-17 Identities = 45/67 (67%), Positives = 54/67 (80%) Frame = -3 Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM*IRATL 909 ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M + Sbjct: 389 ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHMSLSGHR 448 Query: 908 QKS*MFL 888 +K ++L Sbjct: 449 RKLELYL 455 >emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera] Length = 1230 Score = 94.4 bits (233), Expect = 5e-17 Identities = 45/67 (67%), Positives = 54/67 (80%) Frame = -3 Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM*IRATL 909 ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M + Sbjct: 441 ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHMSLSGHR 500 Query: 908 QKS*MFL 888 +K ++L Sbjct: 501 RKLELYL 507 >ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein yjcL [Vitis vinifera] Length = 494 Score = 93.6 bits (231), Expect = 8e-17 Identities = 43/54 (79%), Positives = 48/54 (88%) Frame = -3 Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM 927 ASNANIGGPTTACGM T KGW+S +VP IL GIFGISI TFLGIGFG+MVL++M Sbjct: 441 ASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHM 494 >ref|XP_003589419.1| Membrane protein, putative [Medicago truncatula] gi|357473043|ref|XP_003606806.1| Membrane protein, putative [Medicago truncatula] gi|355478467|gb|AES59670.1| Membrane protein, putative [Medicago truncatula] gi|355507861|gb|AES89003.1| Membrane protein, putative [Medicago truncatula] Length = 495 Score = 93.2 bits (230), Expect = 1e-16 Identities = 43/54 (79%), Positives = 47/54 (87%) Frame = -3 Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLKNM 927 ASNANIGGPTTACGM KGW S +VP ILTGIFG+SI TFLGIGFGLMVLK++ Sbjct: 442 ASNANIGGPTTACGMAKAKGWESLVVPGILTGIFGVSIATFLGIGFGLMVLKHL 495 >ref|XP_002333059.1| predicted protein [Populus trichocarpa] gi|222834146|gb|EEE72623.1| predicted protein [Populus trichocarpa] Length = 385 Score = 91.7 bits (226), Expect = 3e-16 Identities = 42/52 (80%), Positives = 45/52 (86%) Frame = -3 Query: 1088 ASNANIGGPTTACGMDTTKGWTSTIVPAILTGIFGISITTFLGIGFGLMVLK 933 ASNANIGGPTTACGM T KGW S +VP IL GIFG+SI TFLGIGFG+MVLK Sbjct: 332 ASNANIGGPTTACGMATAKGWDSLVVPGILAGIFGVSIATFLGIGFGMMVLK 383