BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017199
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   195   8e-48
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   164   3e-38
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   162   6e-38
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             161   1e-37
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             161   1e-37

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 642

 Score =  195 bits (496), Expect = 8e-48
 Identities = 97/251 (38%), Positives = 146/251 (58%)
 Frame = -1

Query: 765  KQGDPLSPLLFAIVEDTISLGINWLRDSNKIKPMSIQKGILAPSHLLFADDMIIFINGDI 586
            +QGDPLSPLLF IVE+ +S  I+ L D   I  ++  +    P H  + DD+++F    +
Sbjct: 381  RQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFHCFYVDDLMVFCKAKM 440

Query: 585  KGLKALMNMILIYQNSSGQKININKCKIFLGGMKRDRKSKIRDIFKIPIGNLPEKYLGIP 406
              L  L ++   Y + SGQ +NI K  IF GG+   R + I +I    +G+LP  YLG P
Sbjct: 441  SSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGITDTRMNNIVNILGFNVGSLPFTYLGAP 500

Query: 405  LIKGRVTKPGVTKILDNIKSSITGWASKMLSFQGRIILIKSVLASYPIYNMAIYRWPNGT 226
            + KG+        I D +K+ +  W + +LS  GRI L+KSV+ S  ++ M+IY WP   
Sbjct: 501  IFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYSWPIKI 560

Query: 225  IREAEKMIKNFLWTGDHEKTKCITKAWDKVCKPLSEGGLGISRLGEVNKALLMKLAWNIL 46
            ++E EK IKNF+W+GD  K K +T AW K+C    EGGLG+  L  +N+A  +K+ WN++
Sbjct: 561  LKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEGGLGVKSLICLNEATNLKICWNLM 620

Query: 45   TNKDNFGEYIR 13
             + + +   IR
Sbjct: 621  QSDEQWANIIR 631


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  164 bits (414), Expect = 3e-38
 Identities = 89/247 (36%), Positives = 141/247 (57%), Gaps = 2/247 (0%)
 Frame = -1

Query: 765  KQGDPLSPLLFAIVEDTISLGINWLRDSNKIK--PMSIQKGILAPSHLLFADDMIIFING 592
            +QG  LSP L+ I  + +S  ++      KI   P      +   +HL FADD+++F +G
Sbjct: 804  RQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNL---THLCFADDIMVFSDG 860

Query: 591  DIKGLKALMNMILIYQNSSGQKININKCKIFLGGMKRDRKSKIRDIFKIPIGNLPEKYLG 412
              K ++  + +   +   S  KI++ K  IF+ G+  + K+ I   F   +G LP KYLG
Sbjct: 861  TSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLG 920

Query: 411  IPLIKGRVTKPGVTKILDNIKSSITGWASKMLSFQGRIILIKSVLASYPIYNMAIYRWPN 232
            +PL+  R+T+     +++ I++ IT W ++ LSF GR+ LIKSVL+S   + ++++R P 
Sbjct: 921  LPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPK 980

Query: 231  GTIREAEKMIKNFLWTGDHEKTKCITKAWDKVCKPLSEGGLGISRLGEVNKALLMKLAWN 52
              ++E EKM   FLW+G    TK    AW +VCK   EGGLG+  L E N+  L+KL W 
Sbjct: 981  ACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWR 1040

Query: 51   ILTNKDN 31
            IL+ +D+
Sbjct: 1041 ILSARDS 1047


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  162 bits (411), Expect = 6e-38
 Identities = 87/245 (35%), Positives = 138/245 (56%)
 Frame = -1

Query: 765  KQGDPLSPLLFAIVEDTISLGINWLRDSNKIKPMSIQKGILAPSHLLFADDMIIFINGDI 586
            +QGDP+SP+LF I+ + +   +  ++ +      S  + I   ++L FADD+++F  GD 
Sbjct: 966  RQGDPMSPMLFVIIMEYLHRTLVKMQQNPDFNHHSKCEKI-GLTNLTFADDVLLFCRGDS 1024

Query: 585  KGLKALMNMILIYQNSSGQKININKCKIFLGGMKRDRKSKIRDIFKIPIGNLPEKYLGIP 406
            K +  +M  I  + +S+G K+N  KC++F GGM    K  +R I     G LP +YLG+P
Sbjct: 1025 KSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGVP 1084

Query: 405  LIKGRVTKPGVTKILDNIKSSITGWASKMLSFQGRIILIKSVLASYPIYNMAIYRWPNGT 226
            L   R+T      ++D I   +  W SK+LS+ GRI L+KS+ ++  +Y M  +  P   
Sbjct: 1085 LSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSYAGRIQLVKSITSAIAMYWMQCFPLPQFV 1144

Query: 225  IREAEKMIKNFLWTGDHEKTKCITKAWDKVCKPLSEGGLGISRLGEVNKALLMKLAWNIL 46
            +R+   + ++F+WTG  E +K    AWD +C+  S+GG+GI  L   N   LMK  WNI 
Sbjct: 1145 LRKINAICRSFVWTGKQEISKKSLVAWDTMCRNKSQGGVGIINLQVWNIVSLMKCLWNIC 1204

Query: 45   TNKDN 31
             N +N
Sbjct: 1205 RNSEN 1209


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  161 bits (408), Expect = 1e-37
 Identities = 83/257 (32%), Positives = 143/257 (55%), Gaps = 2/257 (0%)
 Frame = -1

Query: 765  KQGDPLSPLLFAIVEDTISLGINWLRDSNKIKPMSIQKGILAPSHLLFADDMIIFINGDI 586
            +QGDPL+P LF +V + ++  I    ++   KP+ I +G    SHL FADD+++F     
Sbjct: 638  RQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASE 697

Query: 585  KGLKALMNMILIYQNSSGQKININKCKIFLGG-MKRDRKSKIRDIFKIPIGNLPEKYLGI 409
               + + + +  + N+SG K+N +K  +F    +    K  I  I ++P+      YLGI
Sbjct: 698  HQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGI 757

Query: 408  PLIKGRVTKPGVTKILDNIKSSITGWASKMLSFQGRIILIKSVLASYPIYNMAIYRWPNG 229
            P++K RV++     ++D +++ ++ W +  L+  GR +L+++ LA+ P Y M +   P  
Sbjct: 758  PMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVS 817

Query: 228  TIREAEKMIKNFLWTGDHEKTKCITKAWDKVCKPLSEGGLGISRLGEVNKALLMKLAWNI 49
            T  E +K  +NFLW  D    K  +  W ++CKP +EGGLG+    + N+A L K+AW I
Sbjct: 818  TCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQI 877

Query: 48   LTNKDN-FGEYIRAKYL 1
             +N D  + + +R KY+
Sbjct: 878  FSNIDKLWVKVLREKYV 894


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  161 bits (408), Expect = 1e-37
 Identities = 83/257 (32%), Positives = 143/257 (55%), Gaps = 2/257 (0%)
 Frame = -1

Query: 765  KQGDPLSPLLFAIVEDTISLGINWLRDSNKIKPMSIQKGILAPSHLLFADDMIIFINGDI 586
            +QGDPL+P LF +V + ++  I    ++   KP+ I +G    SHL FADD+++F     
Sbjct: 638  RQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASE 697

Query: 585  KGLKALMNMILIYQNSSGQKININKCKIFLGG-MKRDRKSKIRDIFKIPIGNLPEKYLGI 409
               + + + +  + N+SG K+N +K  +F    +    K  I  I ++P+      YLGI
Sbjct: 698  HQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGI 757

Query: 408  PLIKGRVTKPGVTKILDNIKSSITGWASKMLSFQGRIILIKSVLASYPIYNMAIYRWPNG 229
            P++K RV++     ++D +++ ++ W +  L+  GR +L+++ LA+ P Y M +   P  
Sbjct: 758  PMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVS 817

Query: 228  TIREAEKMIKNFLWTGDHEKTKCITKAWDKVCKPLSEGGLGISRLGEVNKALLMKLAWNI 49
            T  E +K  +NFLW  D    K  +  W ++CKP +EGGLG+    + N+A L K+AW I
Sbjct: 818  TCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQI 877

Query: 48   LTNKDN-FGEYIRAKYL 1
             +N D  + + +R KY+
Sbjct: 878  FSNIDKLWVKVLREKYV 894