BLASTX nr result

ID: Cimicifuga21_contig00017194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017194
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20426.3| unnamed protein product [Vitis vinifera]              274   9e-72
ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|2...   268   7e-70
emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera]   267   2e-69
ref|XP_002330372.1| predicted protein [Populus trichocarpa] gi|2...   266   3e-69
emb|CBI20438.3| unnamed protein product [Vitis vinifera]              264   1e-68

>emb|CBI20426.3| unnamed protein product [Vitis vinifera]
          Length = 1901

 Score =  274 bits (701), Expect = 9e-72
 Identities = 121/219 (55%), Positives = 158/219 (72%)
 Frame = +1

Query: 1    NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
            NG+RFSG P+LKPN+I+T+  + N +EIYY Y+L+N SV+ R+VL   S    LQ  TW+
Sbjct: 1276 NGLRFSGMPNLKPNSIYTFHFVLNQKEIYYTYELINSSVVTRMVL---SPNGVLQDYTWI 1332

Query: 181  EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
            ++   W L +T   D CD Y LCGAYG CD+ N   C CLKGF PK P +W+  DWS GC
Sbjct: 1333 DRRQGWLLYLTAQMDNCDRYALCGAYGSCDINNSPACGCLKGFVPKHPNDWNVADWSGGC 1392

Query: 361  QRETFVNCSNGEGFRKYTGV*LPDTTGSWVNTSMNLEECRVKCLRNCSCMAYTNSDIRGG 540
             R T +NC NG+GF KY GV LPDT  SW N +MNL+EC++KCL+NC+C AY NSDIR G
Sbjct: 1393 VRRTRLNCQNGDGFLKYPGVKLPDTQDSWFNMTMNLKECKMKCLKNCNCTAYANSDIRNG 1452

Query: 541  GSGCIMWFSDLIDIKQLVDVGQDIYIRMASSELDSKANS 657
            GSGC++WF +LIDI++  + GQD+Y+RMA+SEL+   +S
Sbjct: 1453 GSGCVLWFGNLIDIREYNENGQDLYVRMAASELEEYESS 1491



 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/139 (38%), Positives = 79/139 (56%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NG+RFSG   L   +I+ +    N +E+YY Y+L++ SV+ R+VL    +   +Q  TW 
Sbjct: 215 NGLRFSGFRALAGKSIYKHVFTFNEKEMYYTYELLDSSVVSRLVLNSNGD---VQRLTWT 271

Query: 181 EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
           + +  W    T+P D CD Y  CG +G C++  V  C CL GF+P  P  W+   WS GC
Sbjct: 272 DVTG-WTEYSTMPMDDCDGYAFCGVHGFCNINQVPKCGCLDGFQPNFPNNWEMGVWSNGC 330

Query: 361 QRETFVNCSNGEGFRKYTG 417
            R   ++C  GE F+KY+G
Sbjct: 331 FRSRPLDCQRGEWFKKYSG 349



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 30/73 (41%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NG+RFSG P L+PN I+ Y  I N +EI+Y Y+L+N SV+ R+VL   ++  + Q  TW+
Sbjct: 735 NGLRFSGFPALRPNPIYKYAFIFNDKEIFYTYELINSSVVSRLVL---NSNGYAQRLTWI 791

Query: 181 EKSNSWGLLVTIP 219
           ++++ W +  ++P
Sbjct: 792 DQTHGWIIFSSVP 804


>ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score =  268 bits (685), Expect = 7e-70
 Identities = 120/219 (54%), Positives = 158/219 (72%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NG+RFSG  +LKPN I+T+E + N EEIYY+YQ+ N SV+ R+VL   S +  LQ  TW+
Sbjct: 221 NGLRFSGMINLKPNPIYTFEFVFNQEEIYYKYQIANSSVLSRMVL---SPDGVLQRFTWI 277

Query: 181 EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
           +++  W L +T   D CD + LCGA+G+C++ N   C CLK F+PKS +EW A DWSQGC
Sbjct: 278 DRTQDWTLYLTANMDNCDRFALCGAHGVCNINNSPACDCLKEFEPKSLEEWTAADWSQGC 337

Query: 361 QRETFVNCSNGEGFRKYTGV*LPDTTGSWVNTSMNLEECRVKCLRNCSCMAYTNSDIRGG 540
            R+  ++CSNGEGF KYTG+ +PDT  SW N ++NLEEC   CL+NCSC AY N D+R G
Sbjct: 338 VRKAPLDCSNGEGFIKYTGIKVPDTRKSWYNKTINLEECEEVCLKNCSCTAYANLDVRDG 397

Query: 541 GSGCIMWFSDLIDIKQLVDVGQDIYIRMASSELDSKANS 657
           GSGC++WF DLIDI+Q  + GQDIYIR+A+S +D    S
Sbjct: 398 GSGCVLWFGDLIDIRQYNENGQDIYIRIAASVIDKPVKS 436


>emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera]
          Length = 818

 Score =  267 bits (682), Expect = 2e-69
 Identities = 117/215 (54%), Positives = 151/215 (70%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NGIRF+G P+L+PN +F Y  + N +E+Y+ Y+LVN SV+ R+VL    N   +Q   W+
Sbjct: 215 NGIRFNGFPELRPNPVFNYSFVFNEKEMYFTYKLVNSSVLSRLVLNPNGN---VQRLIWI 271

Query: 181 EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
            ++ SW +  T  +D CD Y LCGAY  C++     C C+KGF PK P +WD  DWS GC
Sbjct: 272 GRTKSWNVYSTAYKDDCDSYALCGAYSTCNIHRSPRCGCMKGFVPKFPYQWDTMDWSNGC 331

Query: 361 QRETFVNCSNGEGFRKYTGV*LPDTTGSWVNTSMNLEECRVKCLRNCSCMAYTNSDIRGG 540
            R+T ++C  G+GF KY+GV LPDT  SW N SMNL+EC   C RNCSC AYTNSDI+GG
Sbjct: 332 VRKTSLDCQKGDGFAKYSGVKLPDTRNSWFNESMNLKECASLCFRNCSCSAYTNSDIKGG 391

Query: 541 GSGCIMWFSDLIDIKQLVDVGQDIYIRMASSELDS 645
           GSGC++WF DLIDIK+  + GQD YIRMA+SELD+
Sbjct: 392 GSGCLLWFGDLIDIKEFTENGQDFYIRMAASELDA 426


>ref|XP_002330372.1| predicted protein [Populus trichocarpa] gi|222871757|gb|EEF08888.1|
           predicted protein [Populus trichocarpa]
          Length = 776

 Score =  266 bits (680), Expect = 3e-69
 Identities = 119/213 (55%), Positives = 156/213 (73%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NG+RFSG P L+PN ++ +E + N +EIYYRYQL+N S++ R+VLTQ  N    Q  TW 
Sbjct: 218 NGLRFSGVPQLRPNTLYKFEFVFNEKEIYYRYQLLNNSILSRLVLTQNGN---FQRFTWT 274

Query: 181 EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
           ++++ W   + +  D C  Y LCGAYG CD+ +  +C CLKGF PK P+ WD  DWS GC
Sbjct: 275 DQTDVWAFYLALFDDYCSRYALCGAYGTCDITSSPVCGCLKGFLPKVPKVWDMMDWSDGC 334

Query: 361 QRETFVNCSNGEGFRKYTGV*LPDTTGSWVNTSMNLEECRVKCLRNCSCMAYTNSDIRGG 540
            R T +NCS G+GF+KY+GV LPD   SW+N +MNLEEC+  C++NCSC AY N DIR G
Sbjct: 335 ARRTALNCS-GDGFQKYSGVKLPDIRKSWLNKNMNLEECKSMCMKNCSCTAYANLDIREG 393

Query: 541 GSGCIMWFSDLIDIKQLVDVGQDIYIRMASSEL 639
           GSGC++WFS+LID++QL + GQDIYIRMA+SEL
Sbjct: 394 GSGCLLWFSELIDMRQLNENGQDIYIRMAASEL 426


>emb|CBI20438.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  264 bits (674), Expect = 1e-68
 Identities = 116/215 (53%), Positives = 151/215 (70%)
 Frame = +1

Query: 1   NGIRFSGTPDLKPNAIFTYEVIHNAEEIYYRYQLVNQSVILRVVLTQTSNEAHLQLSTWV 180
           NGIRF+G P+L+PN +F Y  + N +E+Y+ Y+LVN SV+ R+VL    N   +Q   W+
Sbjct: 197 NGIRFNGFPELRPNPVFNYSFVFNEKEMYFTYKLVNSSVLSRLVLNPNGN---VQRLIWI 253

Query: 181 EKSNSWGLLVTIPRDRCDDYELCGAYGICDMRNVELCKCLKGFKPKSPQEWDATDWSQGC 360
            ++ SW +  T  +D CD Y LCGAY  C++     C C+KGF PK P +WD  DWS GC
Sbjct: 254 GRTKSWNVYSTAYKDDCDSYALCGAYSTCNIHRSPRCGCMKGFVPKFPYQWDTMDWSNGC 313

Query: 361 QRETFVNCSNGEGFRKYTGV*LPDTTGSWVNTSMNLEECRVKCLRNCSCMAYTNSDIRGG 540
            R+T ++C  G+GF K +GV LPDT  SW N SMNL+EC   CLRNCSC AYTNSDI+GG
Sbjct: 314 VRKTSLDCQKGDGFVKCSGVKLPDTRNSWFNESMNLKECASLCLRNCSCSAYTNSDIKGG 373

Query: 541 GSGCIMWFSDLIDIKQLVDVGQDIYIRMASSELDS 645
           GSGC++WF DLID+K+  + GQD YIRMA+SELD+
Sbjct: 374 GSGCLLWFGDLIDVKEFTENGQDFYIRMAASELDA 408


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