BLASTX nr result

ID: Cimicifuga21_contig00017187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017187
         (1784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...    70   2e-09
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    67   2e-08
ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [S...    65   4e-08
ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 ...    59   4e-06
ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [S...    59   5e-06

>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
            gi|241916322|gb|EER89466.1| hypothetical protein
            SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
 Frame = +2

Query: 341  PMNELDSVMENLHQHLTINTIPIVRFPPNQIQQDIQDWKFVLLGKPLKPTFKSADKILSS 520
            P   +  +  NL   LT + + I+ F  ++    +   ++ L+GK L P       + S+
Sbjct: 16   PKPNVTELFRNLK--LTEDEVAILEFSDDEDSDTMAPTEWTLVGKVLSPVPVHVTTVRSA 73

Query: 521  LRNQMGHR---KEIIISPTEEGFYFLRFKREELMKKILRDSPWQTFGQCFLLQKYNPAIP 691
            +R   G+    K   I   E+  + + F      +++L  SPW       LLQ+Y+  + 
Sbjct: 74   MRLAWGNPIGLKFRAIGEKEDNLFVVEFGSARDKERVLGGSPWMVGKYSVLLQEYDEKLC 133

Query: 692  LKETQI*TIDIWFTLLNLPSNRNSIAHITFLLKNILLIVDIDPKPDEPVPASGDRVHTRL 871
              + +   +D+W  +LNLP    + +  +  +  I  +V++D   D     +  R    +
Sbjct: 134  AADIKFDRLDLWVRILNLPLGWMNRSRGSRAMGLIGQVVEMDVDADGKASGAFLRARVSM 193

Query: 872  RLDKPIPQGIII---DDGSPQMTEVSFNYINWPKQFCSFCLFLGHKWLTCESRI-*EEGN 1039
             +DKP+ +GI++       P+  +  +  + +    C  C  +GH  + C + +  +E  
Sbjct: 194  EIDKPVRRGILLRVNKTDEPRWFQAQYEKLPY---ICLACGIIGHSDMECPTPVARDEDG 250

Query: 1040 KLLWEGDKAGTSRLQTKTS 1096
            KL ++ +  G    +T+TS
Sbjct: 251  KLPYDVNLKGPRGKETQTS 269


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
 Frame = +2

Query: 383  HLTINTIPIVRFPPNQIQQDIQDWKFVLLGKPLKPTFKSADKILSSLRNQMGHR---KEI 553
            +LT   + +V F   +  +++   +F ++GK L P     + I ++++   G+    K  
Sbjct: 34   NLTEEEVAVVEFSDEEDAEELPPIEFAVVGKVLSPMAVHVNTIRTAMKPAWGNPFGLKFR 93

Query: 554  IISPTEEGFYFLRFKREELMKKILRDSPWQTFGQCFLLQKYNPAIPLKETQI*TIDIWFT 733
             I    +  +   F  +  ++++L  +PW       +L+ Y+  +   E     +DIW  
Sbjct: 94   AIGEKGDNMFMAEFGTKADLERVLSGTPWMVGKHAIVLKLYDEKLSASEIVFDRMDIWVR 153

Query: 734  LLNLP---SNRNSIAHITFLLKNILLIVDIDPKPDEPVPASGDRVHTRLRLDKPIPQGII 904
            +LNLP    N+   A +  L+ +   +V +D   D     +  R    + +DKP+ +G++
Sbjct: 154  ILNLPLGWMNQQRGARVMSLIGS---VVKLDVDSDGKASGAFLRGRVSIEIDKPLRRGVL 210

Query: 905  I---DDGSPQMTEVSFNYINWPKQFCSFCLFLGHKWLTC 1012
            +       P+  E  +  + +   +CS C  LGH  + C
Sbjct: 211  LRMSKSEEPKWFEAQYEKLPY---YCSSCGMLGHSEIGC 246


>ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
            gi|241942053|gb|EES15198.1| hypothetical protein
            SORBIDRAFT_07g024435 [Sorghum bicolor]
          Length = 785

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 6/234 (2%)
 Frame = +2

Query: 341  PMNELDSVMENLHQHLTINTIPIVRFPPNQIQQDIQDWKFVLLGKPLKPTFKSADKILSS 520
            P   +  +  NL   LT + + I+ F  ++    +   ++ L+GK L P       + S+
Sbjct: 16   PKPNVTELFRNLK--LTEDEVAILEFSDDEDSDTMAPTEWTLVGKVLSPAPVHVTTVRSA 73

Query: 521  LRNQMGHR---KEIIISPTEEGFYFLRFKREELMKKILRDSPWQTFGQCFLLQKYNPAIP 691
            +R   G+    K   I   E+  + + F      +++L  SPW       LLQ+Y+  + 
Sbjct: 74   MRPAWGNPIGLKFRAIGEKEDNLFVVEFGSARDKERVLGGSPWMVGKYSVLLQEYDEKLC 133

Query: 692  LKETQI*TIDIWFTLLNLPSNRNSIAHITFLLKNILLIVDIDPKPDEPVPASGDRVHTRL 871
              + +   +D+W  +LNLP    + +  +  +  I  +V++D   D     +  R    +
Sbjct: 134  AADIKFDRLDLWVRILNLPLGWMNRSRGSRAMGLIGQVVEMDVDADGKASGAFLRARVSM 193

Query: 872  RLDKPIPQGIII---DDGSPQMTEVSFNYINWPKQFCSFCLFLGHKWLTCESRI 1024
             +DKP+ +GI++       P+  +  +  + +    C  C  +GH  + C + +
Sbjct: 194  EIDKPVRRGILLRVNKTDEPRWFQAQYEKLPY---MCFACGIIGHSDMECPTPV 244


>ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
            gi|241946953|gb|EES20098.1| hypothetical protein
            SORBIDRAFT_0010s007680 [Sorghum bicolor]
          Length = 531

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
 Frame = +2

Query: 347  NELDSVMENLHQH-LTINTIPIVRFPPNQIQQDIQDWKFVLLGKPLKPTFKSADKILSSL 523
            N   SV++  HQ  LT     +V F   + ++ +   +++L+GK L PT      I S++
Sbjct: 15   NPNPSVIDLFHQLILTEQEEAVVEFSDEEDEEILPQEEWLLVGKVLSPTPIHMTTIRSAI 74

Query: 524  RNQMGHRKEI---IISPTEEGFYFLRFKREELMKKILRDSPWQTFGQCFLLQKYNPAIPL 694
            +   G+   +   +I    +  +   F  +  ++++L  +PW       +L+ YN  +  
Sbjct: 75   KPAWGNPMGLKLRVIGEKVDNMFITEFGCKSDLERVLAGTPWIVGRHAVILKDYNEKLSA 134

Query: 695  KETQI*TIDIWFTLLNLPSNRNSIAHITFLLKNILLIVDIDPKPDEPVPASGDRVHTRLR 874
             E     ++IW  + NLP    +    +  +  I  +V +D   D     +  R    + 
Sbjct: 135  SEIVFDRMEIWVRIPNLPLGWMNQTRGSRAMSLIGPVVRMDVDDDGKASGAFLRARVAIE 194

Query: 875  LDKPIPQGIIIDDGSPQMTEVSFNYINWPK--QFCSFCLFLGHKWLTC 1012
            +DKP+ +G+++     +  E  + +  + K   +C  C  +GH  + C
Sbjct: 195  IDKPLRRGVLLRMSKAE--EPRWFHAQYEKLPYYCFGCGIMGHSEVEC 240


>ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
            gi|241941643|gb|EES14788.1| hypothetical protein
            SORBIDRAFT_07g007880 [Sorghum bicolor]
          Length = 388

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 44/220 (20%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
 Frame = +2

Query: 383  HLTINTIPIVRFPPNQIQQDIQDWKFVLLGKPLKPTFKSADKILSSLRNQMGHRKEIIIS 562
            +LT     I  F  ++  ++ Q   + ++GK L P+    + +  +++   G+   + I 
Sbjct: 35   NLTEGEEVIADFSDDEGDENPQPMNWAVVGKVLSPSIVHVNTVRGAMKPAWGNPWGLKIR 94

Query: 563  PTEE---GFYFLRFKREELMKKILRDSPWQTFGQCFLLQKYNPAIPLKETQI*TIDIWFT 733
               E     +   F  +  M++IL  SPW       +L++Y+  +   E     ++IW  
Sbjct: 95   AFGEKIDNLFVAEFGSKMDMERILAGSPWMVGRHAVILKQYDERLSASEIVFDRMEIWVR 154

Query: 734  LLNLPSNRNSIAHITFLLKNILLIVDIDPKPDEPVPASGDRVHTRLRLDKPIPQGIII-- 907
            +LNLP    ++      +  I  ++ +D   D     +  R    + +DKP+ +G+++  
Sbjct: 155  ILNLPLGWMNLQRGNRAMGLIGNVIKMDVDRDGKASGAFLRARLAIEIDKPLRRGVLLRM 214

Query: 908  -DDGSPQMTEVSFNYINWPKQFCSFCLFLGHKWLTCESRI 1024
                 P+   V +  + +   FC  C  +GH  + C + +
Sbjct: 215  SRSEEPKWFAVQYERLPF---FCFACGIMGHSEIECPNPV 251


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