BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017177
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   158   9e-37
emb|CBI30347.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   157   1e-36
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi...   148   1e-33

>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  158 bits (400), Expect = 9e-37
 Identities = 86/214 (40%), Positives = 136/214 (63%)
 Frame = -2

Query: 644 ATLLKTCTSLSQLKQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSIPTL 465
           +TLLK CT+ S L+Q+HA I R   HQ++ L S  ++L  S S+  ++  VF+ VS P+ 
Sbjct: 29  STLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSPST 88

Query: 464 SLFNHTIRAFSKTPSFCIYSLLLYLQMTRNRIKPDNFTYPFVINSCATLSMLHQGIEVHG 285
            L+N  I+ +S+  S  + ++ L+++M R+   PD FTYP +I +C+ +  + +G+  HG
Sbjct: 89  VLWNTYIKGYSENYSVSL-TVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147

Query: 284 RVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVFDEMSARDVVSYNALLGAHARLGNDMY 105
             +R G    + V  +LID+YGKC  +  + +VFDEM  R+VVS+ A++  +A   +D+ 
Sbjct: 148 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF-SDLV 206

Query: 104 RARTVFNEMPLRNVISWNAMIVGYVNGRDLASAR 3
            AR +F+EMP +N +SWNA+I GYV   DL SAR
Sbjct: 207 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSAR 240


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  157 bits (398), Expect = 1e-36
 Identities = 85/214 (39%), Positives = 136/214 (63%)
 Frame = -2

Query: 644 ATLLKTCTSLSQLKQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSIPTL 465
           +TLLK CT+ S L+Q+HA I R   HQ++ + S  ++L  S S+  ++  VF+ VS P+ 
Sbjct: 77  STLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPST 136

Query: 464 SLFNHTIRAFSKTPSFCIYSLLLYLQMTRNRIKPDNFTYPFVINSCATLSMLHQGIEVHG 285
            L+N  I+ +S+  S  + ++ L+++M R+   PD FTYP +I +C+ +  + +G+  HG
Sbjct: 137 VLWNTYIKGYSENYSVSL-TVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 195

Query: 284 RVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVFDEMSARDVVSYNALLGAHARLGNDMY 105
             +R G    + V  +LID+YGKC  +  + +VFDEM  R+VVS+ A++  +A   +D+ 
Sbjct: 196 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF-SDLV 254

Query: 104 RARTVFNEMPLRNVISWNAMIVGYVNGRDLASAR 3
            AR +F+EMP +N +SWNA+I GYV   DL SAR
Sbjct: 255 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSAR 288


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  157 bits (398), Expect = 1e-36
 Identities = 85/214 (39%), Positives = 136/214 (63%)
 Frame = -2

Query: 644 ATLLKTCTSLSQLKQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSIPTL 465
           +TLLK CT+ S L+Q+HA I R   HQ++ + S  ++L  S S+  ++  VF+ VS P+ 
Sbjct: 29  STLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPST 88

Query: 464 SLFNHTIRAFSKTPSFCIYSLLLYLQMTRNRIKPDNFTYPFVINSCATLSMLHQGIEVHG 285
            L+N  I+ +S+  S  + ++ L+++M R+   PD FTYP +I +C+ +  + +G+  HG
Sbjct: 89  VLWNTYIKGYSENYSVSL-TVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147

Query: 284 RVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVFDEMSARDVVSYNALLGAHARLGNDMY 105
             +R G    + V  +LID+YGKC  +  + +VFDEM  R+VVS+ A++  +A   +D+ 
Sbjct: 148 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF-SDLV 206

Query: 104 RARTVFNEMPLRNVISWNAMIVGYVNGRDLASAR 3
            AR +F+EMP +N +SWNA+I GYV   DL SAR
Sbjct: 207 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSAR 240


>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
           [Vitis vinifera]
          Length = 537

 Score =  150 bits (379), Expect = 2e-34
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 5/212 (2%)
 Frame = -2

Query: 653 DRAATLLKTCTSLSQLKQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSI 474
           D    +LK C ++ +LK+IHA+I +    Q++ L + +V +   +    +++ +F  V+ 
Sbjct: 15  DMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVAD 74

Query: 473 PTLSLFNHTIRAFSKTPSFCIYSLLLYLQMT-----RNRIKPDNFTYPFVINSCATLSML 309
           P   L+N  IRA+     + + ++ +Y QM       N I PD FT+PFV+ SCA L   
Sbjct: 75  PNAFLYNAMIRAYKHNKVY-VLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCY 133

Query: 308 HQGIEVHGRVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVFDEMSARDVVSYNALLGAH 129
             G +VHG V + G  S   V N+L++MY KC+ LD ++RVF+EM+ RD VS+N L+  H
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGH 193

Query: 128 ARLGNDMYRARTVFNEMPLRNVISWNAMIVGY 33
            RLG  M RAR +F EM  + + SW A++ GY
Sbjct: 194 VRLG-QMRRARAIFEEMQDKTIFSWTAIVSGY 224



 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
 Frame = -2

Query: 638 LLKTCTSLSQL---KQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSIPT 468
           ++K+C  L      KQ+H ++F+  +  N  + + LV +Y    S   +H VF  ++   
Sbjct: 123 VVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERD 182

Query: 467 LSLFNHTIRA-------------FSKTPSFCIYS-----------------LLLYLQMTR 378
              +N  I               F +     I+S                 L  + +M  
Sbjct: 183 AVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQM 242

Query: 377 NRIKPDNFTYPFVINSCATLSMLHQGIEVHGRVIRTGFVSYLPVSNALIDMYGKCELLDR 198
             I+PD  +   V+  CA L  L  G  +H    + GF+  + V NALI+MY KC  +D+
Sbjct: 243 VGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQ 302

Query: 197 SYRVFDEMSARDVVSYNALLGAHARLGNDMYRARTVFNEM 78
             R+FD+M  RDV+S++ ++   A  G     A  +F EM
Sbjct: 303 GRRLFDQMKERDVISWSTMIVGLANHGR-AREAIELFQEM 341


>ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 535

 Score =  148 bits (373), Expect = 1e-33
 Identities = 79/216 (36%), Positives = 120/216 (55%)
 Frame = -2

Query: 653 DRAATLLKTCTSLSQLKQIHAYIFRSLRHQNNSLASILVSLYTSFSSPYHSHYVFSSVSI 474
           +R  T L+ C  +++LK+IHA+I +    Q+N L + ++ L  + S   ++  +F  +  
Sbjct: 8   NRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLEN 67

Query: 473 PTLSLFNHTIRAFSKTPSFCIYSLLLYLQMTRNRIKPDNFTYPFVINSCATLSMLHQGIE 294
           P +  +N  IR ++      +   +    +T     PD FT+PFVI SCA L     G +
Sbjct: 68  PNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQ 127

Query: 293 VHGRVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVFDEMSARDVVSYNALLGAHARLGN 114
           VH  V + G  ++    NALIDMY KC  +  +Y+V++EM+ RD VS+N+L+  H RLG 
Sbjct: 128 VHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLG- 186

Query: 113 DMYRARTVFNEMPLRNVISWNAMIVGYVNGRDLASA 6
            M  AR VF+EMP R ++SW  MI GY  G   A A
Sbjct: 187 QMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADA 222



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 45/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 542 LVSLYTSFSSPYHSHYVFSSVSIPTLSLFNHTIRAFSKTPSFCIYSLLLYLQMTRNRIKP 363
           L+S +        +  VF  +   T+  +   I  +++   +   +L ++ +M    I+P
Sbjct: 178 LISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYAD-ALGIFREMQVVGIEP 236

Query: 362 DNFTYPFVINSCATLSMLHQGIEVHGRVIRTGFVSYLPVSNALIDMYGKCELLDRSYRVF 183
           D  +   V+ +CA L  L  G  +H    ++GF+    V NAL++MY KC  +D ++ +F
Sbjct: 237 DEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLF 296

Query: 182 DEMSARDVVSYNALLGAHARLGNDMYRARTVFNEMPLRNVISWNAMIVGYVN 27
           ++M  +DV+S++ ++G  A  G   Y A  VF +M    V       VG ++
Sbjct: 297 NQMIEKDVISWSTMIGGLANHGKG-YAAIRVFEDMQKAGVTPNGVTFVGVLS 347