BLASTX nr result

ID: Cimicifuga21_contig00017152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017152
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [M...    69   4e-10
emb|CBI15935.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...    62   4e-08

>ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500996|gb|AES82199.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 796

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/79 (46%), Positives = 49/79 (62%)
 Frame = -1

Query: 240 SPPVNPFSDEVGIEAEYCPQAVIDWNEIGSHKDKVKAANQNENTRSLTLRAKKHLVAVGW 61
           SPP +     + IE EYCPQAV +W  +   KD+ ++  + +    L L+AK+HL  +GW
Sbjct: 5   SPPPH-----INIEPEYCPQAVFEWYRLTGLKDRKESFRRKD----LALKAKQHLFYLGW 55

Query: 60  RLWYITKMKNRRELRYTSP 4
           R WYI K K R ELRYTSP
Sbjct: 56  RFWYIDK-KCRWELRYTSP 73


>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 LCAQTTDLDLP-VKESPPVNPFSDE--VGIEAEYCPQAVIDWNEIGSHKDKVKAANQNEN 112
           LC+   D+    V E    +P  D+  V I+ EYCP AVI++  +G   DK     ++  
Sbjct: 47  LCSSHDDVKKSQVSEQEKTDPCRDDDLVDIDREYCPHAVINYYSLGL--DKKDYRRKDSV 104

Query: 111 TRSLTLRAKKHLVAVGWRLWYITKMKNRRELRYTSPK 1
           T +L  +AKKHL  +GW  WY  K K +RELRY SPK
Sbjct: 105 TSNLIAKAKKHLSFMGWLFWYAYK-KGKRELRYCSPK 140


>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 DEVGIEAEYCPQAVIDWNEIGSHKDKVKAANQNENTRSLTL--RAKKHLVAVGWRLWYIT 43
           D V I+ EYCPQAV+++  +G   DK +  ++ ++ RSL L  +AKKHL  +GW  WY  
Sbjct: 564 DRVDIDHEYCPQAVVNYYFLG--LDKKEHHSRKDDIRSLNLKSKAKKHLSFMGWTFWYAY 621

Query: 42  KMKNRRELRYTSPK 1
           + + +RE+RY SPK
Sbjct: 622 R-RGKREMRYFSPK 634


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