BLASTX nr result
ID: Cimicifuga21_contig00017152
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00017152 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [M... 69 4e-10 emb|CBI15935.3| unnamed protein product [Vitis vinifera] 65 4e-09 ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243... 62 4e-08 >ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355500996|gb|AES82199.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Length = 796 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/79 (46%), Positives = 49/79 (62%) Frame = -1 Query: 240 SPPVNPFSDEVGIEAEYCPQAVIDWNEIGSHKDKVKAANQNENTRSLTLRAKKHLVAVGW 61 SPP + + IE EYCPQAV +W + KD+ ++ + + L L+AK+HL +GW Sbjct: 5 SPPPH-----INIEPEYCPQAVFEWYRLTGLKDRKESFRRKD----LALKAKQHLFYLGW 55 Query: 60 RLWYITKMKNRRELRYTSP 4 R WYI K K R ELRYTSP Sbjct: 56 RFWYIDK-KCRWELRYTSP 73 >emb|CBI15935.3| unnamed protein product [Vitis vinifera] Length = 687 Score = 65.5 bits (158), Expect = 4e-09 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Frame = -1 Query: 282 LCAQTTDLDLP-VKESPPVNPFSDE--VGIEAEYCPQAVIDWNEIGSHKDKVKAANQNEN 112 LC+ D+ V E +P D+ V I+ EYCP AVI++ +G DK ++ Sbjct: 47 LCSSHDDVKKSQVSEQEKTDPCRDDDLVDIDREYCPHAVINYYSLGL--DKKDYRRKDSV 104 Query: 111 TRSLTLRAKKHLVAVGWRLWYITKMKNRRELRYTSPK 1 T +L +AKKHL +GW WY K K +RELRY SPK Sbjct: 105 TSNLIAKAKKHLSFMGWLFWYAYK-KGKRELRYCSPK 140 >ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera] Length = 1332 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%) Frame = -1 Query: 216 DEVGIEAEYCPQAVIDWNEIGSHKDKVKAANQNENTRSLTL--RAKKHLVAVGWRLWYIT 43 D V I+ EYCPQAV+++ +G DK + ++ ++ RSL L +AKKHL +GW WY Sbjct: 564 DRVDIDHEYCPQAVVNYYFLG--LDKKEHHSRKDDIRSLNLKSKAKKHLSFMGWTFWYAY 621 Query: 42 KMKNRRELRYTSPK 1 + + +RE+RY SPK Sbjct: 622 R-RGKREMRYFSPK 634