BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017095
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    75   3e-11
sp|Q3EA38.2|FDL48_ARATH RecName: Full=Putative F-box/FBD/LRR-rep...    70   7e-10
ref|NP_680683.4| leucine-rich repeat and FBD domain-containing p...    70   7e-10
ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|3555...    67   6e-09
ref|XP_002533738.1| conserved hypothetical protein [Ricinus comm...    67   8e-09

>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
            F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 21/304 (6%)
 Frame = +3

Query: 33   SLREFKLS-DNSLTLPASVCLLALRTLHLNHVDLQDD----QLLSAIPSLETIILETCSF 197
            SL E +L    +L +P+ +C   L+TL + +V   ++    QL S  P L+ + L+ C +
Sbjct: 315  SLNELRLGLQFTLHIPSGICFPILKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYW 374

Query: 198  GDNKLLTISSLHLKKLIL-------DSKLPTSIEICAPNLISLKINPCQEFSETVRFNSD 356
                 +++S   L+KL +       D      ++I A NL+SL    C    E +  N  
Sbjct: 375  EHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVNLLSLYCI-CNPIIEVIPVN-- 431

Query: 357  LIHLIDACIQL--------PVACFGSMIQLFSLLESVHSLTLASLFRMPFEVKLQDLPTP 512
            L  L+DA I L        P A   S I+L   L SV SL L  +  M F   L +L   
Sbjct: 432  LTSLVDAFIFLGYVYPHDEPYAAQCS-IELLKGLGSVKSLKLNDIILMSFYHTLDNLHLH 490

Query: 513  RHVQAPFYNLKWLKIITSFSDREILVIITILNRSPQIETIFLENEVAKGA-CDTSTSEAE 689
                  FYNL  L + +        +++ IL ++P++E + +   V      D     + 
Sbjct: 491  LLPLPTFYNLTHLYVCSVSPGNACALVMDILRKTPKLEDLTIPGVVLNYLDSDDLILNSL 550

Query: 690  KVWFKHKLCHLKLVEFKGFRGSENEVKFVEFFLENAIVLENLIIMNSKPEEGTSEEMKKT 869
               FK  L   K + F  F G+ +E+KFV F LENA  LE + I  S+      E++   
Sbjct: 551  PCCFKSSL---KRLCFLNFHGNVHEIKFVTFILENAPYLEEIKIHCSRHLSADMEKLDDV 607

Query: 870  GRKL 881
              +L
Sbjct: 608  RNQL 611


>sp|Q3EA38.2|FDL48_ARATH RecName: Full=Putative F-box/FBD/LRR-repeat protein At4g13965
          Length = 427

 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 17/314 (5%)
 Frame = +3

Query: 18  IFTCGSLREFKLSDNSLT-LPASVCLLALRTLHLNHVDLQDDQ----LLSAIPSLETIIL 182
           ++ C +L   +L  + L  +P+S+CL +LRTLHL++VD +D++    LLS  P+LE +++
Sbjct: 133 LYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNLENLVV 192

Query: 183 ETCSFGDNKLLTISSLHLKKLILDSKLP----TSIEICAPNLISLKINPCQEFSETVRFN 350
               F   K  TI+   LK+L + +           I +P+L  LKI          +  
Sbjct: 193 HRYPFSSVKTYTIAVSSLKRLTIYTSSTVDPRAGYVINSPSLTYLKI--------VGQIG 244

Query: 351 SDLIHLIDACIQLPVACFGSMIQLFSLLESVHSLTLASLFRMPFEVKLQDLPTPRHVQAP 530
             LI  +   ++  +     +I   +LLES+ S+    L   P  +K           + 
Sbjct: 245 FCLIENVPELVEASMIVSSQIINK-NLLESLTSVKRLFLEFSPLMIKFP-------AGSI 296

Query: 531 FYNLKWLKIITSFSDREILVIITI-LNRSPQIETIFLENEVAKGACDTSTSEAEKVWFKH 707
           FY L +L+++T   + E L ++T+ LN SP+++ +    ++      +   +    W K 
Sbjct: 297 FYQLVYLELLT--HEAECLNLLTLMLNSSPKLQIL----KLLSPKYQSWKKDVVGKWNKP 350

Query: 708 K------LCHLKLVEFKGFRGSEN-EVKFVEFFLENAIVLENLIIMNSKPEEGTSEEMKK 866
           K      L HL+   +KG+    N E +  ++ L N   L+      SKP   +SEE  K
Sbjct: 351 KIVPECLLFHLETFMWKGYEWKRNDETEVAKYILSNTNRLKRATFF-SKPI--SSEERVK 407

Query: 867 TGRKLLKYPRASSS 908
             + L    RA +S
Sbjct: 408 MVKNLNSVVRALNS 421


>ref|NP_680683.4| leucine-rich repeat and FBD domain-containing protein [Arabidopsis
           thaliana] gi|332657952|gb|AEE83352.1| leucine-rich
           repeat and FBD domain-containing protein [Arabidopsis
           thaliana]
          Length = 376

 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 17/314 (5%)
 Frame = +3

Query: 18  IFTCGSLREFKLSDNSLT-LPASVCLLALRTLHLNHVDLQDDQ----LLSAIPSLETIIL 182
           ++ C +L   +L  + L  +P+S+CL +LRTLHL++VD +D++    LLS  P+LE +++
Sbjct: 82  LYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNLENLVV 141

Query: 183 ETCSFGDNKLLTISSLHLKKLILDSKLP----TSIEICAPNLISLKINPCQEFSETVRFN 350
               F   K  TI+   LK+L + +           I +P+L  LKI          +  
Sbjct: 142 HRYPFSSVKTYTIAVSSLKRLTIYTSSTVDPRAGYVINSPSLTYLKI--------VGQIG 193

Query: 351 SDLIHLIDACIQLPVACFGSMIQLFSLLESVHSLTLASLFRMPFEVKLQDLPTPRHVQAP 530
             LI  +   ++  +     +I   +LLES+ S+    L   P  +K           + 
Sbjct: 194 FCLIENVPELVEASMIVSSQIINK-NLLESLTSVKRLFLEFSPLMIKFP-------AGSI 245

Query: 531 FYNLKWLKIITSFSDREILVIITI-LNRSPQIETIFLENEVAKGACDTSTSEAEKVWFKH 707
           FY L +L+++T   + E L ++T+ LN SP+++ +    ++      +   +    W K 
Sbjct: 246 FYQLVYLELLT--HEAECLNLLTLMLNSSPKLQIL----KLLSPKYQSWKKDVVGKWNKP 299

Query: 708 K------LCHLKLVEFKGFRGSEN-EVKFVEFFLENAIVLENLIIMNSKPEEGTSEEMKK 866
           K      L HL+   +KG+    N E +  ++ L N   L+      SKP   +SEE  K
Sbjct: 300 KIVPECLLFHLETFMWKGYEWKRNDETEVAKYILSNTNRLKRATFF-SKPI--SSEERVK 356

Query: 867 TGRKLLKYPRASSS 908
             + L    RA +S
Sbjct: 357 MVKNLNSVVRALNS 370


>ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|355513459|gb|AES95082.1|
           F-box family-3 [Medicago truncatula]
          Length = 452

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 7/280 (2%)
 Frame = +3

Query: 3   KLTPRIFTCGSLREFKLSDN---SLTLPASVCLLALRTLHLN--HVDLQD-DQLLSAIPS 164
           KL   +F+C +L    LS     S+    +V L +L+ L ++  +V++   + LL    S
Sbjct: 148 KLPQALFSCPNLVSLSLSGAVHVSIQHSTAVSLPSLKMLMIDIGYVEVSSVNALLDGCSS 207

Query: 165 LETIILETCSFGDNKLLTISSLHLKKLILDSKLPTSIEICAPNLISLKINPCQEFSETVR 344
           +E + L   +   +K+    SL   K+ +++ +   +E+ AP+L  L I     F E   
Sbjct: 208 IEILDLGFSAQSLDKVCVPPSLKRLKITIENDVGAYLEVNAPDLQYLNITQIT-FGEGFS 266

Query: 345 FNSDLIHLIDACIQLPVACFGSMIQLFSLLESVHSLTLASLFRMPFEVK-LQDLPTPRHV 521
             S L ++++A + +     GS++ L +L  ++       L R   +VK L   P     
Sbjct: 267 LYS-LPNVVEAYLDVFPTSLGSIVPLHNLFGALSGAKHLMLSRSTTKVKWLLGEPHEMLF 325

Query: 522 QAPFYNLKWLKIITSFSDREILVIITILNRSPQIETIFLENEVAKGACDTSTSEAEKVWF 701
           Q   Y ++   +++ F+   +L +I    + P ++ + ++N+  +      + +      
Sbjct: 326 QEFQYLIRLELVLSWFNSNSLLHLI---QKCPLLQPLIIQNDKERSPILAWSPQPSIP-- 380

Query: 702 KHKLCHLKLVEFKGFRGSENEVKFVEFFLENAIVLENLII 821
              + HL  +EFKGFRG  +EV FVE+ L+N  VL+ LII
Sbjct: 381 NCLVSHLSFIEFKGFRGFPDEVSFVEYVLQNGHVLKTLII 420


>ref|XP_002533738.1| conserved hypothetical protein [Ricinus communis]
            gi|223526344|gb|EEF28641.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 539

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 32/303 (10%)
 Frame = +3

Query: 12   PRIFTCGS-----LREFKLSDNSLTLPASVCLLALRTLHLNHVDLQD---DQLLSAIPSL 167
            P    CGS     L+ F L+  +        L +L+ LHL  + + D   +++ S  P L
Sbjct: 195  PYELPCGSFAPKILKSFILTFCNFRTSNFNVLSSLQKLHLKQLKVLDGSIEEIASKCPVL 254

Query: 168  ETIILETCSFGDNKLLTISSLHLKKLIL---DSKLPTSIEICAPNLISLKI-NPCQEFSE 335
            E IILE C   D   ++   + +K+L +    S     + I  PNL+ L+I   C   + 
Sbjct: 255  EDIILEYCLIPDGFFVSKEDIKIKRLSVVHCASNERLRMSISTPNLVMLRIIGECLNSAS 314

Query: 336  TVRFNSDLIHLIDACIQLPV-----ACFGSMIQLFSLLESVHSLTLA--SLFRMPFEVKL 494
              +      HLIDA I + V     A   ++  L   L    SLT++  S+  +P E  L
Sbjct: 315  IQKAT----HLIDAQIGICVIYTNNADGDALNTLLRGLRHCQSLTVSTWSIQVLPIESTL 370

Query: 495  QDLPTPRHVQAPFYNLKWLKIITSFSDREILVIITILNRSPQIETIF------------- 635
            Q     + +  P   +K LK+I + S +E+  +  +L     +E +              
Sbjct: 371  Q-----QQLPIPLRKVKHLKLIAAISKKELARLSCLLRSCSNLEILTAVLSGPLDLLGFE 425

Query: 636  LENEVAKGACDTSTSEAEKVWFKHKLCHLKLVEFKGFRGSENEVKFVEFFLENAIVLENL 815
            L N       + +  E++ + F      LK +   G  G  NEV+ + F L+NA+ LE +
Sbjct: 426  LPNSATDDIFEQTFWESQTLPFPCLRNSLKQLTVTGLMGRINEVEMIMFILKNAVALEKV 485

Query: 816  IIM 824
            I++
Sbjct: 486  ILL 488