BLASTX nr result

ID: Cimicifuga21_contig00017057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017057
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich...   136   2e-30
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...   134   7e-30
ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trich...   133   2e-29
ref|XP_002338571.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...   132   3e-29

>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1052

 Score =  136 bits (343), Expect = 2e-30
 Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
 Frame = +3

Query: 57  LRTLIVLNGWRQGFPT-DFILPVFKYLRALSFKNFRGVTLPDSVGNLRHLRYLNLSSSSY 233
           LR++I+    R G    D      K+LRAL    +   TLP+S+ NL+HLR+L++S +  
Sbjct: 507 LRSIILPETVRHGSDNLDLCFTQQKHLRALDINIYDQNTLPESISNLKHLRFLDVSYT-L 565

Query: 234 ITSLPKSLYRLRNLQTLKLKGCSKLEKLPEYMRTMTSLRHLDIRECEELSEMPIGMGQLT 413
           I  LP+S   L+NLQTL L+ C KL KLP+ M+ M +L ++DIR C  L  MP GMG+LT
Sbjct: 566 IQKLPESTTSLQNLQTLNLRSCLKLVKLPKGMKHMKNLVYIDIRACYSLRFMPCGMGELT 625

Query: 414 CLRTLSIFIVGSDNGRHIKELQGMEHLSGELTVKGLQHVKTSRD 545
           CLR L IFIVG ++GR I+EL  +++L+GEL +  L +VK S+D
Sbjct: 626 CLRKLGIFIVGKEDGRGIEELGRLDNLAGELRITYLDNVKNSKD 669



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = +3

Query: 168  TLPDSVGNLRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSKLEKLPEYMRTMTSL 347
            +L + V +L  L  LNLS    + SLP+S+  L +L++L ++ C+ L  LP+ +  +TSL
Sbjct: 929  SLSEGVQHLTALEDLNLSHCPELNSLPESIQHLSSLRSLSIQYCTGLTSLPDQIGYLTSL 988

Query: 348  RHLDIRECEELSEMPIGMGQLTCLRTLSI 434
              L+IR C  L   P G+  L  L  L I
Sbjct: 989  SSLNIRGCSNLVSFPDGVQTLNNLSKLII 1017


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1091

 Score =  134 bits (338), Expect = 7e-30
 Identities = 72/140 (51%), Positives = 98/140 (70%)
 Frame = +3

Query: 126 KYLRALSFKNFRGVTLPDSVGNLRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSK 305
           K+LRAL    +   TLP+S+ NL+HLR+L++S +S I  LP+S+  L+NLQTL L+ C+K
Sbjct: 528 KHLRALVINIYHQNTLPESICNLKHLRFLDVSYTS-IQKLPESITSLQNLQTLNLRDCAK 586

Query: 306 LEKLPEYMRTMTSLRHLDIRECEELSEMPIGMGQLTCLRTLSIFIVGSDNGRHIKELQGM 485
           L +LP+ MR M SL ++DIR C  L  MP GMG+LTCLR L IFIVG ++GR I+EL  +
Sbjct: 587 LIQLPKGMRRMQSLVYIDIRGCYSLLSMPCGMGELTCLRKLGIFIVGKEDGRGIEELGRL 646

Query: 486 EHLSGELTVKGLQHVKTSRD 545
            +L+GE  +  L  VK S D
Sbjct: 647 NNLAGEFRITYLDKVKNSTD 666



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +3

Query: 192  LRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSKLEKLPEYMRTMTSLRHLDIREC 371
            L  LR L++       SL + +  L  L+ L L GC +L  LPE ++ +TSLR L I  C
Sbjct: 952  LSSLRRLSIKYCDQFASLSEGVRHLTALEDLSLFGCPELNSLPESIQHLTSLRSLSIWYC 1011

Query: 372  EELSEMPIGMGQLTCLRTLSI 434
            + L+ +P  +G LT L +L I
Sbjct: 1012 KGLTSLPYQIGYLTSLSSLKI 1032


>ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844684|gb|EEE82231.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1086

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/140 (50%), Positives = 100/140 (71%)
 Frame = +3

Query: 126 KYLRALSFKNFRGVTLPDSVGNLRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSK 305
           K+LRAL    +   TLP+S+ NL+HLR+L++S +S I  LP+S+  L+NL TL L+ C+K
Sbjct: 565 KHLRALVINIYHQKTLPESICNLKHLRFLDVSYTS-IRKLPESITSLQNLHTLNLRCCAK 623

Query: 306 LEKLPEYMRTMTSLRHLDIRECEELSEMPIGMGQLTCLRTLSIFIVGSDNGRHIKELQGM 485
           L +LP+ M+ M SL ++DI  C  L  MP GMG+LTCLR L IFIVG ++GR I+EL  +
Sbjct: 624 LIQLPKGMKLMKSLVYVDITYCNSLQFMPCGMGELTCLRKLGIFIVGKEDGRGIEELGRL 683

Query: 486 EHLSGELTVKGLQHVKTSRD 545
           ++L+GEL +  L +VK S+D
Sbjct: 684 DNLAGELRITYLDNVKNSKD 703



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 33/89 (37%), Positives = 49/89 (55%)
 Frame = +3

Query: 168  TLPDSVGNLRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSKLEKLPEYMRTMTSL 347
            +L + V +L  L  LNLS    + SLP+S+  L  L++L ++ C+ L  LP+ +  +TSL
Sbjct: 963  SLSEGVQHLTALEDLNLSHCPELNSLPESIQHLSFLRSLSIQYCTGLTSLPDQIGYLTSL 1022

Query: 348  RHLDIRECEELSEMPIGMGQLTCLRTLSI 434
              L+IR C  L   P G+  L  L  L I
Sbjct: 1023 SSLNIRGCSNLVSFPDGVQTLNNLSKLII 1051


>ref|XP_002338571.1| predicted protein [Populus trichocarpa] gi|222872876|gb|EEF10007.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  132 bits (333), Expect = 3e-29
 Identities = 70/140 (50%), Positives = 100/140 (71%)
 Frame = +3

Query: 126 KYLRALSFKNFRGVTLPDSVGNLRHLRYLNLSSSSYITSLPKSLYRLRNLQTLKLKGCSK 305
           K+LRAL    +   TLP+S+ NL+HLR+L++S +S I  LP+S+  L+NLQTL L+ C+K
Sbjct: 135 KHLRALVINIYHQNTLPESICNLKHLRFLDVSYTS-IQKLPESITSLQNLQTLNLRCCAK 193

Query: 306 LEKLPEYMRTMTSLRHLDIRECEELSEMPIGMGQLTCLRTLSIFIVGSDNGRHIKELQGM 485
           L +LP+ M+ M SL ++DIR+C  L  MP GMG+LTCLR L +FIVG ++GR I+EL  +
Sbjct: 194 LIQLPKGMKQMKSLVYIDIRDCYSLRFMPCGMGELTCLRKLCMFIVGKEDGRGIEELGRL 253

Query: 486 EHLSGELTVKGLQHVKTSRD 545
            +L+GE  +  L +VK S D
Sbjct: 254 NNLAGEFRITYLDNVKNSTD 273


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1063

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/163 (46%), Positives = 107/163 (65%)
 Frame = +3

Query: 57  LRTLIVLNGWRQGFPTDFILPVFKYLRALSFKNFRGVTLPDSVGNLRHLRYLNLSSSSYI 236
           LR   +LNGW +       +P  K+ RALS +N      P S+ +L+HLRYL++S S + 
Sbjct: 510 LRNDDLLNGWGK-------IPDRKH-RALSLRNIPVENFPKSICDLKHLRYLDVSGSEFK 561

Query: 237 TSLPKSLYRLRNLQTLKLKGCSKLEKLPEYMRTMTSLRHLDIRECEELSEMPIGMGQLTC 416
           T LP+S+  L+NLQTL L+ C +L +LP+ M+ M SL +LDI  C  L  MP GMGQL C
Sbjct: 562 T-LPESITSLQNLQTLDLRYCRELIQLPKGMKHMKSLVYLDITGCRSLRFMPAGMGQLIC 620

Query: 417 LRTLSIFIVGSDNGRHIKELQGMEHLSGELTVKGLQHVKTSRD 545
           LR L++FIVG +NGR I EL+ + +L+GEL++  L +VK  +D
Sbjct: 621 LRKLTLFIVGGENGRRINELERLNNLAGELSITDLVNVKNLKD 663


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