BLASTX nr result

ID: Cimicifuga21_contig00017022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017022
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325917.1| predicted protein [Populus trichocarpa] gi|2...   231   9e-59
emb|CAN75527.1| hypothetical protein VITISV_043600 [Vitis vinifera]   223   2e-56
ref|XP_002279538.1| PREDICTED: uncharacterized protein LOC100241...   222   6e-56
ref|XP_002520849.1| conserved hypothetical protein [Ricinus comm...   217   1e-54
gb|AFK38802.1| unknown [Lotus japonicus]                              214   2e-53

>ref|XP_002325917.1| predicted protein [Populus trichocarpa] gi|222862792|gb|EEF00299.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  231 bits (589), Expect = 9e-59
 Identities = 117/178 (65%), Positives = 136/178 (76%)
 Frame = +3

Query: 24  MEMRALPLSSSQQIFPPSMKVSQYVSTYRPSKISNFRGVWAKSXXXXXXXXXXXXXXXXX 203
           M +R LPLS S+  FPP + ++Q +S YRP+K  NF+ + AK+                 
Sbjct: 1   MGLRTLPLSPSRNCFPPHVGIAQNLSNYRPNKSFNFK-ISAKTESGNEEEPKKSK----- 54

Query: 204 QSLFGIVTEALDFSQVRSAEDAALIDDARETTSSGGRMNREQYGALRRKIGGTYKDFFKS 383
           QSLF  V EALDFSQVRSA+DA L+++ARE TSSGGRM REQYGALRRKIGGTYKDFFKS
Sbjct: 55  QSLFSSVAEALDFSQVRSAKDAELLEEARENTSSGGRMTREQYGALRRKIGGTYKDFFKS 114

Query: 384 YVDVDGEYVEEGWVDKTCKVCKKDTRNEPRQVDNLGRYVHVACLEESKSGNFFTRWFS 557
           YVDVDG+YVEEGWVDKTCKVCKKDT  +PRQVD LGRYVHV C+E++ SGNFFTR FS
Sbjct: 115 YVDVDGQYVEEGWVDKTCKVCKKDTSGDPRQVDKLGRYVHVECMEKANSGNFFTRLFS 172


>emb|CAN75527.1| hypothetical protein VITISV_043600 [Vitis vinifera]
          Length = 176

 Score =  223 bits (569), Expect = 2e-56
 Identities = 119/180 (66%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  MEMRALPLSSSQQIFPPSMKVSQYVSTY-RPSKISNFRGVWAKSXXXXXXXXXXXXXXXX 200
           M +RALPLS S   F P++ V+Q +  + R S+ S F  V AK                 
Sbjct: 1   MGLRALPLSPSHNSFSPNLGVAQTLPRHHRLSRSSKFVVVSAK----VDEKNENEEPKKS 56

Query: 201 XQSLFGIVTEALDFSQVRSAEDAALIDDARETTSSGGRMNREQYGALRRKIGGTYKDFFK 380
            QSLF  VTEALDFSQVRS EDA L++ AR+ T SGGRM+REQYGALRRKIGGTYKDFFK
Sbjct: 57  KQSLFSSVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFK 116

Query: 381 SYVDVDGEYVEEGWVDKTCKVCKKDTRNEPRQVDNLGRYVHVACLEESKSGNFFTRWFSR 560
           SYVDVDG+YVEEGWVDKTCKVCK+DTR EPRQVD  GRYVHVACLE+S SGNFFTR FSR
Sbjct: 117 SYVDVDGQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLEKSNSGNFFTRLFSR 176


>ref|XP_002279538.1| PREDICTED: uncharacterized protein LOC100241651 [Vitis vinifera]
           gi|297736510|emb|CBI25381.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  222 bits (565), Expect = 6e-56
 Identities = 118/180 (65%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  MEMRALPLSSSQQIFPPSMKVSQYVSTY-RPSKISNFRGVWAKSXXXXXXXXXXXXXXXX 200
           M +R LPLS S   F P++ V+Q +  + R S+ S F  V AK                 
Sbjct: 1   MGLRVLPLSPSHNSFSPNLGVAQTLPRHHRLSRSSKFVVVSAK----VDEKNENEEPKKS 56

Query: 201 XQSLFGIVTEALDFSQVRSAEDAALIDDARETTSSGGRMNREQYGALRRKIGGTYKDFFK 380
            QSLF  VTEALDFSQVRS EDA L++ AR+ T SGGRM+REQYGALRRKIGGTYKDFFK
Sbjct: 57  KQSLFSSVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFK 116

Query: 381 SYVDVDGEYVEEGWVDKTCKVCKKDTRNEPRQVDNLGRYVHVACLEESKSGNFFTRWFSR 560
           SYVDVDG+YVEEGWVDKTCKVCK+DTR EPRQVD  GRYVHVACLE+S SGNFFTR FSR
Sbjct: 117 SYVDVDGQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLEKSNSGNFFTRLFSR 176


>ref|XP_002520849.1| conserved hypothetical protein [Ricinus communis]
           gi|223539980|gb|EEF41558.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 175

 Score =  217 bits (553), Expect = 1e-54
 Identities = 118/180 (65%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  MEMRALPLSSSQQIFPPSMKVSQY-VSTYRPSKISNFRGVWAKSXXXXXXXXXXXXXXXX 200
           M +R LPL  SQ  FP    V Q  +S  R  +  NFR V+AKS                
Sbjct: 1   MGLRTLPLWPSQTYFPRQAGVGQKNLSESRLQRSPNFR-VFAKSENAKEETKKSESK--- 56

Query: 201 XQSLFGIVTEALDFSQVRSAEDAALIDDARETTSSGGRMNREQYGALRRKIGGTYKDFFK 380
            QS F  VTEALDFSQVRS +DA L+++ARE T SGGRM REQYGALRRKIGGTYKDFFK
Sbjct: 57  -QSFFSSVTEALDFSQVRSVKDAELLEEARENTKSGGRMTREQYGALRRKIGGTYKDFFK 115

Query: 381 SYVDVDGEYVEEGWVDKTCKVCKKDTRNEPRQVDNLGRYVHVACLEESKSGNFFTRWFSR 560
           SY+DVDG YVEEGWVDKTCKVCKKDTR E RQVD LGRYVHVACLE++ SGNFFTR FSR
Sbjct: 116 SYIDVDGAYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKANSGNFFTRLFSR 175


>gb|AFK38802.1| unknown [Lotus japonicus]
          Length = 179

 Score =  214 bits (544), Expect = 2e-53
 Identities = 115/180 (63%), Positives = 131/180 (72%)
 Frame = +3

Query: 21  RMEMRALPLSSSQQIFPPSMKVSQYVSTYRPSKISNFRGVWAKSXXXXXXXXXXXXXXXX 200
           +M +  LPL+ S + FP +  + Q  +    ++   F  V AK                 
Sbjct: 8   KMGLGTLPLTPSYRSFPSNSGLVQSTNHSMVNRSIKF-SVSAKQEKEEEPKKKK------ 60

Query: 201 XQSLFGIVTEALDFSQVRSAEDAALIDDARETTSSGGRMNREQYGALRRKIGGTYKDFFK 380
            QSLF  VTEALDFSQVRSAEDA LID+ARE T+SG RM+REQYGALRRKIGGTYKDFFK
Sbjct: 61  -QSLFSSVTEALDFSQVRSAEDAQLIDEAREATTSGERMSREQYGALRRKIGGTYKDFFK 119

Query: 381 SYVDVDGEYVEEGWVDKTCKVCKKDTRNEPRQVDNLGRYVHVACLEESKSGNFFTRWFSR 560
           SYV+VDG YVEEGWVDKTCKVCKKDT+ E RQVDNLGRYVHVACLE+SK+GNFFTR FSR
Sbjct: 120 SYVEVDGAYVEEGWVDKTCKVCKKDTKGEARQVDNLGRYVHVACLEKSKTGNFFTRLFSR 179


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