BLASTX nr result

ID: Cimicifuga21_contig00017021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017021
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603970.1| Lamin-like protein [Medicago truncatula] gi|...   135   4e-30
ref|XP_003518469.1| PREDICTED: lamin-like protein-like [Glycine ...   134   2e-29
ref|XP_003617110.1| Early nodulin-like protein [Medicago truncat...   133   2e-29
ref|XP_003518470.1| PREDICTED: lamin-like protein-like [Glycine ...   130   2e-28
ref|XP_003556825.1| PREDICTED: lamin-like protein-like [Glycine ...   128   9e-28

>ref|XP_003603970.1| Lamin-like protein [Medicago truncatula]
           gi|355493018|gb|AES74221.1| Lamin-like protein [Medicago
           truncatula]
          Length = 167

 Score =  135 bits (341), Expect = 4e-30
 Identities = 62/107 (57%), Positives = 77/107 (71%)
 Frame = +2

Query: 131 LHKLGGNRYNGWKPDYNYTQWSMNEHFLVGDWLYFGYERSLYNVLQVNQTAYENCITEGP 310
           LH++GG RY  W P  N+T W+ NEHF  GDWLYFG+++ +YNVL+VN+T YE C+ +G 
Sbjct: 29  LHRVGGGRYT-WDPKINFTNWASNEHFYQGDWLYFGFDKHIYNVLEVNKTNYEKCVDKGF 87

Query: 311 IKNVTGGAGRDVFQLVEPKMYYFLSAGGWCNHGMKVAILTENAPPVN 451
           I N+T G GRDVFQL+E K YYFL   G+C HGMKV I  E  PP N
Sbjct: 88  ISNITRG-GRDVFQLLEAKTYYFLCGRGFCFHGMKVDINVEPLPPDN 133


>ref|XP_003518469.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 179

 Score =  134 bits (336), Expect = 2e-29
 Identities = 62/108 (57%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +2

Query: 131 LHKLGGNRYNGWKPDYNYTQWSMNEHFLVGDWLYFGYERSLYNVLQVNQTAYENCITEGP 310
           LH +GG++ + W P+ N T+WS +EHF + DWLYFGY+R+ YNVL+VN+T YENC+  G 
Sbjct: 26  LHYVGGDK-SSWGPNVNLTEWSSHEHFHLEDWLYFGYDRNEYNVLEVNKTGYENCVDTGF 84

Query: 311 IKNVTGGAGRDVFQLVEPKMYYFLSAGGWCNHGMKVAI-LTENAPPVN 451
           ++N++ GAGRDVF L E K YYFLS GG+C HGMKVAI +TE     N
Sbjct: 85  VQNISRGAGRDVFHLTEFKTYYFLSGGGYCWHGMKVAISVTEGVSAPN 132


>ref|XP_003617110.1| Early nodulin-like protein [Medicago truncatula]
           gi|355518445|gb|AET00069.1| Early nodulin-like protein
           [Medicago truncatula]
          Length = 300

 Score =  133 bits (335), Expect = 2e-29
 Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
 Frame = +2

Query: 134 HKLGGNRYNGWKPDYNYTQWSMNEHFLVGDWLYFGYERSLYNVLQVNQTAYENCITEGPI 313
           H +GG R  GW P  N T+WS+NEHF V DWL+FGY++  +NVL+VN+T+YENCI  G I
Sbjct: 182 HFVGGGR-QGWNPSNNLTKWSLNEHFHVNDWLFFGYDKLYFNVLEVNKTSYENCIDTGFI 240

Query: 314 KNVTGGAGRDVFQLVEPKMYYFLSAGGWCNHGMKVAI-LTENAPP 445
           KN+T G GRDVF L E K YYF+S GG+C  G+KVAI + E+  P
Sbjct: 241 KNITRGGGRDVFLLTEAKTYYFISGGGFCQRGVKVAIDVNEHVAP 285


>ref|XP_003518470.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 182

 Score =  130 bits (326), Expect = 2e-28
 Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = +2

Query: 131 LHKLGGNRYNGWKPDYNYTQWSMNEHFLVGDWLYFGYERSLYNVLQVNQTAYENCITEGP 310
           LH +GGN+   W  + N+T+WS +EHF + DW+YFGYER  Y+VL+VN+T+YENCI +G 
Sbjct: 11  LHYVGGNKTT-WAANVNFTEWSSSEHFHLMDWIYFGYERHEYSVLEVNKTSYENCIEKGF 69

Query: 311 IKNVTGGAGRDVFQLVEPKMYYFLSAGGWCNHGMKVAI-LTEN-APPVNINEAKSSSP 478
           I+NV+ GAGRDVFQL E K YYFLS GG C  G+KVAI +TE  A P      K+ +P
Sbjct: 70  IQNVSRGAGRDVFQLTEFKTYYFLSGGGHCWDGVKVAITVTEGVASPTPAPSPKTGAP 127


>ref|XP_003556825.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 163

 Score =  128 bits (321), Expect = 9e-28
 Identities = 60/116 (51%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
 Frame = +2

Query: 131 LHKLGGNRYNGWKPDYNYTQWSMNEHFLVGDWLYFGYERSLYNVLQVNQTAYENCITEGP 310
           LH++GG RY  W P  N+T+W+ +EHF  GDWLYFG+++ +YNVL+VN+T YENCI  G 
Sbjct: 29  LHRVGGGRYT-WSPKVNFTKWASHEHFYKGDWLYFGFDKRIYNVLEVNKTNYENCIDTGF 87

Query: 311 IKNVTGGAGRDVFQLVEPKMYYFLSAGGWCNHGMKVAI-----LTENAPPVNINEA 463
           I+N+T G GRDVFQL+E + YYF+   G+C+ GMK+ I      T   PP+  N+A
Sbjct: 88  IENITRG-GRDVFQLLEARHYYFICGRGFCSQGMKLLIDVKEPTTTLPPPILPNKA 142


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