BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016982
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   132   2e-29
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab...   132   3e-29
gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D...   131   5e-29
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]...   131   5e-29

>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/78 (75%), Positives = 67/78 (85%)
 Frame = -3

Query: 235 WVRELAAENPNIETCQFFENFEKVVDNVLLPAGVYTLQDLRVFGKQKGWCPYFLARRMVP 56
           WVR LAAENPN+ETC+FFEN+E+     +LP GVYTLQDLR +GK+KGWCPYFLAR MV 
Sbjct: 141 WVRALAAENPNVETCEFFENYERAASGAVLPPGVYTLQDLRAYGKEKGWCPYFLARHMVQ 200

Query: 55  KANVVVYSYQYMLDPKVA 2
            ANVVVYSYQY+LDPKVA
Sbjct: 201 LANVVVYSYQYLLDPKVA 218


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/78 (76%), Positives = 64/78 (82%)
 Frame = -3

Query: 235 WVRELAAENPNIETCQFFENFEKVVDNVLLPAGVYTLQDLRVFGKQKGWCPYFLARRMVP 56
           WVR LA ENPNI TCQFFEN+EK     +LP GVYTLQDLR FG+ KGWCPYFLAR MV 
Sbjct: 141 WVRALAVENPNIPTCQFFENYEKAASEAVLPPGVYTLQDLRAFGRDKGWCPYFLARHMVQ 200

Query: 55  KANVVVYSYQYMLDPKVA 2
            ANVVVYSYQY+LDPKVA
Sbjct: 201 FANVVVYSYQYLLDPKVA 218


>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
           lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
           ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/78 (73%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 WVRELAAENPNIETCQFFENFEKVVDNVLLPAGVYTLQDLRVFGKQKGWCPYFLARRMVP 56
           WVR L+ ENPN+E C +FEN+EK  DN LLP GVYTL+DLR FGK +GWCPYFLAR MV 
Sbjct: 141 WVRALSTENPNVELCDYFENYEKAADNALLPPGVYTLEDLRAFGKNRGWCPYFLARHMVQ 200

Query: 55  KANVVVYSYQYMLDPKVA 2
            ANV+VYSYQY+LDPKVA
Sbjct: 201 FANVIVYSYQYLLDPKVA 218


>gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
           thaliana]
          Length = 758

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/78 (71%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 WVRELAAENPNIETCQFFENFEKVVDNVLLPAGVYTLQDLRVFGKQKGWCPYFLARRMVP 56
           WVR L+ ENPN+E C FFEN+EK  +N LLP GVYTL+DLR FGK +GWCPYFLAR M+ 
Sbjct: 141 WVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGWCPYFLARHMIQ 200

Query: 55  KANVVVYSYQYMLDPKVA 2
            ANV+VYSYQY+LDPKVA
Sbjct: 201 FANVIVYSYQYLLDPKVA 218


>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
           gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
           [Arabidopsis thaliana]
           gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
           repair helicase UVH6; AltName: Full=ERCC2 homolog;
           AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
           AltName: Full=UV hypersensitive protein 6; AltName:
           Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
           similarity to nucleotide excision repair protein
           [Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
           putative DNA repair protein [Arabidopsis thaliana]
           gi|22651570|gb|AAM10793.1| DNA repair/transcription
           factor protein [Arabidopsis thaliana]
           gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
           thaliana] gi|332189421|gb|AEE27542.1| DNA repair
           helicase UVH6 [Arabidopsis thaliana]
           gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6
           [Arabidopsis thaliana]
          Length = 758

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/78 (71%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 WVRELAAENPNIETCQFFENFEKVVDNVLLPAGVYTLQDLRVFGKQKGWCPYFLARRMVP 56
           WVR L+ ENPN+E C FFEN+EK  +N LLP GVYTL+DLR FGK +GWCPYFLAR M+ 
Sbjct: 141 WVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGWCPYFLARHMIQ 200

Query: 55  KANVVVYSYQYMLDPKVA 2
            ANV+VYSYQY+LDPKVA
Sbjct: 201 FANVIVYSYQYLLDPKVA 218