BLASTX nr result
ID: Cimicifuga21_contig00016964
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00016964 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putativ... 59 5e-07 ref|XP_002322017.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann... 57 2e-06 ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|2... 55 4e-06 ref|XP_002865954.1| hypothetical protein ARALYDRAFT_918383 [Arab... 54 1e-05 >ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis] gi|223547481|gb|EEF48976.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis] Length = 838 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/56 (50%), Positives = 40/56 (71%) Frame = -3 Query: 170 MSYREEKFVRFQDWSSDKSLISERGFSNEDGLESGRFRSTVSSVSERIRRGFAWGS 3 M+Y +EKFVRFQDW S+KS+ E +S DG+ S + R +++SVSE+ +RG GS Sbjct: 1 MNYSQEKFVRFQDWRSEKSM--ETQYSVSDGIHSRKIRMSITSVSEKFQRGLESGS 54 >ref|XP_002322017.1| predicted protein [Populus trichocarpa] gi|222869013|gb|EEF06144.1| predicted protein [Populus trichocarpa] Length = 708 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/56 (48%), Positives = 41/56 (73%) Frame = -3 Query: 170 MSYREEKFVRFQDWSSDKSLISERGFSNEDGLESGRFRSTVSSVSERIRRGFAWGS 3 M+ +EKFVRFQDW S+K+ +E +S +G+ G+ R+T+SSVSE+++RG GS Sbjct: 1 MNQPQEKFVRFQDWKSEKT--TEGRYSASNGIYPGKIRTTISSVSEKVQRGLESGS 54 >ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera] gi|302143681|emb|CBI22542.3| unnamed protein product [Vitis vinifera] Length = 709 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/56 (50%), Positives = 39/56 (69%) Frame = -3 Query: 170 MSYREEKFVRFQDWSSDKSLISERGFSNEDGLESGRFRSTVSSVSERIRRGFAWGS 3 M+YR+EKFVRFQDWSS++S SE +G+ SG+ R ++SVS + +RG GS Sbjct: 1 MNYRQEKFVRFQDWSSERS--SEGKIPINNGVRSGKIRLAINSVSGKFQRGLECGS 54 >ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|222858433|gb|EEE95980.1| predicted protein [Populus trichocarpa] Length = 709 Score = 55.5 bits (132), Expect = 4e-06 Identities = 27/56 (48%), Positives = 40/56 (71%) Frame = -3 Query: 170 MSYREEKFVRFQDWSSDKSLISERGFSNEDGLESGRFRSTVSSVSERIRRGFAWGS 3 M++ +EKFVRFQDW S+KS +E +S + + G+ R+T+SSVSE+ +RG GS Sbjct: 1 MNHPQEKFVRFQDWKSEKS--TEGNYSASNVMYPGKIRTTISSVSEKFQRGLESGS 54 >ref|XP_002865954.1| hypothetical protein ARALYDRAFT_918383 [Arabidopsis lyrata subsp. lyrata] gi|297311789|gb|EFH42213.1| hypothetical protein ARALYDRAFT_918383 [Arabidopsis lyrata subsp. lyrata] Length = 716 Score = 54.3 bits (129), Expect = 1e-05 Identities = 24/52 (46%), Positives = 39/52 (75%) Frame = -3 Query: 170 MSYREEKFVRFQDWSSDKSLISERGFSNEDGLESGRFRSTVSSVSERIRRGF 15 M++R+EKFVRFQDW SDK+ S+ ++ + +++G FR T+SS+S++ R F Sbjct: 1 MNFRQEKFVRFQDWKSDKT-SSDVEYTGRNEIQTGIFRRTISSISDKFYRSF 51