BLASTX nr result

ID: Cimicifuga21_contig00016961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016961
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282933.1| PREDICTED: thylakoid lumenal 15 kDa protein ...   265   9e-69
ref|XP_004138481.1| PREDICTED: thylakoid lumenal 15 kDa protein ...   261   1e-67
emb|CAN74472.1| hypothetical protein VITISV_013914 [Vitis vinifera]   259   6e-67
gb|ACU23086.1| unknown [Glycine max]                                  258   2e-66
ref|NP_001240959.1| uncharacterized protein LOC100806792 [Glycin...   256   5e-66

>ref|XP_002282933.1| PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Vitis
           vinifera] gi|296086195|emb|CBI31636.3| unnamed protein
           product [Vitis vinifera]
          Length = 221

 Score =  265 bits (678), Expect = 9e-69
 Identities = 148/227 (65%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
 Frame = -2

Query: 893 LLNVSPFHSKLT-----QNHSVFLKSHVSSQRRHFCMCSLPHHQERSPDLQRLQAPAHVF 729
           LLNVS   SKL      + H  F K H++S   H    + P     + D        H+ 
Sbjct: 4   LLNVS-LSSKLPPFPILKPHLSFPKPHLNSSLFHNTNSATPQGNGINFD--------HLH 54

Query: 728 LSFGRATXXXXXXXXXXXXXXXXXFKGGGPYGSEVTRGQDLTGKDFSGKTLIKQDFKTSI 549
           LS  R +                 FKGGGPYG+EVTRGQDLTGKDFSGK+LIKQDFKTSI
Sbjct: 55  LSVTRGSFVALLSASLFFVDPALAFKGGGPYGAEVTRGQDLTGKDFSGKSLIKQDFKTSI 114

Query: 548 LRQTKFKGAKLLGASFFDADLTGSDLSDADLRGADFSLANVTKVNLSNANLEGATVTGNT 369
           LRQ  FKGA LLGASFFDADLTG+DLSDADLRGADFSLANVTK NLSNANLEGA  TGNT
Sbjct: 115 LRQANFKGANLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNT 174

Query: 368 SFKGSVIIGADFTDVPFREDQREYLCKVADGVNPTTGNSTKETLLCN 228
           SF+GS+I GADFTDVP REDQREYLCKVADGVNPTTGN+T+ETLLCN
Sbjct: 175 SFRGSIITGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 221


>ref|XP_004138481.1| PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic-like
           [Cucumis sativus]
          Length = 214

 Score =  261 bits (668), Expect = 1e-67
 Identities = 134/177 (75%), Positives = 144/177 (81%)
 Frame = -2

Query: 758 QRLQAPAHVFLSFGRATXXXXXXXXXXXXXXXXXFKGGGPYGSEVTRGQDLTGKDFSGKT 579
           Q+LQA  +  LS G+ T                 FKGGGPYG+ VTRGQDL+GKDFSGKT
Sbjct: 38  QQLQATRNFVLSLGQPTFLAFVSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKT 97

Query: 578 LIKQDFKTSILRQTKFKGAKLLGASFFDADLTGSDLSDADLRGADFSLANVTKVNLSNAN 399
           LIKQDFKTSILRQ  FKGA LLGASFFDADLTG+DLSDADLRGADFSLANVTK NLSNAN
Sbjct: 98  LIKQDFKTSILRQANFKGANLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 157

Query: 398 LEGATVTGNTSFKGSVIIGADFTDVPFREDQREYLCKVADGVNPTTGNSTKETLLCN 228
           LEGA  TGNTSF+GS I GADFTDVP REDQREYLCKVADGVNPTTGN+T+ETLLC+
Sbjct: 158 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 214


>emb|CAN74472.1| hypothetical protein VITISV_013914 [Vitis vinifera]
          Length = 221

 Score =  259 bits (662), Expect = 6e-67
 Identities = 131/170 (77%), Positives = 140/170 (82%)
 Frame = -2

Query: 737 HVFLSFGRATXXXXXXXXXXXXXXXXXFKGGGPYGSEVTRGQDLTGKDFSGKTLIKQDFK 558
           H+ LS  R +                 FKGGGPYG+EVTRGQDLTGKDFSGK+LIKQDFK
Sbjct: 52  HLHLSVTRGSFVALLSASLFFVDPALAFKGGGPYGAEVTRGQDLTGKDFSGKSLIKQDFK 111

Query: 557 TSILRQTKFKGAKLLGASFFDADLTGSDLSDADLRGADFSLANVTKVNLSNANLEGATVT 378
           TSILRQ  FK A LLGASFFDADLTG+DLSDADLRGADFSLANVTK NLSNANLEGA  T
Sbjct: 112 TSILRQANFKXANLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALAT 171

Query: 377 GNTSFKGSVIIGADFTDVPFREDQREYLCKVADGVNPTTGNSTKETLLCN 228
           GNTSF+GS+I GADFTDVP REDQREYLCKVADGVNPTTGN+T+ETLLCN
Sbjct: 172 GNTSFRGSIITGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 221


>gb|ACU23086.1| unknown [Glycine max]
          Length = 222

 Score =  258 bits (658), Expect = 2e-66
 Identities = 125/142 (88%), Positives = 132/142 (92%)
 Frame = -2

Query: 653 KGGGPYGSEVTRGQDLTGKDFSGKTLIKQDFKTSILRQTKFKGAKLLGASFFDADLTGSD 474
           KGGGPYG EVTRGQDLTGKDFSGKTLIKQDFKTSILRQ  FKGAKL+GASFFDADLTG+D
Sbjct: 81  KGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGAD 140

Query: 473 LSDADLRGADFSLANVTKVNLSNANLEGATVTGNTSFKGSVIIGADFTDVPFREDQREYL 294
           LSDADLR ADFSLANVTK NLSNANLEGA VTGNTSF+GS + GADFTDVP REDQREYL
Sbjct: 141 LSDADLRNADFSLANVTKANLSNANLEGALVTGNTSFRGSNVTGADFTDVPLREDQREYL 200

Query: 293 CKVADGVNPTTGNSTKETLLCN 228
           CKVADGVNPTTGN+T++TL CN
Sbjct: 201 CKVADGVNPTTGNATRDTLFCN 222


>ref|NP_001240959.1| uncharacterized protein LOC100806792 [Glycine max]
           gi|255626639|gb|ACU13664.1| unknown [Glycine max]
          Length = 222

 Score =  256 bits (654), Expect = 5e-66
 Identities = 124/142 (87%), Positives = 131/142 (92%)
 Frame = -2

Query: 653 KGGGPYGSEVTRGQDLTGKDFSGKTLIKQDFKTSILRQTKFKGAKLLGASFFDADLTGSD 474
           KGGGPYG EVTRGQDLTGKDFSGKTLIKQDFKTSILRQ  FKGAKL+GASFFDADLTG+D
Sbjct: 81  KGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGAD 140

Query: 473 LSDADLRGADFSLANVTKVNLSNANLEGATVTGNTSFKGSVIIGADFTDVPFREDQREYL 294
           LSDADLR ADFSLANVTK NLSNANLEGA  TGNTSF+GS + GADFTDVP REDQREYL
Sbjct: 141 LSDADLRNADFSLANVTKANLSNANLEGALATGNTSFRGSNVTGADFTDVPLREDQREYL 200

Query: 293 CKVADGVNPTTGNSTKETLLCN 228
           CKVADGVNPTTGN+T++TL CN
Sbjct: 201 CKVADGVNPTTGNATRDTLFCN 222


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