BLASTX nr result

ID: Cimicifuga21_contig00016950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016950
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...    69   4e-10
ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]      66   3e-09
ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatul...    66   3e-09

>ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|222864087|gb|EEF01218.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/72 (47%), Positives = 51/72 (70%)
 Frame = +3

Query: 267 LGMHKQEENDVTERITSEEELRHFCKMYRTFYLHSHGGRNVGSVIDEDYKVYGVEGLRVV 446
           L + K+ +N++   ++S++ELR+FCK     Y H HGG  VGSV+D+DYKV+G++GLRV+
Sbjct: 402 LFLGKEPQNNL---MSSQDELRNFCKKNVRTYYHYHGGSTVGSVVDDDYKVHGIKGLRVI 458

Query: 447 DASTLNALMGTS 482
           D ST     GT+
Sbjct: 459 DGSTFLESPGTN 470


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223538333|gb|EEF39940.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 537

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = +3

Query: 309 ITSEEELRHFCKMYRTFYLHSHGGRNVGSVIDEDYKVYGVEGLRVVDASTLNALMGTS 482
           ++S  ELR FCK     Y H HGG  VGSV+D DYKVYGV+GLRV+D ST     GT+
Sbjct: 448 LSSPHELRDFCKKNVRTYYHYHGGCTVGSVVDNDYKVYGVKGLRVIDGSTFLESPGTN 505


>ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|222864088|gb|EEF01219.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +3

Query: 312 TSEEELRHFCKMYRTFYLHSHGGRNVGSVIDEDYKVYGVEGLRVVDASTLNALMGTS 482
           ++  ELR+FC+     Y H HGG ++GSVID DYKV GV+GLRV+D STL+   GT+
Sbjct: 450 SNPNELRNFCRKNVRTYYHFHGGCSIGSVIDNDYKVIGVKGLRVIDGSTLSESPGTN 506


>ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 559

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +3

Query: 264 WLGMHKQEENDVTERITSEE-ELRHFCKM-YRTFYLHSHGGRNVGSVIDEDYKVYGVEGL 437
           +LG  KQE      ++TS + +LR+FCK   RT Y H HGG  VGSV+DE YKVYG++GL
Sbjct: 459 FLGESKQE------KLTSTDIDLRNFCKKNVRTIY-HYHGGCTVGSVVDEHYKVYGIKGL 511

Query: 438 RVVDASTLNALMGTS 482
           R++D ST +   GT+
Sbjct: 512 RILDGSTFSESPGTN 526


>ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatula]
           gi|355515154|gb|AES96777.1| (R)-mandelonitrile lyase
           [Medicago truncatula]
          Length = 543

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 288 ENDVTERITSEEELRHFCKM-YRTFYLHSHGGRNVGSVIDEDYKVYGVEGLRVVDASTLN 464
           E+  ++ +++E +LR FCK   RT Y H HGG NVG+V+D+DYKV+G++GL+V+D ST +
Sbjct: 447 ESQQSKLVSTEFDLRKFCKKNVRTIY-HYHGGCNVGTVLDKDYKVHGIKGLKVLDGSTFS 505

Query: 465 ALMGTS 482
              GT+
Sbjct: 506 ESPGTN 511


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