BLASTX nr result

ID: Cimicifuga21_contig00016926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016926
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]...   110   9e-23
ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]...   107   1e-21
ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus ...   106   2e-21
emb|CAN70560.1| hypothetical protein VITISV_031619 [Vitis vinifera]   102   3e-20
gb|AFD33347.1| acyl-activating enzyme 3 [Cannabis sativa]             102   3e-20

>ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224127626|ref|XP_002329324.1| acyl:coa ligase
           [Populus trichocarpa] gi|222870777|gb|EEF07908.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222870778|gb|EEF07909.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 543

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
 Frame = -3

Query: 260 TVNPLYTVGELSKQVKDSGPKLVITIPQLWEKVKGFGLPAVILG----SSQLVCKTRIIN 93
           T NPLYT  ELSKQ+KDS PKLVIT+P+LW+KVKGF LPAV LG    S  L   +RI +
Sbjct: 108 TANPLYTTSELSKQIKDSNPKLVITVPELWDKVKGFNLPAVFLGPKEVSLPLESGSRIRS 167

Query: 92  FNELIKMAGSSSEFPLNSVKQTDAAALLYS 3
           F+ L+++ GS+SEFP++ VKQ+D A LLYS
Sbjct: 168 FHSLVELGGSNSEFPVSDVKQSDIATLLYS 197


>ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|222848246|gb|EEE85793.1| 4-coumarate-coa ligase
           [Populus trichocarpa]
          Length = 543

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 4/90 (4%)
 Frame = -3

Query: 260 TVNPLYTVGELSKQVKDSGPKLVITIPQLWEKVKGFGLPAVILG----SSQLVCKTRIIN 93
           T NPLYT  ELSKQ+KDS PKL+IT+P+LW+KVKGF LPAV LG    S  L   +RI +
Sbjct: 108 TANPLYTTSELSKQIKDSNPKLIITVPELWDKVKGFNLPAVFLGPKRVSLPLESGSRITS 167

Query: 92  FNELIKMAGSSSEFPLNSVKQTDAAALLYS 3
           F+ L+ + GS+S+FP ++VKQ+D + LLYS
Sbjct: 168 FDSLVGLGGSNSQFPSSNVKQSDISTLLYS 197


>ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223537002|gb|EEF38638.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 542

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
 Frame = -3

Query: 260 TVNPLYTVGELSKQVKDSGPKLVITIPQLWEKVKGFGLPAVILGSSQLVC---KTRIINF 90
           T NPLYT  E+SKQ+KDS PKLVIT+P+LW KVK F LPAV LG+ + +     +RI +F
Sbjct: 108 TANPLYTTTEISKQIKDSNPKLVITVPELWNKVKDFNLPAVFLGAKESLLIEPNSRIKSF 167

Query: 89  NELIKMAGSSSEFPLNSVKQTDAAALLYS 3
           + L+++ GS+SEFP  +VKQTD A LLYS
Sbjct: 168 DHLVELGGSNSEFPTINVKQTDIATLLYS 196


>emb|CAN70560.1| hypothetical protein VITISV_031619 [Vitis vinifera]
          Length = 663

 Score =  102 bits (255), Expect = 3e-20
 Identities = 56/91 (61%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
 Frame = -3

Query: 260 TVNPLYTVGELSKQVKDSGPKLVITIPQLWEKVKGFGLPAVILGSSQLVCKT-----RII 96
           T NPLYTV E  KQVKDS PKLVITIPQLWEKVK   LPAVIL S+     T     +I 
Sbjct: 191 TANPLYTVAEXQKQVKDSNPKLVITIPQLWEKVKALNLPAVILDSADTSKDTIQSPLKIT 250

Query: 95  NFNELIKMAGSSSEFPLNSVKQTDAAALLYS 3
            F++L+KMAG  S FP  S+ Q D AALLYS
Sbjct: 251 YFSDLVKMAGEVSHFPKASITQGDTAALLYS 281


>gb|AFD33347.1| acyl-activating enzyme 3 [Cannabis sativa]
          Length = 543

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 4/90 (4%)
 Frame = -3

Query: 260 TVNPLYTVGELSKQVKDSGPKLVITIPQLWEKVKGFGLPAVILG--SSQLVCKTRIINFN 87
           T NPLYTV ELSKQVKDS PKL+IT+PQL EKVKGF LP +++G  S Q     +++ FN
Sbjct: 108 TSNPLYTVSELSKQVKDSNPKLIITVPQLLEKVKGFNLPTILIGPDSEQESSSDKVMTFN 167

Query: 86  ELIKMAGSS-SEFPL-NSVKQTDAAALLYS 3
           +L+ + GSS SEFP+ +  KQ+D AALLYS
Sbjct: 168 DLVNLGGSSGSEFPIVDDFKQSDTAALLYS 197


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