BLASTX nr result

ID: Cimicifuga21_contig00016891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016891
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894565.1| LEM3 (ligand-effect modulator 3) family prot...   131   2e-28
ref|NP_564656.1| ALA-interacting subunit 3 [Arabidopsis thaliana...   130   3e-28
gb|AAD30230.1|AC007202_12 T8K14.13 [Arabidopsis thaliana]             130   3e-28
ref|NP_974175.1| ALA-interacting subunit 5 [Arabidopsis thaliana...   130   3e-28
ref|XP_002887786.1| LEM3 (ligand-effect modulator 3) family prot...   130   3e-28

>ref|XP_002894565.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297340407|gb|EFH70824.1| LEM3
           (ligand-effect modulator 3) family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 349

 Score =  131 bits (329), Expect = 2e-28
 Identities = 63/109 (57%), Positives = 76/109 (69%)
 Frame = +1

Query: 1   LSEQEALMVWMRPAPFPTIRKLYGKIETDLVAGDVLTLVIQNNYNVYSFEXXXXXXXXXX 180
           LSEQE L+VWMR A  PT RKLYGKIE+DL  GD++ + ++NNYN YSF           
Sbjct: 236 LSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDIIHVTLKNNYNTYSFNGKKKLVLSTT 295

Query: 181 XXXXXXNNSLGIMYLTVGGLCFVLMLFFTILHLVKPRKLGDPSLLSWNK 327
                 N+ LGI YLTVGG+CF L L FTI++LVKPR+LGDPS LSWN+
Sbjct: 296 SWLGGKNDFLGIAYLTVGGICFFLALAFTIMYLVKPRRLGDPSYLSWNR 344


>ref|NP_564656.1| ALA-interacting subunit 3 [Arabidopsis thaliana]
           gi|75206681|sp|Q9SLK2.1|ALIS3_ARATH RecName:
           Full=ALA-interacting subunit 3; Short=AtALIS3
           gi|4585976|gb|AAD25612.1|AC005287_14 Unknown protein
           [Arabidopsis thaliana]
           gi|17386112|gb|AAL38602.1|AF446869_1 At1g54320/F20D21_50
           [Arabidopsis thaliana] gi|15010742|gb|AAK74030.1|
           At1g54320/F20D21_50 [Arabidopsis thaliana]
           gi|15450729|gb|AAK96636.1| At1g54320/F20D21_50
           [Arabidopsis thaliana] gi|332194959|gb|AEE33080.1|
           ALA-interacting subunit 3 [Arabidopsis thaliana]
          Length = 349

 Score =  130 bits (327), Expect = 3e-28
 Identities = 63/109 (57%), Positives = 75/109 (68%)
 Frame = +1

Query: 1   LSEQEALMVWMRPAPFPTIRKLYGKIETDLVAGDVLTLVIQNNYNVYSFEXXXXXXXXXX 180
           LSEQE L+VWMR A  PT RKLYGKIE+DL  GD + + + NNYN YSF           
Sbjct: 236 LSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTT 295

Query: 181 XXXXXXNNSLGIMYLTVGGLCFVLMLFFTILHLVKPRKLGDPSLLSWNK 327
                 N+ LGI YLTVGG+CF+L L FTI++LVKPR+LGDPS LSWN+
Sbjct: 296 SWLGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNR 344


>gb|AAD30230.1|AC007202_12 T8K14.13 [Arabidopsis thaliana]
          Length = 335

 Score =  130 bits (326), Expect = 3e-28
 Identities = 63/109 (57%), Positives = 75/109 (68%)
 Frame = +1

Query: 1   LSEQEALMVWMRPAPFPTIRKLYGKIETDLVAGDVLTLVIQNNYNVYSFEXXXXXXXXXX 180
           LSEQE L+VWMR A  PT RKLYGKIETDL AGD +T+++QNNYN YSF           
Sbjct: 221 LSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTT 280

Query: 181 XXXXXXNNSLGIMYLTVGGLCFVLMLFFTILHLVKPRKLGDPSLLSWNK 327
                 N+ LGI YLTVG +C  L + F +L+LVKPR+LGDPS LSWN+
Sbjct: 281 SWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 329


>ref|NP_974175.1| ALA-interacting subunit 5 [Arabidopsis thaliana]
           gi|332198124|gb|AEE36245.1| ALA-interacting subunit 5
           [Arabidopsis thaliana]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28
 Identities = 63/109 (57%), Positives = 75/109 (68%)
 Frame = +1

Query: 1   LSEQEALMVWMRPAPFPTIRKLYGKIETDLVAGDVLTLVIQNNYNVYSFEXXXXXXXXXX 180
           LSEQE L+VWMR A  PT RKLYGKIETDL AGD +T+++QNNYN YSF           
Sbjct: 169 LSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTT 228

Query: 181 XXXXXXNNSLGIMYLTVGGLCFVLMLFFTILHLVKPRKLGDPSLLSWNK 327
                 N+ LGI YLTVG +C  L + F +L+LVKPR+LGDPS LSWN+
Sbjct: 229 SWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 277


>ref|XP_002887786.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333627|gb|EFH64045.1| LEM3
           (ligand-effect modulator 3) family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 345

 Score =  130 bits (326), Expect = 3e-28
 Identities = 63/109 (57%), Positives = 75/109 (68%)
 Frame = +1

Query: 1   LSEQEALMVWMRPAPFPTIRKLYGKIETDLVAGDVLTLVIQNNYNVYSFEXXXXXXXXXX 180
           LSEQE L+VWMR A  PT RKLYGKIETDL AGD +T+++QNNYN YSF           
Sbjct: 231 LSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTT 290

Query: 181 XXXXXXNNSLGIMYLTVGGLCFVLMLFFTILHLVKPRKLGDPSLLSWNK 327
                 N+ LGI YLTVG +C  L + F +L+LVKPR+LGDPS LSWN+
Sbjct: 291 SWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 339


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